##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934065.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 754871 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.88816499772809 31.0 30.0 31.0 25.0 34.0 2 29.77303009388359 31.0 30.0 33.0 25.0 34.0 3 29.876193415828666 31.0 30.0 33.0 25.0 34.0 4 33.85681262096438 35.0 33.0 37.0 28.0 37.0 5 34.411784265126094 35.0 35.0 37.0 32.0 37.0 6 33.653221543813444 35.0 33.0 37.0 28.0 37.0 7 34.347681921811805 35.0 35.0 37.0 32.0 37.0 8 34.10057612492731 35.0 35.0 37.0 30.0 37.0 9 35.739334270358775 37.0 35.0 39.0 30.0 39.0 10 35.2489458463764 37.0 34.0 39.0 30.0 39.0 11 35.42720014413059 37.0 35.0 39.0 30.0 39.0 12 35.481796227434884 37.0 35.0 39.0 30.0 39.0 13 35.448354752003986 37.0 35.0 39.0 30.0 39.0 14 36.22107485914812 38.0 35.0 40.0 30.0 41.0 15 36.38875913897871 38.0 35.0 40.0 30.0 41.0 16 36.633424783837235 38.0 35.0 40.0 31.0 41.0 17 36.25238881875181 38.0 35.0 40.0 30.0 41.0 18 36.41626582555165 38.0 35.0 40.0 30.0 41.0 19 36.393476501283004 38.0 35.0 40.0 30.0 41.0 20 36.27766466058439 38.0 34.0 40.0 30.0 41.0 21 36.13883299265702 38.0 34.0 40.0 30.0 41.0 22 36.300891145639454 38.0 35.0 40.0 30.0 41.0 23 36.244402023657024 38.0 34.0 40.0 30.0 41.0 24 36.17467620295388 38.0 34.0 40.0 30.0 41.0 25 35.84422768923432 38.0 34.0 40.0 29.0 41.0 26 35.896021969316614 38.0 34.0 40.0 29.0 41.0 27 35.829997443271765 38.0 34.0 40.0 29.0 41.0 28 35.70332281939563 38.0 34.0 40.0 29.0 41.0 29 35.83632832629681 38.0 34.0 40.0 29.0 41.0 30 35.42949325116477 38.0 34.0 40.0 27.0 41.0 31 35.63938209309935 38.0 34.0 40.0 29.0 41.0 32 35.55133658598621 38.0 34.0 40.0 27.0 41.0 33 35.550091340109766 38.0 34.0 40.0 27.0 41.0 34 35.46824689251541 38.0 34.0 40.0 27.0 41.0 35 35.45048624202016 38.0 34.0 40.0 27.0 41.0 36 35.348193267458946 38.0 34.0 40.0 27.0 41.0 37 35.49113954569721 38.0 34.0 40.0 28.0 41.0 38 35.29674606654647 38.0 34.0 40.0 27.0 41.0 39 35.19704161373268 38.0 34.0 40.0 27.0 41.0 40 35.272810851125556 38.0 34.0 40.0 27.0 41.0 41 35.06011225759103 37.0 33.0 40.0 26.0 41.0 42 35.16424793110346 38.0 34.0 40.0 27.0 41.0 43 35.1427594913568 38.0 34.0 40.0 27.0 41.0 44 35.17431455175785 38.0 34.0 40.0 27.0 41.0 45 35.1952876716684 38.0 34.0 40.0 27.0 41.0 46 35.12096901324862 37.0 34.0 40.0 27.0 41.0 47 34.975205035032474 37.0 34.0 40.0 26.0 41.0 48 35.017542070102046 37.0 34.0 40.0 27.0 41.0 49 35.03765014154737 37.0 34.0 40.0 27.0 41.0 50 34.805834374350056 37.0 34.0 40.0 26.0 41.0 51 33.81476172750046 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 7.0 11 10.0 12 8.0 13 17.0 14 16.0 15 35.0 16 76.0 17 178.0 18 337.0 19 695.0 20 1430.0 21 2710.0 22 4327.0 23 5850.0 24 7158.0 25 8156.0 26 9326.0 27 11341.0 28 13966.0 29 17918.0 30 23475.0 31 29708.0 32 38068.0 33 48921.0 34 66147.0 35 70901.0 36 85708.0 37 108917.0 38 131264.0 39 68195.