##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934067.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 399499 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.88404726920468 31.0 30.0 31.0 25.0 34.0 2 30.07085124117958 31.0 30.0 33.0 26.0 34.0 3 30.147517265374884 31.0 30.0 33.0 25.0 34.0 4 33.93433775804195 35.0 33.0 37.0 28.0 37.0 5 34.383905842067186 35.0 35.0 37.0 32.0 37.0 6 33.83645516008801 35.0 35.0 37.0 30.0 37.0 7 34.47072708567481 35.0 35.0 37.0 32.0 37.0 8 34.587230506209025 35.0 35.0 37.0 32.0 37.0 9 35.91812745463693 37.0 35.0 39.0 31.0 39.0 10 35.046282969419195 37.0 34.0 39.0 29.0 39.0 11 35.21414321437601 37.0 34.0 39.0 30.0 39.0 12 35.23009819799299 37.0 34.0 39.0 30.0 39.0 13 35.25243367317565 37.0 34.0 39.0 30.0 39.0 14 35.944355305019535 38.0 34.0 40.0 29.0 41.0 15 36.17093409495393 38.0 34.0 40.0 30.0 41.0 16 36.36068676016711 38.0 35.0 40.0 31.0 41.0 17 36.06112656101767 38.0 34.0 40.0 30.0 41.0 18 36.21416323945742 38.0 35.0 40.0 30.0 41.0 19 36.215522441858425 38.0 34.0 40.0 30.0 41.0 20 36.214513678382175 38.0 34.0 40.0 30.0 41.0 21 35.92800983231498 38.0 34.0 40.0 29.0 41.0 22 36.10620802555201 38.0 34.0 40.0 30.0 41.0 23 36.14162738830385 38.0 34.0 40.0 30.0 41.0 24 36.06210779000698 38.0 34.0 40.0 30.0 41.0 25 35.57847704249573 38.0 34.0 40.0 28.0 41.0 26 35.65944595605996 38.0 34.0 40.0 29.0 41.0 27 35.702857829431366 38.0 34.0 40.0 29.0 41.0 28 35.66718815316184 38.0 34.0 40.0 29.0 41.0 29 35.81103331923234 38.0 34.0 40.0 29.0 41.0 30 35.29870913318932 38.0 34.0 40.0 27.0 41.0 31 35.47254185867799 38.0 34.0 40.0 29.0 41.0 32 35.526138989083826 38.0 34.0 40.0 29.0 41.0 33 35.577911333945764 38.0 34.0 40.0 29.0 41.0 34 35.54964843466442 38.0 34.0 40.0 28.0 41.0 35 35.55381865786898 38.0 34.0 40.0 28.0 41.0 36 35.36807601520905 38.0 34.0 40.0 27.0 41.0 37 35.42648166828953 38.0 34.0 40.0 28.0 41.0 38 35.378454013652096 38.0 34.0 40.0 28.0 41.0 39 35.264676507325426 38.0 34.0 40.0 27.0 41.0 40 35.24458384126118 37.0 34.0 40.0 27.0 41.0 41 35.115049098996494 37.0 33.0 40.0 27.0 41.0 42 35.32633623613576 38.0 34.0 40.0 28.0 41.0 43 35.308599020272894 38.0 34.0 40.0 28.0 41.0 44 35.286979441750795 38.0 34.0 40.0 27.0 41.0 45 35.36180315845596 38.0 34.0 40.0 28.0 41.0 46 35.23957256463721 37.0 34.0 40.0 28.0 41.0 47 35.15606046573333 37.0 34.0 40.0 27.0 41.0 48 35.158984127619846 37.0 34.0 40.0 27.0 41.0 49 35.203610021551995 37.0 34.0 40.0 28.0 41.0 50 34.98761198400997 37.0 34.0 40.0 27.0 41.0 51 33.909481625736234 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 4.0 12 2.0 13 3.0 14 13.0 15 24.0 16 40.0 17 74.0 18 159.0 19 302.0 20 596.0 21 997.0 22 1577.0 23 2214.0 24 2889.0 25 3761.0 26 4859.0 27 6264.0 28 7871.0 29 10104.0 30 13052.0 31 16665.0 32 21235.0 33 27410.0 34 36855.0 35 38994.0 36 46757.0 37 58911.0 38 68581.0 39 29282.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.33147767578893 4.843316253607643 56.0224180786435 13.802787991959931 2 18.548481973672022 6.387250030663407 54.18061121554747 20.883656780117096 3 20.301177224473655 6.074608447079967 52.61815423818332 21.006060090263055 4 18.74547871208689 4.64682014222814 49.92753423663138 26.680166909053586 5 18.823075902567965 5.344944543040158 51.37159292013247 24.46038663425941 6 19.76625723718958 8.194013001284109 54.601388238769054 17.438341522757252 7 83.46078463275252 1.8743476203945442 10.51216648852688 4.152701258326053 8 85.51886237512485 4.00626785048273 5.670852743060683 4.8040170313317425 9 80.03949947309005 4.581988941148789 8.227054385617986 7.15145720014318 10 40.45316759240949 25.076157887754412 18.767506301642808 15.703168218193287 11 30.63862487765927 27.801321154746322 22.38528757268479 19.17476639490962 12 24.51044933779559 23.500183980435494 29.49919774517583 22.490168936593083 13 23.983539383077304 25.843368819446354 31.948765829201076 