##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934076.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 999960 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.877204088163527 31.0 30.0 31.0 25.0 34.0 2 29.658233329333175 31.0 30.0 33.0 25.0 34.0 3 29.744763790551623 31.0 30.0 33.0 25.0 34.0 4 33.821563862554505 35.0 33.0 37.0 28.0 37.0 5 34.41716368654746 35.0 35.0 37.0 32.0 37.0 6 33.625117004680185 35.0 33.0 37.0 28.0 37.0 7 34.354207168286734 35.0 35.0 37.0 32.0 37.0 8 34.0022510900436 35.0 35.0 37.0 28.0 37.0 9 35.75448117924717 37.0 35.0 39.0 31.0 39.0 10 35.32299291971679 37.0 34.0 39.0 30.0 39.0 11 35.45408916356654 37.0 35.0 39.0 30.0 39.0 12 35.45691327653106 37.0 35.0 39.0 30.0 39.0 13 35.38972558902356 37.0 35.0 39.0 30.0 39.0 14 36.10247109884396 38.0 35.0 40.0 29.0 41.0 15 36.27359394375775 38.0 35.0 40.0 30.0 41.0 16 36.557604304172166 38.0 35.0 40.0 31.0 41.0 17 36.144632785311416 38.0 34.0 40.0 30.0 41.0 18 36.32479299171967 38.0 35.0 40.0 30.0 41.0 19 36.259434377375094 38.0 35.0 40.0 30.0 41.0 20 36.05170306812273 38.0 34.0 40.0 29.0 41.0 21 35.93249229969199 38.0 34.0 40.0 29.0 41.0 22 36.125508020320815 38.0 34.0 40.0 30.0 41.0 23 36.00592723708948 38.0 34.0 40.0 30.0 41.0 24 35.989487579503184 38.0 34.0 40.0 30.0 41.0 25 35.67513800552022 38.0 34.0 40.0 29.0 41.0 26 35.716611664466576 38.0 34.0 40.0 29.0 41.0 27 35.59921296851874 38.0 34.0 40.0 28.0 41.0 28 35.48782951318053 38.0 34.0 40.0 27.0 41.0 29 35.630759230369215 38.0 34.0 40.0 29.0 41.0 30 35.18978659146366 37.0 34.0 40.0 27.0 41.0 31 35.40970438817553 38.0 34.0 40.0 27.0 41.0 32 35.19286471458858 38.0 34.0 40.0 26.0 41.0 33 35.11713168526741 38.0 34.0 40.0 26.0 41.0 34 34.989589583583346 38.0 34.0 40.0 25.0 41.0 35 34.97559702388096 38.0 34.0 40.0 25.0 41.0 36 34.66222148885956 38.0 33.0 40.0 24.0 41.0 37 34.68989059562382 38.0 33.0 40.0 24.0 41.0 38 34.76791871674867 37.0 33.0 40.0 24.0 41.0 39 34.625595023800955 37.0 33.0 40.0 24.0 41.0 40 34.60067702708108 37.0 33.0 40.0 24.0 41.0 41 34.54072762910516 37.0 33.0 40.0 24.0 41.0 42 34.497627905116204 37.0 33.0 40.0 24.0 41.0 43 34.43910056402256 37.0 33.0 40.0 24.0 41.0 44 34.55965638625545 37.0 33.0 40.0 24.0 41.0 45 34.5657536301452 37.0 33.0 40.0 24.0 41.0 46 34.51824472978919 37.0 33.0 40.0 24.0 41.0 47 34.34271670866835 37.0 33.0 40.0 24.0 41.0 48 34.31905776231049 37.0 33.0 40.0 24.0 41.0 49 34.36833273330933 37.0 33.0 40.0 24.0 41.0 50 34.1602504100164 37.0 33.0 40.0 24.0 41.0 51 33.17690707628305 36.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 10.0 11 20.0 12 20.0 13 27.0 14 31.0 15 63.0 16 124.0 17 289.0 18 609.0 19 1345.0 20 3046.0 21 5525.0 22 8338.0 23 10751.0 24 12630.0 25 13964.0 26 15203.0 27 16749.0 28 19695.0 29 24659.0 30 31262.0 31 40324.0 32 50823.0 33 65809.0 34 86984.0 35 90744.0 36 109615.0 37 137556.0 38 166636.0 39 87099.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.628985159406373 4.001260050402016 49.3113724548982 17.058382335293413 2 20.518120724828993 12.519800792031683 47.709808392335695 19.252270090803634 3 19.951798071922877 12.48709948397936 48.1976279051162 19.36347453898156 4 18.098623944957797 4.569182767310692 52.576303052122086 24.755890235609424 5 24.347373894955798 5.103204128165126 46.735469418776745 23.813952558102326 6 20.374314972598903 13.378835153406134 49.55768230729229 16.689167566702668 7 77.18188727549102 2.048781951278051 16.89157566302652 3.8777551102044083 8 78.4549381975279 9.413476539061563 7.8659146365854635 4.265670626825073 9 73.48223928957158 4.429977199087964 9.244669786791473 12.843113724548981 10 43.25963038521541 24.176267050682025 17.216188647545902 15.347913916556664 11 33.50344013760551 22.64770590823633 25.6551262050482 18.193727749109964 12 26.300252010080406 19.954698187927516 29.096063842553704 24.648985959438377 13 27.62900516020641 19.948597943917758 33.10672426897076 19.315672626905076 14 20.910236409456378 27.172086883475338 30.77393095723829 21.143745749829993 15 18.669246769870796 