##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934073.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 515546 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.949655316887338 31.0 30.0 31.0 26.0 34.0 2 30.048030631602224 31.0 30.0 33.0 25.0 34.0 3 30.080636839389694 31.0 30.0 34.0 25.0 34.0 4 33.907121769929354 35.0 33.0 37.0 28.0 37.0 5 34.391790451288536 35.0 35.0 37.0 32.0 37.0 6 33.81465475437691 35.0 35.0 37.0 29.0 37.0 7 34.36529427054036 35.0 35.0 37.0 32.0 37.0 8 34.33452882962917 35.0 35.0 37.0 31.0 37.0 9 35.85708549770535 37.0 35.0 39.0 31.0 39.0 10 35.307887172046726 37.0 34.0 39.0 30.0 39.0 11 35.416833803385146 37.0 35.0 39.0 30.0 39.0 12 35.386623114135304 37.0 35.0 39.0 30.0 39.0 13 35.30042518029429 37.0 34.0 39.0 30.0 39.0 14 35.861443983660045 38.0 34.0 40.0 27.0 41.0 15 36.101465242674756 38.0 34.0 40.0 29.0 41.0 16 36.35523503237344 38.0 35.0 40.0 30.0 41.0 17 36.12474735523115 38.0 34.0 40.0 30.0 41.0 18 36.3052045792228 38.0 35.0 40.0 30.0 41.0 19 36.25568426483767 38.0 35.0 40.0 30.0 41.0 20 36.19923149437683 38.0 34.0 40.0 30.0 41.0 21 35.951519360057105 38.0 34.0 40.0 29.0 41.0 22 36.17817420753919 38.0 34.0 40.0 30.0 41.0 23 36.21876418399134 38.0 34.0 40.0 30.0 41.0 24 36.146791944850705 38.0 34.0 40.0 30.0 41.0 25 35.72778956678938 38.0 34.0 40.0 29.0 41.0 26 35.85443200024828 38.0 34.0 40.0 30.0 41.0 27 35.829280025448746 38.0 34.0 40.0 29.0 41.0 28 35.74568127771334 38.0 34.0 40.0 29.0 41.0 29 35.85799909222455 38.0 34.0 40.0 29.0 41.0 30 35.44901133943431 38.0 34.0 40.0 28.0 41.0 31 35.56185093085777 38.0 34.0 40.0 29.0 41.0 32 35.51453410558903 38.0 34.0 40.0 28.0 41.0 33 35.555048434087354 38.0 34.0 40.0 29.0 41.0 34 35.48499260977682 38.0 34.0 40.0 28.0 41.0 35 35.48571805425704 38.0 34.0 40.0 28.0 41.0 36 35.27078282054366 38.0 34.0 40.0 27.0 41.0 37 35.353353531983565 38.0 34.0 40.0 28.0 41.0 38 35.20807066682701 38.0 34.0 40.0 27.0 41.0 39 35.160938112215014 37.0 34.0 40.0 27.0 41.0 40 35.07578955127185 37.0 33.0 40.0 27.0 41.0 41 34.881413103777355 37.0 33.0 40.0 26.0 41.0 42 35.12636117824598 37.0 33.0 40.0 27.0 41.0 43 35.10517393210305 37.0 34.0 40.0 27.0 41.0 44 35.11946751599275 37.0 34.0 40.0 27.0 41.0 45 35.15946006757884 37.0 34.0 40.0 28.0 41.0 46 35.07694948656376 37.0 34.0 40.0 27.0 41.0 47 34.967446163872864 37.0 33.0 40.0 27.0 41.0 48 34.94614253626253 37.0 33.0 40.0 27.0 41.0 49 34.975707308368214 37.0 34.0 40.0 27.0 41.0 50 34.76927955992288 36.0 33.0 40.0 27.0 41.0 51 33.70279858635311 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 8.0 11 7.0 12 12.0 13 15.0 14 19.0 15 36.0 16 81.0 17 139.0 18 253.0 19 459.0 20 939.0 21 1578.0 22 2415.0 23 3241.0 24 4297.0 25 5318.0 26 6474.0 27 7824.0 28 9986.0 29 12728.0 30 16686.0 31 21042.0 32 27391.0 33 35573.0 34 47718.0 35 48619.0 36 59028.0 37 74671.0 38 86549.0 39 42436.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.466891412211517 4.724505669717154 52.453321333110914 16.35528158496041 2 20.360743755164428 8.176379993249874 50.735336904951254 20.72753934663444 3 21.228367594744213 8.116249568418725 49.723594014889066 20.931788821947993 4 19.759827445077647 4.929143083255423 49.3556346087449 25.955394862922027 5 21.37811174948501 5.509498667432198 47.70204792588828 25.410341657194508 6 21.834909009089394 9.47830067540045 50.50238000100864 18.18441031450152 7 81.75390750776846 2.226765409876131 11.883129730421729 4.136197351933678 8 82.93071811244778 5.769417277992652 6.296625325383186 5.003239284176388 9 78.16819449670834 4.817416874536899 8.291597645990853 8.722790982763904 10 41.94116528883941 27.72225950739604 15.75145573818825 14.585119465576302 11 32.87931629767276 24.1053174692462 24.074670349493545 18.940695883587498 12 27.182831405926922 21.286558328451775 28.678527231323685 22.852083034297618 13 26.266715288257497 23.479185174552804 30.588735049830667 19.66536448735903 14 21.0192688916217 26.971017135231385 30.282651790528874 21.72706218261804 15 18.287795851388626 24.075252256830623 34.450854046001716 23.186097845779038 16 22.867794532398662 23.580631020316325 29.266253641770085 