18.224325968275267 14 21.17627328228606 27.85438762049467 29.883428994816008 21.08591010240326 15 18.878895817010807 25.716960493017503 34.961289014490646 20.44285467548104 16 21.746487475563143 24.213327192308366 30.454143815128447 23.58604151700004 17 21.17852610394519 26.650379600449565 29.259147081719856 22.91194721388539 18 22.36075684795206 23.826092180456023 30.585308098393238 23.227842873198682 19 23.07139692464812 28.13123437104974 27.674662514799785 21.122706189502352 20 25.627097940170064 26.36502219029334 29.438371560379373 18.56950830915722 21 24.726720217071883 28.416591781205963 27.342246163319555 19.5144418384026 22 21.950993619508434 25.444118758745326 28.58680497322897 24.018082648517268 23 21.694422263885514 28.644126768777895 27.27290931892195 22.388541648414638 24 22.647115512179003 25.93172949118771 28.547005123917707 22.874149872715577 25 20.875646747551308 29.254391124883917 26.120465883519106 23.749496244045666 26 20.731966788402474 28.113462111294396 28.36027123972776 22.79429986057537 27 21.13922688166929 27.912460356596636 27.48567580895071 23.46263695278336 28 18.9051787363673 26.837864425192553 30.234118233086942 24.022838605353204 29 21.48541047662197 25.01357950833419 29.793065814933207 23.70794420011064 30 22.045361815674134 27.408579245504995 27.56677738867932 22.979281550141554 31 21.995799739173314 26.343495227772785 27.576038988833513 24.084666044220384 32 23.09342451420404 27.87441270190914 27.560018923701936 21.472143860184882 33 22.933474176405948 25.782042007614535 27.891684334629126 23.39279948135039 34 21.306185997962448 25.23986292831772 29.023852375099814 24.43009869862002 35 20.468636967802173 25.107947704499882 30.065156608652337 24.358258719045605 36 22.95875584169172 26.070403179982925 27.922973524339234 23.047867453986118 37 18.91644284466294 27.61759103276854 30.17229079421976 23.293675328348755 38 19.82257777866778 27.396814510173996 28.53098505878613 24.249622652372096 39 21.249364829448886 26.164521062630946 30.570789914367747 22.015324193552424 40 22.451870968387905 24.321712945464196 29.907709406031053 23.318706680116847 41 19.381275046996365 24.783040758550083 30.097447052433175 25.73823714202038 42 20.447610632316977 24.530975046245423 29.602326914460363 25.419087406977237 43 20.9242075699814 24.218083149144302 29.414091149164328 25.443618131709968 44 19.778522599555945 24.571776149627407 29.01183732625113 26.63786392456552 45 21.566762369868258 24.034603340684207 27.702697628780047 26.695936660667485 46 22.642609868860745 25.029599573465767 28.7069554617158 23.620835095957688 47 19.460123805065844 24.467645726272156 31.36603596003995 24.706194508622048 48 19.187282070793668 24.27290180951642 31.244383590447033 25.295432529242877 49 20.970765884270048 22.060630940252665 33.145514757233435 23.823088418243852 50 21.419578021471892 22.74348621648615 29.82685813982012 26.010077622221832 51 19.638347029654643 22.76651506011279 29.007581996450554 28.587555913782015 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 35.0 1 118.5 2 202.0 3 367.0 4 532.0 5 416.5 6 301.0 7 335.5 8 370.0 9 453.0 10 536.0 11 649.5 12 763.0 13 805.5 14 848.0 15 874.0 16 900.0 17 901.0 18 902.0 19 929.0 20 956.0 21 1072.5 22 1189.0 23 1380.5 24 1572.0 25 2115.5 26 2965.5 27 3272.0 28 4011.0 29 4750.0 30 5717.0 31 6684.0 32 7098.0 33 7512.0 34 9010.0 35 10508.0 36 11697.0 37 12886.0 38 14510.5 39 16135.0 40 18063.0 41 19991.0 42 22558.5 43 25126.0 44 28073.0 45 31020.0 46 38036.5 47 45053.0 48 45817.5 49 46582.0 50 44618.5 51 42655.0 52 36742.0 53 30829.0 54 27201.5 55 23574.0 56 20788.0 57 18002.0 58 15999.5 59 13997.0 60 12195.0 61 10393.0 62 9117.5 63 7842.0 64 6259.5 65 4677.0 66 3654.0 67 2631.0 68 2060.0 69 1489.0 70 1170.5 71 852.0 72 668.5 73 485.0 74 460.0 75 332.0 76 229.0 77 158.5 78 88.0 79 59.0 80 30.0 81 16.5 82 3.0 83 2.0 84 1.0 85 1.0 86 1.0 87 1.