##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934077.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 498123 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.19906930617538 31.0 30.0 31.0 27.0 34.0 2 30.537154477910075 31.0 30.0 33.0 27.0 34.0 3 30.594491721924104 31.0 31.0 34.0 27.0 34.0 4 34.13842765742598 35.0 33.0 37.0 30.0 37.0 5 34.52004424609986 35.0 35.0 37.0 32.0 37.0 6 34.08558528716803 35.0 35.0 37.0 30.0 37.0 7 34.4808812281304 35.0 35.0 37.0 32.0 37.0 8 34.69782162237038 35.0 35.0 37.0 32.0 37.0 9 36.02619232599177 38.0 35.0 39.0 31.0 39.0 10 35.400786552718905 37.0 34.0 39.0 30.0 39.0 11 35.538499527225206 37.0 35.0 39.0 30.0 39.0 12 35.56828935825087 37.0 35.0 39.0 30.0 39.0 13 35.60149802358052 37.0 35.0 39.0 30.0 39.0 14 36.378926490043625 38.0 35.0 40.0 30.0 41.0 15 36.61109404705264 38.0 35.0 40.0 31.0 41.0 16 36.71336999094601 38.0 35.0 40.0 31.0 41.0 17 36.472172535699016 38.0 35.0 40.0 30.0 41.0 18 36.559058706383766 38.0 35.0 40.0 31.0 41.0 19 36.5756369410768 38.0 35.0 40.0 31.0 41.0 20 36.641590530852824 38.0 35.0 40.0 31.0 41.0 21 36.31947330277863 38.0 35.0 40.0 30.0 41.0 22 36.50038444319977 38.0 35.0 40.0 30.0 41.0 23 36.601913583592804 38.0 35.0 40.0 31.0 41.0 24 36.5052587413149 38.0 35.0 40.0 30.0 41.0 25 36.02450800304342 38.0 34.0 40.0 30.0 41.0 26 36.139206581506976 38.0 34.0 40.0 30.0 41.0 27 36.20326706456036 38.0 35.0 40.0 30.0 41.0 28 36.09192508677576 38.0 35.0 40.0 30.0 41.0 29 36.17681175131443 38.0 35.0 40.0 30.0 41.0 30 35.75132246453185 38.0 34.0 40.0 29.0 41.0 31 35.9130335278636 38.0 34.0 40.0 30.0 41.0 32 35.995808264223896 38.0 34.0 40.0 30.0 41.0 33 36.01375764620385 38.0 34.0 40.0 30.0 41.0 34 35.93793902309269 38.0 34.0 40.0 29.0 41.0 35 35.95208613133704 38.0 34.0 40.0 29.0 41.0 36 35.761807826580984 38.0 34.0 40.0 29.0 41.0 37 35.84631105168803 38.0 34.0 40.0 29.0 41.0 38 35.73122702625657 38.0 34.0 40.0 29.0 41.0 39 35.668419245848916 38.0 34.0 40.0 29.0 41.0 40 35.58059555571616 38.0 34.0 40.0 29.0 41.0 41 35.46186785191609 38.0 34.0 40.0 28.0 41.0 42 35.675166575323765 38.0 34.0 40.0 29.0 41.0 43 35.625825348357736 38.0 34.0 40.0 29.0 41.0 44 35.544225020727815 38.0 34.0 40.0 29.0 41.0 45 35.638061282052824 38.0 34.0 40.0 29.0 41.0 46 35.54910333391552 37.0 34.0 40.0 29.0 41.0 47 35.51960058057949 37.0 34.0 40.0 29.0 41.0 48 35.488742740246884 37.0 34.0 40.0 29.0 41.0 49 35.45275162961759 37.0 34.0 40.0 29.0 41.0 50 35.281073148599845 37.0 34.0 40.0 28.0 41.0 51 34.14077446735043 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 3.0 11 4.0 12 8.0 13 7.0 14 25.0 15 28.0 16 44.0 17 92.0 18 201.0 19 347.0 20 513.0 21 892.0 22 1404.0 23 2039.0 24 2872.0 25 4053.0 26 5340.0 27 6807.0 28 8493.0 29 11076.0 30 14432.0 31 18349.0 32 23804.0 33 31608.0 34 44724.0 35 47035.0 36 57773.0 37 76023.0 38 92478.0 39 47644.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.47135747596477 4.792792141699941 55.55435103378081 17.181499348554475 2 20.395163443567153 3.95805855180347 54.287394880380944 21.359383124248428 3 21.6484683501866 3.7575056763088637 52.255768153648795 22.338257819855738 4 20.330922282247556 5.180246645908741 47.34694041431534 27.14189065752836 5 18.69076513230668 5.813825099423235 49.55302204475601 25.94238772351407 6 22.215998859719384 6.4733007710946895 52.952383246708145 18.358317122477782 7 85.28114541990632 2.267311487323412 8.366206740102344 4.085336352667915 8 87.44506878823101 2.859333939609293 5.61768880376935 4.077908468390337 9 81.57342664362015 5.5893825420629035 7.6258273558940255 5.21136345842292 10 40.953740341241016 26.76949267550384 16.596904780546172 15.67986220270897 11 30.940952335065834 26.580382756869287 23.153518307727207 19.325146600337668 12 29.49070811827601 22.180866974622734 28.20829393543362 20.120130971667642 