##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934066.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 423013 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.041965613349944 31.0 30.0 31.0 26.0 34.0 2 30.155598054906115 31.0 30.0 33.0 26.0 34.0 3 30.220631517234693 31.0 30.0 34.0 25.0 34.0 4 34.01038265963457 35.0 33.0 37.0 28.0 37.0 5 34.46213709744145 35.0 35.0 37.0 32.0 37.0 6 33.902293782933384 35.0 35.0 37.0 30.0 37.0 7 34.43448782897925 35.0 35.0 37.0 32.0 37.0 8 34.426930141626855 35.0 35.0 37.0 31.0 37.0 9 35.933846004732715 37.0 35.0 39.0 31.0 39.0 10 35.339743695820225 37.0 34.0 39.0 30.0 39.0 11 35.48071808667819 37.0 35.0 39.0 30.0 39.0 12 35.44618959701002 37.0 35.0 39.0 30.0 39.0 13 35.37154177294788 37.0 35.0 39.0 30.0 39.0 14 35.97966729154896 38.0 34.0 40.0 27.0 41.0 15 36.260932879131374 38.0 35.0 40.0 30.0 41.0 16 36.47638725051003 38.0 35.0 40.0 31.0 41.0 17 36.23113710453343 38.0 35.0 40.0 30.0 41.0 18 36.37718698952514 38.0 35.0 40.0 30.0 41.0 19 36.35041003467978 38.0 35.0 40.0 30.0 41.0 20 36.291504043610956 38.0 34.0 40.0 30.0 41.0 21 36.071730656031846 38.0 34.0 40.0 30.0 41.0 22 36.28532692848683 38.0 34.0 40.0 30.0 41.0 23 36.3153401904906 38.0 34.0 40.0 30.0 41.0 24 36.2528929370965 38.0 34.0 40.0 30.0 41.0 25 35.8499927898197 38.0 34.0 40.0 29.0 41.0 26 35.908849137024156 38.0 34.0 40.0 30.0 41.0 27 35.895698240952406 38.0 34.0 40.0 30.0 41.0 28 35.80100611565129 38.0 34.0 40.0 29.0 41.0 29 35.922654859306924 38.0 34.0 40.0 30.0 41.0 30 35.49767737634541 38.0 34.0 40.0 28.0 41.0 31 35.623522208537324 38.0 34.0 40.0 29.0 41.0 32 35.612858233671304 38.0 34.0 40.0 29.0 41.0 33 35.615751761766184 38.0 34.0 40.0 29.0 41.0 34 35.569209456919765 38.0 34.0 40.0 28.0 41.0 35 35.52903102268725 38.0 34.0 40.0 28.0 41.0 36 35.35834832499238 38.0 34.0 40.0 27.0 41.0 37 35.36509279856647 38.0 34.0 40.0 28.0 41.0 38 35.28915659802417 38.0 34.0 40.0 27.0 41.0 39 35.21109280329446 37.0 34.0 40.0 27.0 41.0 40 35.155449123313 37.0 34.0 40.0 27.0 41.0 41 35.0106001470404 37.0 33.0 40.0 26.0 41.0 42 35.25067787514804 37.0 34.0 40.0 28.0 41.0 43 35.23481784247765 37.0 34.0 40.0 28.0 41.0 44 35.20082361534988 37.0 34.0 40.0 28.0 41.0 45 35.23240893305879 37.0 34.0 40.0 28.0 41.0 46 35.13541664204173 37.0 34.0 40.0 28.0 41.0 47 35.04343838132634 37.0 34.0 40.0 27.0 41.0 48 35.00859784451069 37.0 34.0 40.0 27.0 41.0 49 35.04151645457705 37.0 34.0 40.0 27.0 41.0 50 34.84131693352214 37.0 33.0 40.0 27.0 41.0 51 33.71493311080274 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 1.0 12 3.0 13 11.0 14 16.0 15 30.0 16 46.0 17 109.0 18 177.0 19 374.0 20 679.0 21 1177.0 22 1878.0 23 2600.0 24 3264.0 25 4281.0 26 5284.0 27 6316.0 28 8111.0 29 10093.0 30 13152.0 31 16799.0 32 21716.0 33 28844.0 34 39225.0 35 39786.0 36 48200.0 37 60912.0 38 73032.0 39 36891.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.98498627701749 4.293485070198788 51.15752943762958 17.563999215154144 2 18.588081217362117 7.587237271667774 52.5806535496545 21.24402796131561 3 21.175235749255933 7.451071243673363 50.91711129445194 20.45658171261876 4 19.991820582346172 5.129629585851971 48.49519991111384 26.383349920688016 5 21.28161545862657 5.724410360910894 48.37298144501469 24.620992735447846 6 22.22815847267105 9.130215856250281 51.0057610522608 17.635864618817862 7 82.57807679669419 2.4429509258580704 10.998952750861084 3.9800195265866534 8 84.39882462241113 5.6390701940602295 5.8196793006361505 4.142425882892488 9 79.3304224692858 5.031996652585145 7.390316609655022 8.247264268474018 10 43.590149711710986 23.85033084089614 16.626912175275937 15.932607272116933 11 33.06163167562226 23.95883814445419 23.482493445827906 19.497036734095644 12 27.977863564476742 21.131265469382736 29.06104540522395 21.829825560916568 13 26.44150416181063 