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.295204081227123 4.432545428291721 49.93859878045388 16.333651710027276 2 18.90985347165277 10.965847144743938 49.93634674003903 20.187952643564262 3 20.8063364468896 10.841852448961479 48.54167135841753 19.81013974573139 4 18.80784928815652 4.952236872260293 50.79543392182241 25.44447991776078 5 23.335245359803196 5.770787326576329 46.28751137611592 24.606455937504553 6 21.00040934146364 12.303691624131806 49.23384260357068 17.46205643083388 7 80.0493064377887 2.3462286933793983 13.711614302311256 3.892850566520637 8 81.42808506354065 8.40143547705502 5.827353282878796 4.343126176525526 9 76.23209793461399 4.8785819033980635 7.568577942456393 11.32074221953155 10 41.97723849505412 28.372662348931144 14.92148989694928 14.728609259065456 11 31.670179408137283 25.237027253663207 24.346808924968638 18.74598441323087 12 25.358637436065234 22.030651594775797 28.224425100447625 24.386285868711344 13 25.939928809028295 22.015814622630884 31.630569991429 20.413686576911815 14 20.88025636168299 28.312519622558025 29.09662710582338 21.710596909935607 15 18.68451695720196 24.193802649724258 33.869230636757806 23.25244975631598 16 21.376765036675142 23.718092230328093 29.002173881365163 25.902968851631602 17 20.761030692661393 26.331386422315866 30.0079086360451 22.89967424897764 18 21.47148320706452 23.99535814728609 29.11424601024546 25.418912635403927 19 22.431249842688352 26.1569195266476 27.633728146928416 23.77810248373563 20 26.81835704378629 25.408844690019883 29.285798500670975 18.486999765522853 21 24.978837443748667 28.92229268312069 26.453129077683474 19.64574079544717 22 22.8882815739378 23.626685884078206 30.637685114410278 22.84734742757372 23 23.912032651936556 26.687076334896958 27.722087614969976 21.678803398196514 24 22.19756753140603 26.072666720539004 28.35835526864855 23.371410479406414 25 21.4884397466587 29.878085129777144 25.89237101438524 22.74110410917892 26 20.67147896792962 26.66786775488792 29.082717444437527 23.57793583274493 27 22.723882623653576 27.29035822014622 26.79318718032617 23.192571975874024 28 18.597217272885036 28.88082864489429 30.11627152188917 22.4056825603315 29 20.987824409733584 25.124160286989433 29.170547020616766 24.717468282660214 30 20.451706318033146 28.42896335930245 28.40233629322096 22.71699402944344 31 22.28486721572295 26.616600717208637 25.17728194618683 25.921250120881584 32 24.313028318745854 27.65015479466028 25.032091575911647 23.004725310682222 33 23.650663490848107 24.614801734336066 25.61589993522072 26.11863483959511 34 21.867312428216213 26.25349231855509 27.851248756410037 24.02794649681866 35 22.17094046532454 25.23927929407806 27.279098018071963 25.310682222525436 36 21.638796562591487 30.735450163007982 25.281803116029096 22.34395015837143 37 20.072568690544475 26.26872670959674 27.873636687592978 25.785067912265802 38 20.34228364846444 28.18812750787883 25.468987416393002 26.00060142726373 39 21.06200927045813 26.322908152518774 27.560205651031765 25.054876925991326 40 20.286247584024288 23.968333662307863 29.353227240150964 26.392191513516877 41 20.1896747921168 25.02056642790623 29.306861702198123 