13 25.54690307414032 23.798138210843504 29.09602648341875 21.558932231597417 14 21.369420805704614 25.37927379382201 29.69146174739974 23.55984365307364 15 20.14281613175862 26.08090772760945 32.2434418808206 21.53283425981133 16 23.21976700533804 24.314677298578864 31.086097208922293 21.3794584871608 17 23.077031175031067 24.47809075268558 28.896477376069768 23.548400696213587 18 23.427145504222853 24.63628461243508 29.759717981301808 22.17685190204026 19 25.60431861206971 27.154939643421404 26.351322866039112 20.889418878469776 20 28.043475205923034 25.939376419077213 26.848388851749466 19.16875952325028 21 26.797397429952042 26.75343238517394 26.433230346721594 20.015939838152423 22 24.973349955733827 24.68426472979565 27.057975640554645 23.284409673915878 23 24.343385067543558 25.475234028543152 28.034842799870713 22.146538104042577 24 24.49575707204847 24.690688845927614 28.403426462941884 22.410127619082036 25 23.50122359336951 25.876339779532366 26.50570240683526 24.116734220262867 26 22.513917245339 27.181840629723986 27.495217044786123 22.809025080150885 27 22.238483266181245 26.736970587585795 29.25943993752547 21.76510620870749 28 21.556523188047933 26.97646966713041 29.28192434398733 22.185082800834333 29 22.06463062336009 25.977519608610727 29.202024399596084 22.755825368433097 30 22.904784561242906 25.48466944911197 28.86134549097311 22.749200498672014 31 23.03567592743158 27.065805032090466 27.262342835002602 22.636176205475355 32 24.379319967156707 27.610248874274024 26.52236495805253 21.48806620051674 33 24.668204439465754 26.942743057437617 25.959050274731343 22.430002228365282 34 21.955420649116782 26.382640432182413 28.589725830768703 23.0722130879321 35 22.011832418900553 26.268010109952762 28.949074826900183 22.7710826442465 36 22.58096895746633 28.229573820120734 27.159155469633 22.030301752779934 37 23.2101308311401 28.917757260756883 27.377976925377865 20.49413498272515 38 22.976052099581832 27.255517211612396 26.727936674275227 23.040494014530548 39 22.340265356146976 26.286278690203023 27.151326078097178 24.222129875552824 40 23.173392917010457 25.234329673594676 28.369298345990853 23.22297906340402 41 20.639480610210732 26.468362231818244 28.81999024337362 24.0721669145974 42 22.56531017439468 26.17967851313832 27.300084517277863 23.95492679518914 43 22.79738136966171 25.217265615119157 28.2149188051947 23.770434210024433 44 22.06061555077762 24.852697024630462 28.54596153961973 24.540725884972186 45 22.204555902859333 25.214856571569673 27.071225380076807 25.509362145494187 46 21.516573215852308 26.558701364923927 28.034441292612467 23.8902841266113 47 20.44836315528494 26.342288952728545 29.73362000951572 23.475727882470796 48 21.592056580402833 24.635080090660338 30.558115164326882 23.214748164609947 49 22.269600078695422 24.5662215958709 29.533669394908486 23.630508930525192 50 20.857900558697352 25.16366439614312 28.697129022349905 25.28130602280963 51 20.254234395922293 25.259624630864263 27.82907033001889 26.65707064319455 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 89.0 1 296.5 2 504.0 3 818.0 4 1132.0 5 877.5 6 623.0 7 649.0 8 675.0 9 689.0 10 703.0 11 832.5 12 962.0 13 972.5 14 983.0 15 997.0 16 1011.0 17 1118.0 18 1225.0 19 1268.0 20 1311.0 21 1428.5 22 1546.0 23 1671.0 24 1796.0 25 2409.0 26 4131.5 27 5241.0 28 5991.5 29 6742.0 30 7732.5 31 8723.0 32 10219.5 33 11716.0 34 13777.5 35 15839.0 36 16704.0 37 17569.0 38 19115.5 39 20662.0 40 22357.0 41 24052.0 42 27017.5 43 29983.0 44 31264.5 45 32546.0 46 35497.0 47 38448.0 48 40445.0 49 42442.0 50 41738.5 51 41035.0 52 37985.0 53 34935.0 54 31513.0 55 28091.0 56 27320.0 57 26549.0 58 25570.5 59 24592.0 60 23653.5 61 22715.0 62 20324.0 63 17933.0 64 15112.0 65 12291.0 66 10173.0 67 8055.0 68 6329.5 69 4604.0 70 3822.5 71 3041.0 72 2496.0 73 1951.0 74 1645.0 75 1081.0 76 823.0 77 576.5 78 330.0 79 277.5 80 225.0 81 138.5 82 52.0 83 29.0 84 6.0 85 6.0 86 6.0 87 5.0 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 498123.