##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934064.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 432229 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.11300722533657 31.0 30.0 31.0 26.0 34.0 2 30.421491848071277 31.0 30.0 33.0 27.0 34.0 3 30.46988054943097 31.0 30.0 34.0 26.0 34.0 4 34.079779468753834 35.0 33.0 37.0 30.0 37.0 5 34.48397030277931 35.0 35.0 37.0 32.0 37.0 6 34.01607712578286 35.0 35.0 37.0 30.0 37.0 7 34.50326563002483 35.0 35.0 37.0 32.0 37.0 8 34.74089429445965 35.0 35.0 37.0 32.0 37.0 9 36.05271511166534 38.0 35.0 39.0 31.0 39.0 10 35.28400917106441 37.0 34.0 39.0 30.0 39.0 11 35.41958776481911 37.0 35.0 39.0 30.0 39.0 12 35.46576467566961 37.0 35.0 39.0 30.0 39.0 13 35.51234646448989 37.0 35.0 39.0 30.0 39.0 14 36.208072572640894 38.0 35.0 40.0 30.0 41.0 15 36.48985838525412 38.0 35.0 40.0 30.0 41.0 16 36.62634159207272 38.0 35.0 40.0 31.0 41.0 17 36.36687033956537 38.0 35.0 40.0 30.0 41.0 18 36.49580893461568 38.0 35.0 40.0 31.0 41.0 19 36.48754479685537 38.0 35.0 40.0 30.0 41.0 20 36.53045492088685 38.0 35.0 40.0 30.0 41.0 21 36.223284416362624 38.0 34.0 40.0 30.0 41.0 22 36.42792362381978 38.0 35.0 40.0 30.0 41.0 23 36.461149066814116 38.0 35.0 40.0 30.0 41.0 24 36.36712714787763 38.0 35.0 40.0 30.0 41.0 25 35.85222185461873 38.0 34.0 40.0 29.0 41.0 26 35.98379562685521 38.0 34.0 40.0 30.0 41.0 27 36.02619213426216 38.0 34.0 40.0 30.0 41.0 28 35.89822987351612 38.0 34.0 40.0 29.0 41.0 29 36.06811204245898 38.0 34.0 40.0 30.0 41.0 30 35.546811990865955 38.0 34.0 40.0 28.0 41.0 31 35.71658310756567 38.0 34.0 40.0 29.0 41.0 32 35.773853674788135 38.0 34.0 40.0 29.0 41.0 33 35.81177107505512 38.0 34.0 40.0 29.0 41.0 34 35.80798604443478 38.0 34.0 40.0 29.0 41.0 35 35.827103225373584 38.0 34.0 40.0 29.0 41.0 36 35.575544445189934 38.0 34.0 40.0 28.0 41.0 37 35.58671676356746 38.0 34.0 40.0 29.0 41.0 38 35.47346429786062 38.0 34.0 40.0 28.0 41.0 39 35.44778346663458 38.0 34.0 40.0 28.0 41.0 40 35.395815644022036 38.0 34.0 40.0 28.0 41.0 41 35.2689569649422 38.0 34.0 40.0 27.0 41.0 42 35.45079113155295 38.0 34.0 40.0 28.0 41.0 43 35.41569399554403 38.0 34.0 40.0 28.0 41.0 44 35.36064447318435 38.0 34.0 40.0 28.0 41.0 45 35.43588005432306 38.0 34.0 40.0 28.0 41.0 46 35.31320202947974 37.0 34.0 40.0 28.0 41.0 47 35.23172901401803 37.0 34.0 40.0 28.0 41.0 48 35.187632019138 37.0 34.0 40.0 28.0 41.0 49 35.160563034872716 37.0 34.0 40.0 28.0 41.0 50 34.98791381420497 37.0 34.0 40.0 27.0 41.0 51 33.88448484483919 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 3.0 11 8.0 12 5.0 13 9.0 14 14.0 15 27.0 16 55.0 17 84.0 18 165.0 19 329.0 20 587.0 21 946.0 22 1400.0 23 2088.0 24 2815.0 25 3836.0 26 4957.0 27 6232.0 28 8059.0 29 10229.0 30 13234.0 31 16544.0 32 21504.0 33 28319.0 34 38359.0 35 41585.0 36 50216.0 37 64990.0 38 77843.0 39 37783.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.900524953207675 4.423349659555467 55.08931608013344 16.58680930710341 2 20.34130056058247 4.446022825863142 55.14738714894188 20.06528946461251 3 21.42729895495212 4.317155952053194 53.153536666905744 21.102008426088947 4 19.48828051796617 4.847661771884812 49.46521404163071 26.198843668518307 5 18.33727028959186 5.530633067193548 51.66312302043593 24.468973622778666 6 22.143817282042622 6.865804932107748 53.84853862188793 17.1418391639617 7 85.51462303547424 1.9015383049263237 8.743281917687153 3.8405567419122733 8 88.1863549183419 2.798053809438978 5.20117807921264 3.814413193006485 9 82.74317549262081 4.939048513635133 7.144823692996074 5.1729523007479825 10 40.793653364304575 28.020563173688025 16.477145217003024 14.708638245004385 11 30.65782258941441 27.5205967207198 22.932750926013757 18.888829763852033 12 26.176633219890384 24.11800226268945 28.70954979883349 20.995814718586676 