24.285320805514928 17 22.847427775601016 25.478618784744718 28.258002195730352 23.415951243923917 18 24.312864419469843 22.29597358916566 30.16646429222611 23.22469769913839 19 23.86576561548339 24.927358567421724 26.939400169916944 24.267475647177942 20 25.851815356922565 26.71614172159225 28.821482467131933 18.610560454353248 21 24.612934636288518 28.286515655247058 28.022135755102358 19.078413953362066 22 23.09648411586939 22.853828756308843 31.00208322826673 23.047603899555035 23 23.035577814588805 25.82679334142831 28.988295903760285 22.1493329402226 24 22.652100879455954 26.347212469886294 27.912543206619777 23.08814344403797 25 22.044201681324267 28.931462953839233 25.66036784302468 23.363967521811826 26 20.964569601936585 25.612457472272116 27.84290829528306 25.580064630508236 27 22.048856940020872 25.448553572329143 28.904501247221393 23.598088240428595 28 17.936517788907295 27.034832973197346 30.42366733521354 24.604981902681818 29 20.80376920779135 25.620604174991175 29.58979412118414 23.985832496033332 30 22.91706268693773 25.79226683942849 29.29088771903962 21.999782754594158 31 25.087771023342242 25.252838737959365 26.929507745186655 22.72988249351173 32 26.25333141950476 26.943279552164114 24.879642165781522 21.923746862549606 33 24.9279404747588 25.496076004856988 24.90117273725332 24.674810783130894 34 22.36308690204172 24.56192075973822 29.697834916767853 23.377157421452207 35 22.803784725320337 25.948024036652406 26.91980928956873 24.328381948458528 36 23.443494857878832 27.78568740713729 26.29309508753826 22.47772264744562 37 20.819286736780036 27.902262843664776 27.114166340151996 24.164284079403195 38 21.930341812369797 28.41725083697672 26.482214972087846 23.170192378565638 39 23.123639791599583 28.059183855562843 25.836879735270955 22.980296617566616 40 26.799160501681712 23.421964286407032 26.702757852839515 23.07611735907174 41 22.38403556617644 24.357865253537025 26.498314408413602 26.759784771872923 42 22.692252485714175 24.360774790222408 28.365655053089345 24.581317670974073 43 21.07086467550907 26.058198492472055 28.167612589371267 24.7033242426476 44 22.346793496603603 24.017643430460133 28.79413282228938 24.841430250646887 45 22.700399188433234 23.487331877271863 26.263999720684478 27.54826921361043 46 23.162239644958937 25.308119934981555 27.440810325363792 24.08883009469572 47 19.147466957361708 26.38270881744791 31.445302650006013 23.024521575184366 48 20.9841604822848 27.12929593091596 28.42753119993172 23.459012386867514 49 23.656472943248517 24.029087608089288 29.491839719443075 22.82259972921912 50 22.235649195222155 25.29958529403778 27.325980610847527 25.138784899892542 51 21.28112719330574 24.065941739437413 26.813708185108602 27.839222882148245 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 120.0 1 267.5 2 415.0 3 736.5 4 1058.0 5 785.0 6 512.0 7 584.0 8 656.0 9 739.5 10 823.0 11 878.5 12 934.0 13 980.0 14 1026.0 15 1051.0 16 1076.0 17 1060.5 18 1045.0 19 1074.0 20 1103.0 21 1269.5 22 1436.0 23 1556.0 24 1676.0 25 2298.0 26 3515.0 27 4110.0 28 4768.0 29 5426.0 30 6331.0 31 7236.0 32 9391.5 33 11547.0 34 12781.5 35 14016.0 36 14970.5 37 15925.0 38 17010.5 39 18096.0 40 20737.5 41 23379.0 42 25314.0 43 27249.0 44 30399.5 45 33550.0 46 42733.0 47 51916.0 48 51649.0 49 51382.0 50 49988.0 51 48594.0 52 43593.5 53 38593.0 54 36363.0 55 34133.0 56 31672.0 57 29211.0 58 26787.0 59 24363.0 60 20572.5 61 16782.0 62 14604.5 63 12427.0 64 11859.5 65 11292.0 66 9665.0 67 8038.0 68 6549.0 69 5060.0 70 4357.0 71 3654.0 72 2870.0 73 2086.0 74 1743.0 75 1025.5 76 651.0 77 506.0 78 361.0 79 260.5 80 160.0 81 112.0 82 64.0 83 49.5 84 35.0 85 21.0 86 7.0 87 4.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 515546.