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.675085178100716 #Duplication Level Percentage of deduplicated Percentage of total 1 74.41555500059084 25.803657082211263 2 9.081900951892921 6.298313781719219 3 3.1163308315523683 3.2417711108165945 4 1.6874027543969932 2.3404333695390998 5 1.131728766919851 1.9621395695726365 6 0.9423376185837804 1.9605382314552702 7 0.7578677539143641 1.8395390244501515 8 0.6794709781679455 1.884857123521674 9 0.6437357630456737 2.0089433174218554 >10 7.402937199484323 47.478769127986006 >50 0.10672205593366961 2.5050190879201386 >100 0.029905631058335987 1.617892604105563 >500 0.003518309536274822 0.7986781637459661 >1k 5.863849227124704E-4 0.25944840553458576 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 1276 0.25616163076188014 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGCT 906 0.1818827879860998 Illumina Single End Adapter 1 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 753 0.15116748273016906 Illumina Single End Adapter 1 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 615 0.12346348191109426 No Hit GCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 585 0.11744087303738233 Illumina Single End Adapter 1 (95% over 21bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 558 0.1120205250510416 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 511 0.10258510448222628 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19412875936264737 0.0 2 0.0 0.0 0.0 0.7827383999534252 0.0 3 0.0 0.0 0.0 1.0320744073250985 0.0 4 0.0 0.0 0.0 1.3952377224099268 0.0 5 0.0 0.0 0.0 1.99328278356952 0.0 6 0.0 0.0 0.0 2.366483780110535 0.0 7 0.0 0.0 0.0 2.6961212391317004 0.0 8 0.0 0.0 0.0 3.2116565587214403 0.0 9 0.0 0.0 0.0 3.4286712318041928 0.0 10 0.0 0.0 0.0 3.94621408768517 0.0 11 0.0 0.0 0.0 5.013621133736045 0.0 12 0.0 0.0 0.0 5.839521563951072 0.0 13 0.0 0.0 0.0 6.136235427795946 0.0 14 0.0 0.0 0.0 6.232195662517089 0.0 15 0.0 0.0 0.0 6.408457348887724 0.0 16 0.0 0.0 0.0 6.842085187794982 0.0 17 0.0 0.0 0.0 7.486504337282157 0.0 18 0.0 0.0 0.0 8.16685838638248 0.0 19 0.0 0.0 0.0 8.651276893458041 0.0 20 0.0 0.0 0.0 9.131078067063758 0.0 21 0.0 0.0 0.0 9.83993913149965 0.0 22 0.0 0.0 0.0 10.611033820963899 0.0 23 0.0 0.0 0.0 11.425491294318872 0.0 24 0.0 0.0 0.0 12.039195138550117 0.0 25 0.0 0.0 0.0 12.59528269122285 0.0 26 0.0 0.0 0.0 13.08712908257599 0.0 27 0.0 0.0 0.0 13.584797329173718 0.0 28 0.0 0.0 0.0 14.126229866920418 0.0 29 0.0 0.0 0.0 14.678503100639801 0.0 30 0.0 0.0 0.0 15.286786596884705 0.0 31 0.0 0.0 0.0 15.873990962071616 0.0 32 0.0 0.0 0.0 16.44132071797528 0.0 33 0.0 0.0 0.0 17.001824850488735 0.0 34 0.0 0.0 0.0 17.572567418087502 0.0 35 0.0 0.0 0.0 18.147525811897864 0.0 36 0.0 0.0 0.0 18.735332437972147 0.0 37 0.0 0.0 0.0 19.33598729631035 0.0 38 0.0 0.0 0.0 19.942263256264017 0.0 39 0.0 0.0 0.0 20.575640956149385 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGT 20 7.029432E-4 45.000004 37 CGTATTA 20 7.029432E-4 45.000004 35 CACGAAC 20 7.029432E-4 45.000004 43 TAACGCG 20 7.029432E-4 45.000004 34 ATTCCGG 30 2.1630149E-6 45.000004 2 ACGTATT 30 2.1630149E-6 45.000004 23 GCAATCA 30 2.1630149E-6 45.000004 9 GCTAACG 20 7.029432E-4 45.000004 32 CGATCAT 20 7.029432E-4 45.000004 10 CGCCCTA 20 7.029432E-4 45.000004 39 TTACTAG 25 3.8876122E-5 45.0 26 TCAGACG 85 0.0 42.352943 22 AAACACG 60 3.6379788E-12 41.250004 40 AGACACG 60 3.6379788E-12 41.250004 24 TATGACG 50 1.0786607E-9 40.5 19 TCGTTCA 95 0.0 40.263157 16 CTCGTAA 80 0.0 39.375004 33 TTTCGCG 190 0.0 39.078945 1 TTGGGAC 800 0.0 38.8125 5 TTCGGGC 290 0.0 38.793102 4 >>END_MODULE