25.482897077778855 42 21.559312783243758 24.34667645200306 29.56730355252752 24.526707212225666 43 22.885897060557365 25.74400129293614 26.132147082084224 25.237954564422267 44 21.072739580670074 24.50100745690323 29.212011058843167 25.214241903583527 45 20.555167704150776 24.806092696632934 27.464427696917753 27.174311902298538 46 22.513648027278833 26.44783015906029 27.04780022017007 23.990721593490807 47 18.281004304046654 26.701913307041863 31.014968120380832 24.00211426853065 48 20.41222937429044 26.057034910600617 28.86188501081642 24.668850704292524 49 21.04439036603605 23.401216896661815 31.352509236677523 24.20188350062461 50 21.633762589899465 24.33117711503025 28.18415331891144 25.85090697615884 51 19.82749370422231 23.6461594100184 28.3962425368043 28.130104348954987 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 127.0 1 383.0 2 639.0 3 1264.0 4 1889.0 5 1426.0 6 963.0 7 943.5 8 924.0 9 990.0 10 1056.0 11 1046.5 12 1037.0 13 1093.0 14 1149.0 15 1160.5 16 1172.0 17 1259.5 18 1347.0 19 1553.0 20 1759.0 21 2201.0 22 2643.0 23 2987.5 24 3332.0 25 4006.5 26 6414.5 27 8148.0 28 9129.0 29 10110.0 30 11771.0 31 13432.0 32 15406.5 33 17381.0 34 19934.0 35 22487.0 36 24178.0 37 25869.0 38 28339.5 39 30810.0 40 33879.5 41 36949.0 42 39653.5 43 42358.0 44 44983.0 45 47608.0 46 64488.5 47 81369.0 48 75315.5 49 69262.0 50 66069.5 51 62877.0 52 57420.0 53 51963.0 54 47806.0 55 43649.0 56 41334.5 57 39020.0 58 37029.0 59 35038.0 60 31757.5 61 28477.0 62 24673.0 63 20869.0 64 18072.5 65 15276.0 66 12854.0 67 10432.0 68 8647.0 69 6862.0 70 5743.0 71 4624.0 72 3962.5 73 3301.0 74 2616.0 75 1491.5 76 1052.0 77 791.5 78 531.0 79 374.0 80 217.0 81 191.0 82 165.0 83 119.0 84 73.0 85 40.5 86 8.0 87 6.5 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 754871.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.69660746741417 #Duplication Level Percentage of deduplicated Percentage of total 1 74.33787060295887 22.81920433862456 2 8.814057871115917 5.41123349329435 3 2.934942126149613 2.7027829915797796 4 1.610375322458544 1.977322365948818 5 1.0100467322783957 1.5502504032247142 6 0.8288379246103733 1.5265507455522511 7 0.7046087153534947 1.5140368007327634 8 0.6594329738117224 1.619388411853444 9 0.615633548991226 1.7008075257439284 >10 8.318602168387693 49.123541207089474 >50 0.10995660183025227 2.2282323609248764 >100 0.04731200395133443 2.523940444522285 >500 0.003504592885284032 0.7397408698021786 >1k 0.003942666995944536 2.374002056987395 >5k 8.76148221321008E-4 2.188965984119226 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGC 8969 1.1881500282829782 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCG 7309 0.9682449054209263 No Hit GAATCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTC 4633 0.6137472495300522 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACACCTTGT 3007 0.3983462074977049 No Hit GCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGC 2228 0.295149767311236 TruSeq Adapter, Index 20 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACACCTTGTCGTA 