##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934078.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 171697 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.390006814329894 30.0 28.0 31.0 25.0 33.0 2 28.41079343261676 31.0 28.0 31.0 16.0 34.0 3 28.64522385364916 31.0 28.0 33.0 16.0 34.0 4 33.38035609241862 35.0 32.0 37.0 28.0 37.0 5 34.24167574273284 35.0 35.0 37.0 32.0 37.0 6 32.851336948228564 35.0 32.0 37.0 26.0 37.0 7 34.18749308374637 35.0 33.0 35.0 32.0 37.0 8 33.017781324076715 35.0 32.0 37.0 26.0 37.0 9 35.3228070379797 37.0 34.0 39.0 30.0 39.0 10 35.076448627524066 37.0 34.0 39.0 30.0 39.0 11 35.21243236631974 37.0 34.0 39.0 30.0 39.0 12 35.090816962439646 37.0 34.0 39.0 30.0 39.0 13 34.670850393425624 37.0 33.0 39.0 27.0 39.0 14 35.44045615240802 38.0 33.0 40.0 27.0 41.0 15 35.626068015166254 38.0 33.0 40.0 27.0 41.0 16 36.21092971921466 38.0 34.0 40.0 30.0 41.0 17 35.62829868896952 37.0 34.0 40.0 29.0 41.0 18 35.918926946888995 38.0 34.0 40.0 30.0 41.0 19 35.760630645847044 38.0 34.0 40.0 29.0 41.0 20 35.27317308980355 37.0 33.0 40.0 27.0 41.0 21 35.53664886398714 37.0 34.0 40.0 29.0 41.0 22 35.724730193305646 38.0 34.0 40.0 29.0 41.0 23 35.25005678608246 37.0 33.0 40.0 27.0 41.0 24 35.30587022487288 37.0 33.0 40.0 27.0 41.0 25 35.29058748842438 37.0 34.0 40.0 27.0 41.0 26 35.25643429995865 37.0 34.0 40.0 27.0 41.0 27 34.81854662574186 37.0 33.0 40.0 26.0 41.0 28 34.698824091277075 37.0 33.0 40.0 25.0 41.0 29 34.95725609649557 37.0 33.0 40.0 26.0 41.0 30 34.621967768802016 37.0 33.0 40.0 25.0 41.0 31 34.858028969638376 37.0 33.0 40.0 25.0 41.0 32 34.35559153625282 37.0 33.0 40.0 24.0 41.0 33 34.19723699307501 37.0 33.0 40.0 23.0 41.0 34 34.315398638298866 37.0 33.0 40.0 24.0 41.0 35 34.07937238274402 37.0 33.0 40.0 23.0 41.0 36 33.9198529968491 37.0 32.0 40.0 23.0 41.0 37 34.30255042312912 37.0 33.0 40.0 24.0 41.0 38 33.801353547237284 36.0 32.0 40.0 22.0 41.0 39 33.64424538576679 36.0 32.0 40.0 21.0 41.0 40 33.88440100875379 36.0 32.0 40.0 23.0 41.0 41 33.69982585601379 36.0 32.0 40.0 23.0 41.0 42 33.53025970168378 36.0 33.0 40.0 21.0 41.0 43 33.42358340565065 36.0 33.0 40.0 19.0 41.0 44 33.71967477591338 37.0 33.0 40.0 20.0 41.0 45 33.57496054095296 37.0 33.0 40.0 20.0 41.0 46 33.57687670722261 36.0 33.0 40.0 20.0 41.0 47 33.28567185215816 36.0 32.0 39.0 20.0 41.0 48 33.526392423862966 36.0 33.0 40.0 20.0 41.0 49 33.57910738102588 36.0 33.0 40.0 20.0 41.0 50 33.17537289527482 36.0 32.0 39.0 18.0 41.0 51 32.47017129012155 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 7.0 15 7.0 16 20.0 17 51.0 18 109.0 19 337.0 20 826.0 21 1493.0 22 2282.0 23 2994.0 24 3258.0 25 2990.0 26 2895.0 27 2964.0 28 3693.0 29 4722.0 30 6173.0 31 7807.0 32 9780.0 33 12472.0 34 16759.0 35 16446.0 36 18061.0 37 21177.0 38 23365.0 39 11004.