SRR2934062.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934062.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	152580
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC	1191	0.7805741250491546	No Hit
GCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC	1060	0.6947175252326648	No Hit
TCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC	999	0.6547384978372002	No Hit
CTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGCT	806	0.5282474767335168	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGC	392	0.2569144055577402	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCG	315	0.20644907589461264	No Hit
TTCCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCT	263	0.17236859352470835	No Hit
TGCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTG	240	0.15729453401494298	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTC	213	0.13959889893826188	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCC	211	0.13828811115480405	No Hit
CGCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTG	205	0.13435574780443046	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	183	0.11993708218639401	No Hit
TCCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTG	171	0.11207235548564688	No Hit
TTTTTTGGGATAGCAATAATAGCTCTACTAAACCTATTCTTTTATACTCGC	158	0.10355223489317081	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGCTTG	55	1.8189894E-12	45.000004	1
TCGTTTG	45	3.8016879E-10	45.000004	1
CTTGGCG	45	3.8016879E-10	45.000004	1
CAGGTTT	20	7.0140423E-4	45.0	13
CAGCGGA	25	3.874863E-5	45.0	37
GATACTC	20	7.0140423E-4	45.0	9
AGTCATC	20	7.0140423E-4	45.0	30
GGTCGTT	25	3.874863E-5	45.0	8
AAGAGTG	25	3.874863E-5	45.0	43
TGCCAGT	25	3.874863E-5	45.0	24
CCCTAGT	20	7.0140423E-4	45.0	26
TAGGTTG	20	7.0140423E-4	45.0	14
CGCATTA	20	7.0140423E-4	45.0	15
GACAATA	35	1.2026794E-7	45.0	9
TCGGGTT	20	7.0140423E-4	45.0	5
ATTAACT	20	7.0140423E-4	45.0	15
TCAGGGC	20	7.0140423E-4	45.0	4
ATCGTGT	25	3.874863E-5	45.0	10
TAGTTGG	20	7.0140423E-4	45.0	2
TTCCCTA	25	3.874863E-5	45.0	24