22.739009560382414 35.55942237689508 23.032321292851716 16 22.710508420336815 22.459098363934558 29.485779431177246 25.344613784551385 17 22.5180007200288 26.29395175807032 30.62622504900196 20.561822472898918 18 22.33239329573183 22.402496099843994 30.015600624024962 25.249509980399214 19 22.34989399575983 24.99769990799632 28.60594423776951 24.046461858474338 20 27.268890755630228 24.85259410376415 30.61532461298452 17.263190527621106 21 24.711788471538863 28.78405136205448 28.49163966558662 18.012520500820035 22 22.680107204288174 21.53746149845994 33.90505620224809 21.8773750950038 23 25.213708548341934 25.408016320652827 29.255270210808433 20.123004920196806 24 22.399295971838875 26.65316612664507 28.481139245569825 22.466398655946236 25 21.931077243089725 29.595383815352616 26.431757270290813 22.04178167126685 26 20.299311972478897 24.84689387575503 31.37565502620105 23.478139125565022 27 24.004560182407296 25.34851394055762 28.477639105564222 22.16928677147086 28 19.046161846473858 28.322332893315732 30.072002880115207 22.559502380095203 29 22.306492259690387 24.08626345053802 31.477659106364253 22.129585183407336 30 23.049221968878754 27.618104724188967 28.87545501820073 20.45721828873155 31 23.055322212888516 23.657646305852236 26.75147005880235 26.5355614224569 32 26.392155686227447 26.720868834753393 26.60626425057002 20.28071122844914 33 26.61036441457658 23.4339373574943 26.308852354094164 23.646845873834955 34 22.15778631145246 23.764850594023763 29.30947237889516 24.767890715628624 35 24.287371494859794 24.926997079883193 28.772450898035924 22.01318052722109 36 21.58296331853274 27.240289611584462 28.922056882275292 22.254690187607505 37 22.37579503180127 26.70296811872475 27.838713548541943 23.08252330093204 38 22.46629865194608 25.25861034441378 26.312852514100566 25.96223848953958 39 21.655366214648588 27.849213968558743 26.952978119124765 23.542441697667908 40 22.7878115124605 22.749809992399697 29.464578583143325 24.99779991199648 41 19.558382335293413 23.842453698147924 28.966658666346657 27.632505300212006 42 21.434757390295612 23.77095083803352 31.61796471858874 23.176327053082126 43 20.703028121124845 24.69408776351054 30.50182007280291 24.101064042561703 44 23.083723348933958 23.16082643305732 30.00190007600304 23.75355014200568 45 21.68716748669947 22.80321212848514 27.95641825673027 27.553202128085125 46 23.349533981359254 26.491059642385693 27.88121524860994 22.278191127645105 47 19.571782871314852 26.100544021760868 32.402596103844154 21.925077003080123 48 21.10184407376295 25.526521060842434 29.125265010600426 24.246369854794192 49 22.162386495459817 22.85501420056802 31.96287851514061 23.019720788831552 50 21.666466658666348 23.94825793031721 29.529581183247327 24.85569422776911 51 20.536721468858754 23.474838993559743 29.52428097123885 26.464158566342654 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 205.0 1 523.0 2 841.0 3 4066.0 4 7291.0 5 5114.5 6 2938.0 7 2803.5 8 2669.0 9 2785.0 10 2901.0 11 2901.5 12 2902.0 13 2896.5 14 2891.0 15 2805.5 16 2720.0 17 2847.0 18 2974.0 19 2969.0 20 2964.0 21 3184.0 22 3404.0 23 4109.5 24 4815.0 25 5757.5 26 8619.0 27 10538.0 28 11831.0 29 13124.0 30 15251.0 31 17378.0 32 19629.0 33 21880.0 34 24449.0 35 27018.0 36 29464.0 37 31910.0 38 33838.5 39 35767.0 40 38889.5 41 42012.0 42 45528.5 43 49045.0 44 51886.5 45 54728.0 46 82175.0 47 109622.0 48 99030.0 49 88438.0 50 86137.0 51 83836.0 52 78623.5 53 73411.0 54 68493.0 55 63575.0 56 59276.5 57 54978.0 58 51515.0 59 48052.0 60 43324.5 61 38597.0 62 34686.5 63 30776.0 64 26776.5 65 22777.0 66 18548.5 67 14320.0 68 11450.0 69 8580.0 70 7121.5 71 5663.0 72 4556.5 73 3450.0 74 2865.0 75 1603.5 76 927.0 77 751.5 78 576.0 79 456.0 80 336.0 81 214.0 82 92.0 83 71.0 84 50.0 85 28.0 86 6.0 87 4.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 999960.