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 399499.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.83772106699769 #Duplication Level Percentage of deduplicated Percentage of total 1 74.65804645578919 28.995483836568965 2 10.647580664984606 8.270555358100598 3 3.7565933430821623 4.376925732622961 4 1.891502383656999 2.938465678961271 5 1.1869257918154619 2.3048746414877135 6 0.8503831432991262 1.9816165991716914 7 0.6732756419380974 1.8303944107956944 8 0.5768883970776487 1.7924024521991304 9 0.5093074369587254 1.7802306156555439 >10 5.08851085570024 36.61381907405165 >50 0.10688941398553195 2.786461245682764 >100 0.04823058923737418 3.3104415126307405 >500 0.0013035294388479507 0.3397012165430841 >1k 0.004562353035967828 2.6786276255282533 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGC 2050 0.5131427112458354 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCG 1769 0.4428046127775038 No Hit CTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGCT 1586 0.3969972390419 TruSeq Adapter, Index 22 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 1459 0.3652074222964263 TruSeq Adapter, Index 20 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 1424 0.35644644917759494 TruSeq Adapter, Index 20 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 1195 0.2991246536286699 TruSeq Adapter, Index 20 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC 1099 0.275094555931304 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCTGTTTT 836 0.20926210078122848 No Hit TTCTGTCGGGCCTCACCCTTGCAACCTCCCCACAAAAATAAAACACAAATA 506 0.12665863994653304 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4330423855879489 0.0 2 0.0 0.0 0.0 1.5872380156145571 0.0 3 0.0 0.0 0.0 1.9747233409845832 0.0 4 0.0 0.0 0.0 2.7038866179890313 0.0 5 0.0 0.0 0.0 4.011774747871709 0.0 6 0.0 0.0 0.0 4.620036595836285 0.0 7 0.0 0.0 0.0 5.260088260546334 0.0 8 0.0 0.0 0.0 6.328176040490715 0.0 9 0.0 0.0 0.0 6.710655095507122 0.0 10 0.0 0.0 0.0 8.039319247357316 0.0 11 0.0 0.0 0.0 9.644579836244898 0.0 12 0.0 0.0 0.0 11.64984142638655 0.0 13 0.0 0.0 0.0 12.153722537478192 0.0 14 0.0 0.0 0.0 12.306664096781219 0.0 15 0.0 0.0 0.0 12.635826372531596 0.0 16 0.0 0.0 0.0 13.312173497305375 0.0 17 0.0 0.0 0.0 14.40404106142944 0.0 18 0.0 0.0 0.0 15.500414268871761 0.0 19 0.0 0.0 0.0 16.49215642592347 0.0 20 0.0 0.0 0.0 17.255362341332518 0.0 21 0.0 0.0 0.0 18.333212348466454 0.0 22 0.0 0.0 0.0 19.482401708139445 0.0 23 0.0 0.0 0.0 20.682154398383975 0.0 24 0.0 0.0 0.0 21.508939947283974 0.0 25 0.0 0.0 0.0 22.353998382974677 0.0 26 0.0 0.0 0.0 23.058130308211034 0.0 27 0.0 0.0 0.0 23.76451505510652 0.0 28 0.0 0.0 0.0 24.520461878502825 0.0 29 0.0 0.0 0.0 25.272653999133915 0.0 30 0.0 0.0 0.0 26.127474662014173 0.0 31 0.0 0.0 0.0 26.94099359447708 0.0 32 0.0 0.0 0.0 27.71396173707569 0.0 33 0.0 0.0 0.0 28.523225339738023 0.0 34 0.0 0.0 0.0 29.28543000107635 0.0 35 2.5031351768089533E-4 0.0 0.0 30.151264458734566 0.0 36 2.5031351768089533E-4 0.0 0.0 30.928738244651427 0.0 37 2.5031351768089533E-4 0.0 0.0 31.745010625808824 0.0 38 2.5031351768089533E-4 0.0 0.0 32.56278488807231 0.0 39 2.5031351768089533E-4 0.0 0.0 33.39833141009114 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGT 20 7.027754E-4 45.0 8 CCGATCG 20 7.027754E-4 45.0 40 GTTTACG 20 7.027754E-4 45.0 1 CACGCTA 25 3.88622E-5 45.0 35 GAATCGG 20 7.027754E-4 45.0 22 ACTTCGA 20 7.027754E-4 45.0 29 TTCGTAG 25 3.88622E-5 45.0 1 GCCGATC 35 1.2092642E-7 45.0 9 CTACGAA 25 3.88622E-5 45.0 11 TACGAAT 25 3.88622E-5 45.0 12 GTCGTCG 25 3.88622E-5 45.0 1 GCGATAG 20 7.027754E-4 45.0 9 TATAGCG 35 1.2092642E-7 45.0 38 ATGCGCT 20 7.027754E-4 45.0 12 GACGCTA 20 7.027754E-4 45.0 21 GCTACGA 25 3.88622E-5 45.0 10 TTGCACG 20 7.027754E-4 45.0 1 CATCCCG 20 7.027754E-4 45.0 36 AAAGCGA 20 7.027754E-4 45.0 28 CGCCCAC 25 3.88622E-5 45.0 34 >>END_MODULE