13 24.67904744938447 25.78031552718582 30.035698668992595 19.504938354437115 14 21.2523916720072 28.420813966670444 29.57645137184224 20.750342989480114 15 19.95215499191401 27.135846970008952 33.119480645676255 19.79251739240079 16 22.13340613424828 25.450629180365038 30.680033038042332 21.735931647344348 17 22.313866029350184 26.331643642606117 28.232025153333073 23.122465174710626 18 22.909152324346586 25.611192215237754 28.843275208280794 22.636380252134863 19 24.274169479604563 27.831774360350646 26.992635848126806 20.901420311917988 20 26.52644778578022 27.121271363096877 27.634887987617674 18.717392863505225 21 25.784479986303555 26.981067906133095 27.299880387479785 19.934571720083564 22 24.986291988737452 25.76111274347626 26.402439447607634 22.850155820178657 23 22.979485411668353 27.921310231381973 25.88627787584822 23.212926481101455 24 23.193955056231765 26.656008736109793 27.6948099271451 22.455226280513337 25 22.193328073775707 28.676465484731473 26.190052032603088 22.940154408889732 26 22.7985627988867 28.899032688690486 27.01276406719586 21.28964044522695 27 23.296215663456177 28.059431458786893 27.941669809290907 20.702683068466023 28 21.003680919142397 28.232719229852695 29.535963574864248 21.227636276140657 29 22.135719722647025 26.76844913228867 28.180200773201243 22.915630371863063 30 23.934303343829313 27.535866404151506 27.680002961393154 20.84982729062603 31 24.055535375923412 28.360660668303144 25.57741382461612 22.00639013115733 32 24.07843990107096 30.542837245996914 24.71351991652573 20.665202936406395 33 24.433575720277908 28.495542871949826 25.458032663241013 21.612848744531256 34 23.061849158663577 28.31739656524666 26.32354608321052 22.297208192879236 35 23.788084557028796 28.19616453315256 25.564689088423037 22.4510618213956 36 25.07791008932765 27.981463529749277 25.7257148409755 21.214911539947572 37 22.84113282542356 29.927191373091578 27.575891483449745 19.655784318035117 38 22.04109395713846 30.24646657211802 26.048229063760182 21.664210406983337 39 23.327680465679073 29.173655631621198 26.247660383731773 21.251003518967952 40 24.349129743723815 27.915757619224994 26.549120952087897 21.185991684963295 41 22.01749535547129 28.446957515576234 26.216195581508877 23.319351547443603 42 22.485765647376738 28.621864798521152 26.33141228376624 22.560957270335862 43 22.61925969798417 28.019175020648778 27.37622880463828 21.98533647672877 44 22.027212426746008 28.018943661808905 27.05255778765423 22.90128612379086 45 23.045422681032505 27.402603712383943 25.486721159385418 24.06525244719813 46 24.05993119388102 28.11819660411495 26.01907784993603 21.802794352068 47 21.837960895728884 28.80949681765916 27.75866496695039 21.59387731966157 48 22.57391336536882 27.473862235065212 27.55414375250157 22.398080647064404 49 22.990127918302566 27.085873460596122 28.227397976535585 21.696600644565727 50 22.395535699825786 27.555069187861065 26.53014952721821 23.51924558509494 51 22.116748297777335 27.298260875600665 25.314127464839242 25.27086336178276 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 88.0 1 231.0 2 374.0 3 671.0 4 968.0 5 735.5 6 503.0 7 552.5 8 602.0 9 707.5 10 813.0 11 905.5 12 998.0 13 1045.5 14 1093.0 15 1127.0 16 1161.0 17 1116.5 18 1072.0 19 1198.0 20 1324.0 21 1515.0 22 1706.0 23 1861.0 24 2016.0 25 2351.5 26 3487.0 27 4287.0 28 5057.0 29 5827.0 30 6589.0 31 7351.0 32 8921.5 33 10492.0 34 11284.5 35 12077.0 36 13255.5 37 14434.0 38 16226.5 39 18019.0 40 20065.0 41 22111.0 42 24167.0 43 26223.0 44 28847.0 45 31471.0 46 35401.0 47 39331.0 48 41523.5 49 43716.0 50 42268.5 51 40821.0 52 35867.5 53 30914.0 54 28073.0 55 25232.0 56 22965.0 57 20698.0 58 19072.0 59 17446.0 60 16333.0 61 15220.0 62 12923.5 63 10627.0 64 9014.0 65 7401.0 66 5986.5 67 4572.0 68 3762.5 69 2953.0 70 2612.0 71 2271.0 72 1819.0 73 1367.0 74 1127.0 75 754.5 76 622.0 77 425.5 78 229.0 79 172.0 80 115.0 81 93.5 82 72.0 83 53.0 84 34.0 85 18.0 86 2.0 87 1.