SRR2934068.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934068.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	460881
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT	1327	0.28792681841950524	No Hit
TCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	1152	0.24995606241090432	No Hit
CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	957	0.2076457914298919	No Hit
GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC	952	0.20656091268678897	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	775	0.16815620518094693	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCC	566	0.12280827371924641	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGATT	60	0.0	45.000004	9
TGATCGG	25	3.887157E-5	45.0	2
TACCCGG	25	3.887157E-5	45.0	29
TCGCACA	20	7.0288836E-4	45.0	37
ACCGGCG	20	7.0288836E-4	45.0	20
GACAATC	20	7.0288836E-4	45.0	9
TAGCGGG	80	0.0	45.0	3
CGCCTAG	20	7.0288836E-4	45.0	45
TATCTAG	20	7.0288836E-4	45.0	34
GTTCGCG	40	6.7993824E-9	45.0	1
AATCTCG	20	7.0288836E-4	45.0	30
CGACTTC	20	7.0288836E-4	45.0	41
CACGTAT	20	7.0288836E-4	45.0	19
CGTCATA	20	7.0288836E-4	45.0	38
ATACCCG	25	3.887157E-5	45.0	28
GGCCGAT	130	0.0	41.53846	8
GGGCCGA	130	0.0	41.53846	7
CCACGGG	60	3.6379788E-12	41.250004	3
TTTCGCG	175	0.0	41.14286	1
GGACCGC	50	1.0786607E-9	40.5	8