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.57553131388434 3.691386570528314 43.120730123415086 13.612351992172256 2 16.003191669044885 23.364415219834942 43.65946988007944 16.972923231040728 3 17.914116146467325 22.796554395242783 42.188273528366835 17.101055929923064 4 16.99039587179741 4.161983028241611 57.10175483555333 21.74586626440765 5 32.86021304973296 5.026296324338806 40.44450398084999 21.66898664507825 6 17.544278583784227 22.971863224168157 43.600645322865276 15.883212869182339 7 69.0862391305614 1.8922869939486422 25.226998724497225 3.794475150992737 8 68.84919363762909 18.72484667757736 7.062441393850795 5.363518290942766 9 65.20556561850236 4.173631455412733 7.5842909311170255 23.036511994967878 10 48.52501790945677 21.682964757683592 14.715458045277435 15.076559287582194 11 40.13698550353239 19.6270173619807 22.657355690547885 17.578641443939034 12 26.764591111085224 16.70384456338783 26.314961822279948 30.216602503246996 13 28.736087409797488 22.860038323325394 32.10364770496864 16.300226561908477 14 18.48954844872071 35.000029121067925 25.730210778289663 20.780211651921697 15 14.604215565793229 20.17624070309906 38.02687292148378 27.19267080962393 16 16.124917732983103 20.27408749133648 29.328409931449006 34.27258484423141 17 17.597278927412827 28.11813834836951 30.024403454923497 24.260179269294163 18 17.68522455255479 20.862915484836662 29.88403990751149 31.567820055097062 19 20.279329283563488 24.60206060676657 25.590429652236207 29.528180457433734 20 29.486828540976255 21.24614873876655 32.36166036680897 16.905362353448226 21 22.530387834382662 34.52477329248618 24.55197236993075 18.392866503200406 22 19.438312841808536 20.364945223271228 35.43276819047508 24.763973744445156 23 25.158855425546168 27.971950587371943 26.135576043844676 20.733617943237213 24 20.80816787713239 27.60327786740595 26.5793811190644 25.009173136397255 25 17.52098172944198 36.00936533544558 24.401707659423284 22.067945275689148 26 16.802273772983803 24.38772954681794 33.58358037705958 25.22641630313867 27 26.74304152081865 27.719179717758607 23.10465529391894 22.4331234675038 28 15.516869834650576 32.31856118627582 31.298158966085605 20.866410012987995 29 18.510515617628727 20.64276021130247 33.959824574686806 26.886899596381998 30 16.561151330541595 33.55038235962189 28.10823718527406 21.780229124562457 31 22.756367321502413 25.01965672085127 21.880988019592653 30.34298793805366 32 28.994682492996382 26.00977303039657 23.395283551838414 21.600260924768634 33 26.101213183689868 22.03532967961001 24.79717176188285 27.066285374817266 34 21.224016727141418 23.4179979848221 25.53160509502204 29.82638019301444 35 23.919462774538868 20.67246370058883 26.711590767456624 28.69648275741568 36 22.170451434795016 29.876468429850263 22.744136472972738 25.208943662381987 37 17.258892118091754 22.596201447899496 27.288187912427126 32.85671852158163 38 18.411503986674198 27.007460817603103 25.710990873457312 28.870044322265386 39 19.420840201051853 26.452413262899178 27.737234779873848 26.38951175617512 40 19.111574459658584 19.562951012539532 32.41815523858891 28.907319289212975 41 20.06266853818063 21.783723652713793 28.181622276452124 29.971985532653456 42 22.544948368346564 20.096448976976884 31.65518325888047 25.703419395796086 43 25.412791137876606 22.713268140969266 23.618933353523943 28.255007367630185 44 21.123840253469776 21.59967850341008 31.87825063920744 25.398230603912708 45 18.931023838506206 24.144277418941506 27.199659865926602 29.725038876625682 46 25.99404765371556 26.751777841196994 23.5478779477801 23.70629655730735 47 15.838948845932077 26.678975171377484 35.015172076390385 22.46690390630005 48 20.50064939981479 25.168174167283063 29.08670506764824 