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 432229.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.310521835717054 #Duplication Level Percentage of deduplicated Percentage of total 1 75.27389651644711 28.085083596364058 2 9.076160508867286 6.772725697011313 3 3.196674155305613 3.5780874261960727 4 1.728481931257933 2.5796225135536597 5 1.181875231748495 2.2048190820622686 6 0.9643130840465877 2.158741462727272 7 0.7822628580490735 2.0430644812557275 8 0.7037191934459538 2.1004904266622764 9 0.6276587407406126 2.1076447636603164 >10 6.338424706917614 42.59372231027248 >50 0.08080577445255786 2.033308436110731 >100 0.04134248925479705 2.3806068655429775 >500 0.003758408114072459 1.0164205044420194 >1k 6.264013523454099E-4 0.34566243413882425 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 1479 0.3421797241739911 No Hit CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT 970 0.22441807467800634 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC 750 0.173519129905675 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 746 0.17259369454617807 No Hit TCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 734 0.16981738846768726 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG 618 0.1429797630422762 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 531 0.1228515439732179 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC 441 0.1020292483845369 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.24871075286480082 0.0 2 0.0 0.0 0.0 1.0297781962802126 0.0 3 0.0 0.0 0.0 1.3143495693255196 0.0 4 0.0 0.0 0.0 1.7856275261493328 0.0 5 0.0 0.0 0.0 2.5653068165254993 0.0 6 0.0 0.0 0.0 2.983603599018113 0.0 7 0.0 0.0 0.0 3.426887136217144 0.0 8 0.0 0.0 0.0 4.129986650594939 0.0 9 0.0 0.0 0.0 4.413863947120624 0.0 10 0.0 0.0 0.0 5.166936970911253 0.0 11 0.0 0.0 0.0 6.368152067538272 0.0 12 0.0 0.0 0.0 7.661447982435237 0.0 13 0.0 0.0 0.0 8.022136413799167 0.0 14 0.0 0.0 0.0 8.145682034292006 0.0 15 0.0 0.0 0.0 8.352748195979446 0.0 16 0.0 0.0 0.0 8.754849859680863 0.0 17 0.0 0.0 0.0 9.472524980970736 0.0 18 0.0 0.0 0.0 10.206163862211929 0.0 19 0.0 0.0 0.0 10.807002769365313 0.0 20 0.0 0.0 0.0 11.37036154445907 0.0 21 0.0 0.0 0.0 12.144256863838383 0.0 22 0.0 0.0 0.0 12.968588410310275 0.0 23 0.0 0.0 0.0 13.803099745736635 0.0 24 0.0 0.0 0.0 14.467099616175684 0.0 25 0.0 0.0 0.0 15.06469949957083 0.0 26 0.0 0.0 0.0 15.58386873624861 0.0 27 0.0 0.0 0.0 16.10974737928274 0.0 28 0.0 0.0 0.0 16.648119399670083 0.0 29 0.0 0.0 0.0 17.23230047035252 0.0 30 0.0 0.0 0.0 17.871082227245278 0.0 31 0.0 0.0 0.0 18.4689134694803 0.0 32 0.0 0.0 0.0 19.06628199403557 0.0 33 0.0 0.0 0.0 19.637506969685052 0.0 34 0.0 0.0 0.0 20.250376536511894 0.0 35 0.0 0.0 0.0 20.89262867600277 0.0 36 0.0 0.0 0.0 21.526089179578417 0.0 37 0.0 0.0 0.0 22.134331569607777 0.0 38 0.0 0.0 0.0 22.748589289473866 0.0 39 0.0 0.0 0.0 23.39361773504323 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGGG 20 7.028395E-4 45.000004 4 GCGACTC 20 7.028395E-4 45.000004 31 GACCGGA 20 7.028395E-4 45.000004 28 ATCGTCG 20 7.028395E-4 45.000004 21 CATACTC 20 7.028395E-4 45.000004 30 GCGATGA 20 7.028395E-4 45.000004 9 GCGATAT 20 7.028395E-4 45.000004 9 TACCGAA 20 7.028395E-4 45.000004 30 CGAACGA 25 3.886753E-5 45.0 22 TCTAGCG 25 3.886753E-5 45.0 1 CGCTAGA 25 3.886753E-5 45.0 24 GTCGTTT 25 3.886753E-5 45.0 9 CGGGACG 35 1.2095734E-7 45.0 6 CTAGCGG 55 1.8189894E-12 45.0 2 TAGCGGG 150 0.0 40.5 3 TCGTCTT 50 1.0786607E-9 40.5 38 GGCGATA 45 1.9235813E-8 40.0 8 TGTTTCG 125 0.0 39.6 1 CGTTTGG 285 0.0 39.473682 2 TTTAGCG 40 3.4515506E-7 39.375004 1 >>END_MODULE