22.862417939874188 30.76973993707049 19.926337961244688 14 21.02441296130379 26.09446990990821 31.44584208995941 21.435275038828593 15 18.773891109729487 23.490294624515084 36.36862224092404 21.36719202483139 16 23.344672622354395 22.31940862337564 30.566200093141344 23.769718661128618 17 24.13259166975956 23.945836179975558 28.22017290248763 23.701399247777253 18 24.345351088500827 22.66691567398638 29.8704767938574 23.117256443655396 19 24.671109398529122 24.258828924879378 27.416887897062264 23.653173779529236 20 26.141040582677128 26.430866190873566 28.709519565592544 18.71857366085676 21 25.893294059520628 26.468217288830363 28.580209118868687 19.05827953278032 22 23.916522660060092 23.247748887150042 30.06125107266207 22.7744773801278 23 23.2869911799401 25.180313607383226 29.290825577464524 22.241869635212154 24 23.42457560405945 25.242486637526508 28.676187256656416 22.65675050175763 25 23.327651868855096 27.387337977792647 26.05522761711815 23.22978253623411 26 21.56482188490661 26.35521839754334 27.592532617200888 24.487427100349162 27 22.466212622307115 26.139149387843872 28.773347391214926 22.621290598634083 28 19.022819629656773 27.206019673154252 30.489843101748647 23.281317595440328 29 22.290095103460178 25.711030157465608 29.080430152264825 22.91844458680939 30 23.162172320945217 26.71407261715361 28.2769087474853 21.84684631441587 31 23.871843182124426 25.839395006772843 27.368426029460085 22.920335781642645 32 27.39986714356296 26.633460437386088 25.017670851723235 20.94900156732772 33 25.618834409344394 25.755000437338804 25.160928860342352 23.46523629297445 34 22.452974258474327 26.276733811963226 27.452347800185812 23.817944129376638 35 23.197395824714604 27.66179762796888 26.136548994948143 23.00425755236837 36 23.706127234860393 29.5903435591814 25.312933645065282 21.390595560892926 37 22.075444489885655 28.798169323401407 26.716909409403495 22.409476777309443 38 24.482462713911865 26.388077907771155 25.957358284497168 23.172101093819812 39 23.968057719266312 26.690905480446226 25.598504064886896 23.742532735400566 40 25.820246659086127 24.38246578710347 26.343871228543804 23.4534163252666 41 20.842385458602926 25.98667180441263 26.019767713994607 27.151175022989836 42 22.43595350497502 25.938919134872922 27.732481034861813 23.89264632529024 43 21.74874058244073 26.788774813067214 27.61049896811682 23.851985636375243 44 22.7354714866919 25.23492185819348 27.80647403271294 24.223132622401675 45 22.288440307981077 24.55598291305468 26.52282553964063 26.632751239323614 46 23.20945219177661 26.398006680645747 26.584525771075597 23.808015356502047 47 20.405046653412544 26.846692654835667 29.951088973624923 22.797171718126865 48 21.751577374690612 26.71241782167451 28.09937283251342 23.436631971121454 49 23.006621545909937 25.116722181115 29.06151820393227 22.815138069042796 50 22.51041930153447 25.73821608319366 26.842910265169156 24.908454350102716 51 21.541654748199228 25.388817837749666 26.236073123048225 26.83345429100288 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 57.0 1 226.0 2 395.0 3 651.0 4 907.0 5 686.5 6 466.0 7 490.5 8 515.0 9 537.5 10 560.0 11 600.5 12 641.0 13 654.0 14 667.0 15 719.0 16 771.0 17 770.5 18 770.0 19 884.0 20 998.0 21 1112.0 22 1226.0 23 1327.0 24 1428.0 25 2099.5 26 3255.5 27 3740.0 28 4155.5 29 4571.0 30 5583.5 31 6596.0 32 8016.0 33 9436.0 34 11128.5 35 12821.0 36 13388.0 37 13955.0 38 15058.5 39 16162.0 40 18214.5 41 20267.0 42 22167.5 43 24068.0 44 25612.5 45 27157.0 46 32975.0 47 38793.0 48 37983.0 49 37173.0 50 36233.0 51 35293.0 52 32248.5 53 29204.0 54 27677.0 55 26150.0 56 25148.0 57 24146.0 58 22659.0 59 21172.0 60 19427.5 61 17683.0 62 15698.0 63 13713.0 64 11992.0 65 10271.0 66 8446.5 67 6622.0 68 5469.0 69 4316.0 70 3614.0 71 2912.0 72 2436.5 73 1961.0 74 1597.5 75 960.5 76 687.0 77 553.5 78 420.0 79 310.0 80 200.0 81 140.5 82 81.0 83 54.0 84 27.0 85 15.0 86 3.0 87 4.0 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 423013.