25.244471365253908 49 20.73711247138855 19.036442104404852 36.206806175996086 24.01963924821051 50 23.557196689517 23.346360157719705 27.207813764946387 25.88862938781691 51 18.94966132198 22.154143636755446 28.41284355579888 30.483351485465676 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 36.0 1 88.0 2 140.0 3 197.0 4 254.0 5 211.0 6 168.0 7 181.5 8 195.0 9 231.5 10 268.0 11 245.5 12 223.0 13 271.0 14 319.0 15 297.5 16 276.0 17 302.0 18 328.0 19 343.0 20 358.0 21 561.5 22 765.0 23 660.5 24 556.0 25 767.0 26 1067.0 27 1156.0 28 1417.0 29 1678.0 30 1926.0 31 2174.0 32 2483.0 33 2792.0 34 3337.0 35 3882.0 36 4262.0 37 4642.0 38 4970.0 39 5298.0 40 5763.5 41 6229.0 42 7583.0 43 8937.0 44 9731.0 45 10525.0 46 19232.5 47 27940.0 48 23146.0 49 18352.0 50 17072.0 51 15792.0 52 13843.0 53 11894.0 54 11350.5 55 10807.0 56 9953.5 57 9100.0 58 7980.0 59 6860.0 60 6350.5 61 5841.0 62 4951.5 63 4062.0 64 3575.5 65 3089.0 66 2511.0 67 1933.0 68 1659.0 69 1385.0 70 1285.0 71 1185.0 72 899.0 73 613.0 74 471.5 75 218.0 76 106.0 77 133.5 78 161.0 79 107.0 80 53.0 81 30.5 82 8.0 83 6.5 84 5.0 85 3.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 171697.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.83225682452227 #Duplication Level Percentage of deduplicated Percentage of total 1 76.05371461009011 24.970150905374002 2 8.607109912722628 5.6518168634280155 3 2.9855247285886612 2.940645439349552 4 1.5291279358546797 2.0081888443012983 5 1.0838714255304052 1.779297250388766 6 0.8532604839281912 1.680868040792792 7 0.6971546157666927 1.6022411573877238 8 0.6936067551266586 1.8218140095633588 9 0.6208756120059604 1.8346272794515923 >10 6.7161001915844745 39.77530183986907 >50 0.08337472504080039 1.823561273639027 >100 0.060313630880579006 3.8771789839076973 >500 0.007095721280068119 1.680868040792792 >1k 0.007095721280068119 5.613959475121871 >5k 0.0017739303200170298 2.93948059663244 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGC 5047 2.93948059663244 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCG 4235 2.4665544534849184 No Hit GAATCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTC 2475 1.4414928624262509 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCACTTTGT 1918 1.117084165710525 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCACTTTGTCGTA 1011 0.5888279935001777 No Hit GCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGC 980 0.5707729313849398 TruSeq Adapter, Index 27 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTC 714 0.41584885000902755 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCT 657 0.3826508325713321 No Hit GAACTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCT 535 0.31159542682749264 No Hit CCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGC 362 0.21083653179729406 TruSeq Adapter, Index 27 (95% over 23bp) TTTCTCGGGATCTTAAGTACTGTAGAAAAGATGTCACTTCTTTAAGGCTGT 353 0.2055947395702895 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCCCCTGTCGAATGC 334 0.19452873375772436 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCCCCACATTGT 331 0.1927814696820562 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCACTTTGTCGT 322 0.18753967745505162 No Hit CTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGCT 293 0.17064945805692588 TruSeq