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.903638556943125 #Duplication Level Percentage of deduplicated Percentage of total 1 74.22029742712508 23.678975427038136 2 8.056010226857548 5.1403207697740125 3 2.9460667069116884 2.819707421458626 4 1.633134094602058 2.084116794768185 5 1.25080562585717 1.9952625296169095 6 1.0710402137395028 2.050204791545773 7 0.9266262711197774 2.0693924741821355 8 0.8611361708878036 2.19787017154516 9 0.8126484425714311 2.333379796709552 >10 8.08894710801843 44.942331999703946 >50 0.08684385910932028 1.8833204882512486 >100 0.03880924719483634 2.316366967085096 >500 0.003181085835604476 0.7592333193413874 >1k 0.0034991944191649234 2.4933624100493526 >5k 3.181085835604476E-4 0.8904575783854208 >10k+ 6.362171671208951E-4 2.345697060545046 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGC 11982 1.1982479299171966 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCG 11131 1.1131445257810313 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTC 8774 0.877435097403896 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4367 0.43671746869874795 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCAGCTTT 4164 0.4164166566662667 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTA 2653 0.265310612424497 No Hit GCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCTGC 2425 0.2425097003880155 TruSeq Adapter, Index 13 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCT 2218 0.22180887235489422 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTC 2180 0.21800872034881394 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCT 1928 0.19280771230849233 No Hit CCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCTGC 1201 0.12010480419216768 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTTCTGCT 1184 0.11840473618944757 TruSeq Adapter, Index 19 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCTGCAGCTTTCGTATGCCGTCTT 1152 0.11520460818432737 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1096 0.10960438417536701 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12620504820192807 0.0 2 0.0 0.0 0.0 0.6158246329853194 0.0 3 0.0 0.0 0.0 0.8199327973118925 0.0 4 0.0 0.0 0.0 1.3194527781111245 0.0 5 0.0 0.0 0.0 2.7405096203848154 0.0 6 0.0 0.0 0.0 3.28663146525861 0.0 7 0.0 0.0 0.0 3.844453778151126 0.0 8 0.0 0.0 0.0 4.551282051282051 0.0 9 0.0 0.0 0.0 4.813592543701748 0.0 10 0.0 0.0 0.0 6.493659746389856 0.0 11 0.0 0.0 0.0 7.295291811672467 0.0 12 0.0 0.0 0.0 9.37457498299932 0.0 13 0.0 0.0 0.0 9.68178727149086 0.0 14 0.0 0.0 0.0 9.85319412776511 0.0 15 0.0 0.0 0.0 10.294311772470898 0.0 16 0.0 0.0 0.0 10.650726029041161 0.0 17 0.0 0.0 0.0 11.058642345693828 0.0 18 0.0 0.0 0.0 11.461558462338493 0.0 19 0.0 0.0 0.0 12.33359334373375 0.0 20 0.0 0.0 0.0 12.723808952358095 0.0 21 0.0 0.0 0.0 13.193627745109804 0.0 22 0.0 0.0 0.0 13.723448937957519 0.0 23 0.0 0.0 0.0 14.22366894675787 0.0 24 0.0 0.0 0.0 14.639685587423497 0.0 25 0.0 0.0 0.0 15.00320012800512 0.0 26 0.0 0.0 0.0 15.352614104564182 0.0 27 0.0 0.0 0.0 15.707028281131246 0.0 28 0.0 0.0 0.0 16.07334293371735 0.0 29 0.0 0.0 0.0 16.465458618344734 0.0 30 0.0 0.0 0.0 16.930677227089085 0.0 31 0.0 0.0 0.0 17.34629385175407 0.0 32 0.0 0.0 0.0 17.756010240409616 0.0 33 0.0 0.0 0.0 18.160426417056684 0.0 34 0.0 0.0 0.0 18.58994359774391 0.0 35 0.0 0.0 0.0 19.04146165846634 0.0 36 0.0 0.0 0.0 19.463578543141725 0.0 37 0.0 0.0 0.0 19.904996199847993 0.0 38 0.0 0.0 0.0 20.405716228649148 0.0 39 0.0 0.0 0.0 21.088643545741828 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTACG 20 7.0328446E-4 45.000004 1 ACACTCG 20 7.0328446E-4 45.000004 29 CGATCGA 275 0.0 45.0 41 CCGATCG 280 0.0 44.196426 40 GATCGAA 295 0.0 41.949154 42 CGTTTTT 2585 0.0 41.86654 1 CACCCGT 70 0.0 41.785713 38 GATGAAT 3290 0.0 41.717327 20 CCGATGA 3050 0.0 41.45902 18 CTACGGT 60 3.6379788E-12 41.250004 45 CGATGAA 3100 0.0 41.225807 19 ATGAATG 3325 0.0 41.00752 21 TACGGCT 1475 0.0 40.881355 7 CGAATAG 95 0.0 40.26316 26 TGATACC 1265 0.0 39.8419 4 TTGGGAC 1755 0.0 39.743587 5 TTTGGGC 2025 0.0 39.555557 4 TGAATGA 3440 0.0 39.309593 22 ACGGCTG 1535 0.0 39.283386 8 TGGGCGA 1285 0.0 38.6965 6 >>END_MODULE