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.370656487888915 #Duplication Level Percentage of deduplicated Percentage of total 1 73.33535592286825 25.20584326841974 2 8.669218096457733 5.95933434423878 3 3.0962521677904182 3.192606589770176 4 1.7304732341800144 2.3791000437394976 5 1.290067950183403 2.217024118089437 6 1.1297579399382836 2.3298313240850272 7 1.008782248594107 2.427075569625575 8 0.9668231681234019 2.658427759688154 9 0.9073428655776828 2.806737295455658 >10 7.751142780452019 44.46724493365862 >50 0.0793050505766646 1.8372623637935095 >100 0.028521991874063582 1.7475989871117596 >500 0.004173950030350768 0.9621478073796307 >1k 0.002782633353567179 1.8097655949444396 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGC 2676 0.6326046717240369 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCG 2393 0.565703654497616 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 1478 0.34939824544399345 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATGGCGAT 1022 0.24160013994841767 No Hit CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 858 0.20283064586667549 No Hit GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 842 0.19904825620016406 No Hit CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT 691 0.16335195372246245 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 573 0.13545682993194064 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 532 0.1257644564115051 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATGGCGATCGTA 528 0.12481885899487723 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18226390205501958 0.0 2 0.0 0.0 0.0 0.7895738428842612 0.0 3 0.0 0.0 0.0 1.037083966686603 0.0 4 0.0 0.0 0.0 1.4538560280653314 0.0 5 0.0 0.0 0.0 2.3876334769853407 0.0 6 0.0 0.0 0.0 2.733722131471137 0.0 7 0.0 0.0 0.0 3.162786959266027 0.0 8 0.0 0.0 0.0 3.802956410323087 0.0 9 0.0 0.0 0.0 4.031081787084558 0.0 10 0.0 0.0 0.0 5.13364837487264 0.0 11 0.0 0.0 0.0 6.035984709689773 0.0 12 0.0 0.0 0.0 7.590546862625971 0.0 13 0.0 0.0 0.0 7.932380328736942 0.0 14 0.0 0.0 0.0 8.076820334126847 0.0 15 0.0 0.0 0.0 8.387685484843255 0.0 16 0.0 0.0 0.0 8.813677121034106 0.0 17 0.0 0.0 0.0 9.372525194261168 0.0 18 0.0 0.0 0.0 10.007021060818461 0.0 19 0.0 0.0 0.0 10.693051986581972 0.0 20 0.0 0.0 0.0 11.201546997373603 0.0 21 0.0 0.0 0.0 11.8294236820145 0.0 22 0.0 0.0 0.0 12.536021351589667 0.0 23 0.0 0.0 0.0 13.182809984563121 0.0 24 0.0 0.0 0.0 13.69225059277138 0.0 25 0.0 0.0 0.0 14.165758499147781 0.0 26 0.0 0.0 0.0 14.608770888837931 0.0 27 0.0 0.0 0.0 15.062657648819304 0.0 28 0.0 0.0 0.0 15.507797632696867 0.0 29 0.0 0.0 0.0 16.00990986092626 0.0 30 0.0 0.0 0.0 16.593816265693963 0.0 31 0.0 0.0 0.0 17.1110580525894 0.0 32 0.0 0.0 0.0 17.591185140882196 0.0 33 0.0 0.0 0.0 18.072730625299933 0.0 34 0.0 0.0 0.0 18.596827993465922 0.0 35 0.0 0.0 0.0 19.162058849255224 0.0 36 0.0 0.0 0.0 19.679773434858976 0.0 37 0.0 0.0 0.0 20.207653192691478 0.0 38 0.0 0.0 0.0 20.78919560391761 0.0 39 0.0 0.0 0.0 21.660327223986023 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGATA 30 2.1622363E-6 45.000004 8 CGATCGA 65 0.0 45.000004 41 ACAACGA 20 7.028227E-4 45.0 13 ACCGGTA 20 7.028227E-4 45.0 41 ATTCCGA 20 7.028227E-4 45.0 12 CCGGTAT 20 7.028227E-4 45.0 42 CGATAAC 20 7.028227E-4 45.0 16 TACCGGT 25 3.8866114E-5 45.0 40 CGTTCAT 85 0.0 42.352943 17 CCGATGA 405 0.0 41.666668 18 TCTTGCG 90 0.0 40.000004 1 GTTAGGG 135 0.0 40.0 3 CGTTTGG 295 0.0 39.661015 2 TTTGGGC 940 0.0 39.255318 4 CGATGAA 430 0.0 39.244186 19 TACGGCT 380 0.0 39.078945 7 TTGGGAC 760 0.0 39.078945 5 CCGATCG 75 0.0 39.0 40 ACACGCG 145 0.0 38.793106 36 TGCTACG 35 6.23893E-6 38.571426 4 >>END_MODULE