SRR2934063.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934063.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	696699
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3115	0.4471084356371977	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGC	2564	0.36802119710233544	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTC	2382	0.34189800760443173	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCG	2217	0.31821489624644217	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTTGCAAT	1013	0.14539995033723316	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	869	0.1247310531520786	No Hit
GCTGTCTCTTATACACATCTGACGCGGTTGCAATCGTATGCCGTCTTCTGC	847	0.1215733049710133	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	698	0.10018673774470754	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAATCG	50	2.1827873E-11	45.0	40
ACCGAAT	85	0.0	45.0	39
CCCGTTA	25	3.889218E-5	45.0	29
CCGAATA	20	7.031371E-4	45.0	40
CGGTCTA	25	3.889218E-5	45.0	31
CGATCGA	115	0.0	44.999996	41
CGTTTTT	2120	0.0	43.089622	1
CCGATCG	130	0.0	41.53846	40
TACGAAT	170	0.0	41.02941	12
GATGAAT	1240	0.0	40.82661	20
CCGATGA	1120	0.0	39.977676	18
CGAATAT	175	0.0	39.857143	14
ATGAATG	1270	0.0	39.68504	21
TGAATGA	1295	0.0	38.91892	22
CTCACGA	35	6.2447452E-6	38.571426	24
TTTCGCG	175	0.0	38.571426	1
TGGGCGA	905	0.0	38.53591	6
CGATGAA	1170	0.0	38.46154	19
TTTGGGA	2835	0.0	38.015873	4
TCGAATG	155	0.0	37.741936	44