Adapter, Index 20 (95% over 22bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGC 293 0.17064945805692588 No Hit TCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCGTCTTCTGC 277 0.16133071632002888 TruSeq Adapter, Index 27 (95% over 23bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATG 265 0.15434166001735616 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATGAATGAT 244 0.14211081148767887 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCCACTTTG 237 0.13803386197778644 No Hit TGTTTTTGGTTTTTGTTTTGTTTTCTTTTGTTTGTTTGTTTGTTTTTTACA 232 0.13512175518500613 No Hit TGCCTGGGGGATTTGTGTTCAACATTATTTGAACCATTTGCCATTAACGAA 228 0.13279206975078192 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGC 217 0.12638543480666523 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTAT 217 0.12638543480666523 No Hit GAATGATCCCTGTCTCTTATACACATCTGACGCCCACTTTGTCGTATGCCG 198 0.11531942899410007 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCCTTTGTCGTATGC 184 0.10716552997431521 No Hit TTTTTGGGAAGAATTTTATACTTTTAACTTATGTTTGACTCTGATCTCTTA 172 0.1001764736716425 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18870452017216374 0.0 2 0.0 0.0 0.0 1.2586125558396477 0.0 3 0.0 0.0 0.0 1.5218670099069873 0.0 4 0.0 0.0 0.0 2.238245280930942 0.0 5 0.0 0.0 0.0 4.528326062773374 0.0 6 0.0 0.0 0.0 4.88535035556824 0.0 7 0.0 0.0 0.0 5.626772745010105 0.0 8 0.0 0.0 0.0 6.579614087607821 0.0 9 0.0 0.0 0.0 6.810252945596021 0.0 10 0.0 0.0 0.0 10.031043058411038 0.0 11 0.0 0.0 0.0 10.876718871034438 0.0 12 0.0 0.0 0.0 15.308945409646062 0.0 13 0.0 0.0 0.0 15.77662976056658 0.0 14 0.0 0.0 0.0 16.035807265124028 0.0 15 0.0 0.0 0.0 16.92283499420491 0.0 16 0.0 0.0 0.0 17.51108056634653 0.0 17 0.0 0.0 0.0 18.148831953965416 0.0 18 0.0 0.0 0.0 18.755715009580832 0.0 19 0.0 0.0 0.0 20.567627856048738 0.0 20 0.0 0.0 0.0 21.126752360262557 0.0 21 0.0 0.0 0.0 21.698107713006053 0.0 22 0.0 0.0 0.0 22.31605677443403 0.0 23 0.0 0.0 0.0 22.945654263033134 0.0 24 0.0 0.0 0.0 23.434888204220226 0.0 25 0.0 0.0 0.0 23.8408358911338 0.0 26 0.0 0.0 0.0 24.235717572234808 0.0 27 0.0 0.0 0.0 24.65273126496095 0.0 28 0.0 0.0 0.0 25.040623889759285 0.0 29 0.0 0.0 0.0 25.466956324222323 0.0 30 0.0 0.0 0.0 25.929398882915834 0.0 31 0.0 0.0 0.0 26.448336313389284 0.0 32 0.0 0.0 0.0 26.8630203206812 0.0 33 0.0 0.0 0.0 27.29459454737124 0.0 34 0.0 0.0 0.0 27.710443397380267 0.0 35 0.0 0.0 0.0 28.196182810416023 0.0 36 0.0 0.0 0.0 28.644064835145635 0.0 37 0.0 0.0 0.0 29.0925292812338 0.0 38 0.0 0.0 0.0 29.52585077199951 0.0 39 0.0 0.0 0.0 29.962666790916558 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGGGC 70 0.0 45.000004 4 CCGCGTA 35 1.2038618E-7 45.000004 40 ACCCGTC 35 1.2038618E-7 45.000004 39 CGCGTAA 35 1.2038618E-7 45.000004 41 CACCGCG 70 0.0 45.000004 38 CTGTCGG 25 3.876906E-5 45.0 2 GTCGCCA 25 3.876906E-5 45.0 19 TCTTGCG 25 3.876906E-5 45.0 1 ACCGGTC 20 7.016509E-4 45.0 39 CGAACCC 20 7.016509E-4 45.0 34 ACTGCAC 20 7.016509E-4 45.0 24 GTCGAAG 25 3.876906E-5 45.0 43 GGATGTC 20 7.016509E-4 45.0 8 GGTCGAA 55 1.8189894E-12 45.0 42 CGACGGA 20 7.016509E-4 45.0 41 ACTGACG 25 3.876906E-5 45.0 43 GGCACCG 45 3.8016879E-10 45.0 8 CACATTG 55 1.8189894E-12 45.0 44 GGCAATT 20 7.016509E-4 45.0 8 GACCGGA 20 7.016509E-4 45.0 40 >>END_MODULE