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.93548605060111 #Duplication Level Percentage of deduplicated Percentage of total 1 74.08836034669034 25.14224519057018 2 9.578226521103355 6.500835449928009 3 3.375089717725403 3.4360593010619285 4 1.790054616973304 2.429854939364466 5 1.1854278667461033 2.0114035417978107 6 0.9039919801055014 1.8406444338435308 7 0.7570050184630193 1.7982533271000771 8 0.6536218138900527 1.7744779158107578 9 0.6530009827233236 1.9943915166212542 >10 6.846966756159471 43.12600086312556 >50 0.10870042381779497 2.5191768741393314 >100 0.04741188698435736 2.6549561713512957 >500 0.008094712411963452 1.8273303395014866 >1k 0.004047356205981726 2.9443701357843133 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGC 3565 0.6914998855582237 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCG 2989 0.5797736768397 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTC 2525 0.4897720087053338 No Hit CCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 2019 0.3916236378519085 No Hit CTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGCT 1351 0.2620522707963984 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 1304 0.25293572251554663 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCTAGGGAT 1253 0.24304329778526068 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 901 0.17476617023505178 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 882 0.17108075710023934 No Hit TCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 869 0.16855915863957824 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTC 827 0.1604124559205192 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCTAGGGATCGTA 764 0.1481924018419307 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCT 657 0.12743770681956604 No Hit GAACTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCT 614 0.11909703498814848 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 569 0.11036842493201383 No Hit GCGCTCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 565 0.10959254848257963 No Hit GCGCGCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC 565 0.10959254848257963 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATCGAATGC 547 0.10610110446012577 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 536 0.10396744422418173 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.28009139824574336 0.0 2 0.0 0.0 0.0 1.1898065352073335 0.0 3 0.0 0.0 0.0 1.5160625821944114 0.0 4 0.0 0.0 0.0 2.157712405876488 0.0 5 0.0 0.0 0.0 3.4458612810496057 0.0 6 0.0 0.0 0.0 3.9492111276200377 0.0 7 0.0 0.0 0.0 4.554588727291066 0.0 8 0.0 0.0 0.0 5.484088713713228 0.0 9 0.0 0.0 0.0 5.793081509700396 0.0 10 0.0 0.0 0.0 7.047479759323125 0.0 11 0.0 0.0 0.0 8.391103800630788 0.0 12 0.0 0.0 0.0 10.393059009283363 0.0 13 0.0 0.0 0.0 10.838800029483306 0.0 14 0.0 0.0 0.0 11.009298879246469 0.0 15 0.0 0.0 0.0 11.383465296986108 0.0 16 0.0 0.0 0.0 11.88409957598352 0.0 17 0.0 0.0 0.0 12.588983330294484 0.0 18 0.0 0.0 0.0 13.366411532627545 0.0 19 0.0 0.0 0.0 14.175650669387407 0.0 20 0.0 0.0 0.0 14.804692500766178 0.0 21 0.0 0.0 0.0 15.59918998498679 0.0 22 0.0 0.0 0.0 16.454981708712705 0.0 23 0.0 0.0 0.0 17.226978775899727 0.0 24 0.0 0.0 0.0 17.853499008817835 0.0 25 0.0 0.0 0.0 18.42241041536546 0.0 26 0.0 0.0 0.0 18.933325057317873 0.0 27 0.0 0.0 0.0 19.482451614404923 0.0 28 0.0 0.0 0.0 20.010241569132532 0.0 29 0.0 0.0 0.0 20.621632211286673 0.0 30 0.0 0.0 0.0 21.405267425215207 0.0 31 0.0 0.0 0.0 21.977476306672926 0.0 32 0.0 0.0 0.0 22.517098377254406 0.0 33 0.0 0.0 0.0 23.08445803090316 0.0 34 0.0 0.0 0.0 23.692745167259567 0.0 35 0.0 0.0 0.0 24.37881391767175 0.0 36 0.0 0.0 0.0 24.94908310800588 0.0 37 0.0 0.0 0.0 25.543210499160114 0.0 38 0.0 0.0 0.0 26.20367532674097 0.0 39 0.0 0.0 0.0 27.24431961454458 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 90 0.0 45.000004 40 CGATCGA 90 0.0 45.000004 41 TCCGGCA 20 7.0296624E-4 45.0 15 TCGTTGA 35 1.2101918E-7 45.0 24 AACCCGC 20 7.0296624E-4 45.0 39 GGGCGTA 20 7.0296624E-4 45.0 7 ACTACCG 20 7.0296624E-4 45.0 16 TACGTTG 20 7.0296624E-4 45.0 24 TACGGGA 50 1.0786607E-9 40.5 4 TACGGCT 435 0.0 40.34483 7 GCGATTC 145 0.0 40.34483 9 CGATGAA 635 0.0 40.03937 19 CCGGGTA 45 1.9246727E-8 40.000004 5 TACGAAT 90 0.0 40.000004 12 TTGACAC 90 0.0 40.000004 28 CGGGATA 90 0.0 40.000004 6 CCGATGA 630 0.0 39.999996 18 GCGATCT 170 0.0 39.705883 9 CCTATGC 85 0.0 39.705883 35 TGGGCGA 800 0.0 39.65625 6 >>END_MODULE