SRR2934070.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934070.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	158638
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC	798	0.5030320604142765	No Hit
CTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGCT	663	0.4179326516975756	No Hit
TCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC	596	0.3756981303344722	No Hit
GCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC	558	0.35174422269569716	No Hit
CGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTG	182	0.11472661026992273	No Hit
TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	171	0.10779258437448783	No Hit
TTCCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCT	168	0.10590148640300559	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCC	166	0.10464075442201742	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	165	0.10401038843152334	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTTGCG	110	0.0	45.000004	1
TCACGGG	25	3.875563E-5	45.0	3
TGTTTAG	20	7.014889E-4	45.0	1
CGGGTGT	35	1.2030978E-7	45.0	6
CGGCGCA	35	1.2030978E-7	45.0	22
ACCGGCT	35	1.2030978E-7	45.0	20
GTACAGA	35	1.2030978E-7	45.0	9
ACACCGG	35	1.2030978E-7	45.0	18
TTTCGCG	20	7.014889E-4	45.0	1
ATAGCCC	20	7.014889E-4	45.0	24
GTGATAG	20	7.014889E-4	45.0	32
TTCCGGA	20	7.014889E-4	45.0	3
TACGGGG	25	3.875563E-5	45.0	4
TAACGAG	20	7.014889E-4	45.0	21
AGAACGA	25	3.875563E-5	45.0	13
GACCACT	20	7.014889E-4	45.0	25
GCCGATG	20	7.014889E-4	45.0	9
GTCGTGA	20	7.014889E-4	45.0	10
GTGTACA	25	3.875563E-5	45.0	7
TAGGGTA	20	7.014889E-4	45.0	5