1871 0.2478569185993368 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTC 1307 0.173142166012471 No Hit GAACTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCT 1248 0.16532626104327758 No Hit GAATGACTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCT 1212 0.1605572342824138 No Hit CCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGC 1132 0.14995939703604988 TruSeq Adapter, Index 20 (95% over 23bp) CTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGCT 1016 0.13459253302882215 TruSeq Adapter, Index 22 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 979 0.1296910333023788 No Hit TCTGTCTCTTATACACATCTGACGCACACCTTGTCGTATGCCGTCTTCTGC 908 0.12028545274623081 TruSeq Adapter, Index 20 (95% over 23bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 809 0.10717062915385543 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14519037027518608 0.0 2 0.0 0.0 0.0 0.781060605057023 0.0 3 0.0 0.0 0.0 0.989175633982495 0.0 4 0.0 0.0 0.0 1.4854193630434869 0.0 5 0.0 0.0 0.0 2.689466147196011 0.0 6 0.0 0.0 0.0 3.0493951946756463 0.0 7 0.0 0.0 0.0 3.5323916271786837 0.0 8 0.0 0.0 0.0 4.204956873426055 0.0 9 0.0 0.0 0.0 4.43572477946563 0.0 10 0.0 0.0 0.0 5.960356140320664 0.0 11 0.0 0.0 0.0 6.783675621397563 0.0 12 0.0 0.0 0.0 9.006174564925663 0.0 13 0.0 0.0 0.0 9.364646409783923 0.0 14 0.0 0.0 0.0 9.529442778964883 0.0 15 0.0 0.0 0.0 9.978261186348396 0.0 16 0.0 0.0 0.0 10.418866269865978 0.0 17 0.0 0.0 0.0 10.963065212466766 0.0 18 0.0 0.0 0.0 11.507926519895452 0.0 19 0.0 0.0 0.0 12.41072978032008 0.0 20 0.0 0.0 0.0 12.892533956132903 0.0 21 0.0 0.0 0.0 13.476077369510817 0.0 22 0.0 0.0 0.0 14.133408224716542 0.0 23 0.0 0.0 0.0 14.736822582931389 0.0 24 0.0 0.0 0.0 15.230549325646368 0.0 25 0.0 0.0 0.0 15.669167314680257 0.0 26 0.0 0.0 0.0 16.06473158990079 0.0 27 0.0 0.0 0.0 16.489704863479986 0.0 28 0.0 0.0 0.0 16.91149878588527 0.0 29 0.0 0.0 0.0 17.360052247337624 0.0 30 0.0 0.0 0.0 17.880406056134095 0.0 31 0.0 0.0 0.0 18.350420138010335 0.0 32 0.0 0.0 0.0 18.79950349132501 0.0 33 0.0 0.0 0.0 19.274021654030953 0.0 34 0.0 0.0 0.0 19.737809506524957 0.0 35 0.0 0.0 0.0 20.240676883864925 0.0 36 0.0 0.0 0.0 20.73095932947484 0.0 37 0.0 0.0 0.0 21.222434031774966 0.0 38 0.0 0.0 0.0 21.71245153145372 0.0 39 0.0 0.0 0.0 22.205648382306382 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATAC 35 1.2111923E-7 45.000004 45 TCGTACG 30 2.1645083E-6 45.000004 30 CCGATCG 25 3.889529E-5 45.0 40 ATAGCCG 20 7.0317474E-4 45.0 23 TACGGGA 90 0.0 45.0 4 CGTAACA 20 7.0317474E-4 45.0 30 CGATCGA 25 3.889529E-5 45.0 41 CGGGATA 185 0.0 41.351353 6 ACCGGTC 60 3.6379788E-12 41.250004 39 TACGGCT 1195 0.0 40.857742 7 CGATGAA 1375 0.0 40.745457 19 ATGAATG 1525 0.0 39.836067 21 CGGTCGA 85 0.0 39.705883 41 CGTTCAT 165 0.0 39.545452 17 CGTAAGC 40 3.4561162E-7 39.375 43 CCGCGTA 40 3.4561162E-7 39.375 40 TTGGGAC 1445 0.0 39.083046 5 TGGGTAC 265 0.0 39.056602 6 TTTGGGC 1590 0.0 38.915092 4 GCGAACC 35 6.2454383E-6 38.57143 33 >>END_MODULE