##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934061.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 551028 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.943440260749 31.0 30.0 31.0 26.0 34.0 2 30.06931589683283 31.0 30.0 33.0 25.0 34.0 3 30.12356177907475 31.0 30.0 34.0 25.0 34.0 4 33.94310452463396 35.0 33.0 37.0 28.0 37.0 5 34.38973700066058 35.0 35.0 37.0 32.0 37.0 6 33.8423982084395 35.0 35.0 37.0 29.0 37.0 7 34.41557597799023 35.0 35.0 37.0 32.0 37.0 8 34.41439636461305 35.0 35.0 37.0 31.0 37.0 9 35.85561169305371 37.0 35.0 39.0 31.0 39.0 10 35.263322372002875 37.0 34.0 39.0 30.0 39.0 11 35.38304224104764 37.0 35.0 39.0 30.0 39.0 12 35.42979485615976 37.0 35.0 39.0 30.0 39.0 13 35.4111170394245 37.0 35.0 39.0 30.0 39.0 14 36.01394484490806 38.0 34.0 40.0 28.0 41.0 15 36.278666419855256 38.0 35.0 40.0 30.0 41.0 16 36.4768469115907 38.0 35.0 40.0 31.0 41.0 17 36.192438496773306 38.0 34.0 40.0 30.0 41.0 18 36.35188592957164 38.0 35.0 40.0 30.0 41.0 19 36.322067118186375 38.0 35.0 40.0 30.0 41.0 20 36.27784613486066 38.0 34.0 40.0 30.0 41.0 21 36.03052657941157 38.0 34.0 40.0 29.0 41.0 22 36.23747613551399 38.0 34.0 40.0 30.0 41.0 23 36.265726968502506 38.0 34.0 40.0 30.0 41.0 24 36.17286054429176 38.0 34.0 40.0 30.0 41.0 25 35.75678368431368 38.0 34.0 40.0 29.0 41.0 26 35.8701862700262 38.0 34.0 40.0 29.0 41.0 27 35.827830890626245 38.0 34.0 40.0 29.0 41.0 28 35.71343198530746 38.0 34.0 40.0 29.0 41.0 29 35.835523784635264 38.0 34.0 40.0 29.0 41.0 30 35.41119689017618 38.0 34.0 40.0 27.0 41.0 31 35.56935763699848 38.0 34.0 40.0 29.0 41.0 32 35.56089164252996 38.0 34.0 40.0 28.0 41.0 33 35.55606611642239 38.0 34.0 40.0 28.0 41.0 34 35.49962615329893 38.0 34.0 40.0 28.0 41.0 35 35.471796351546566 38.0 34.0 40.0 28.0 41.0 36 35.24118375109795 38.0 34.0 40.0 27.0 41.0 37 35.278806158670704 38.0 34.0 40.0 27.0 41.0 38 35.225084750684175 38.0 34.0 40.0 27.0 41.0 39 35.199271180411884 38.0 34.0 40.0 27.0 41.0 40 35.134559405329675 37.0 33.0 40.0 27.0 41.0 41 34.93410498196099 37.0 33.0 40.0 26.0 41.0 42 35.16304616099363 37.0 34.0 40.0 27.0 41.0 43 35.09819101751635 37.0 34.0 40.0 27.0 41.0 44 35.07877458132799 37.0 34.0 40.0 27.0 41.0 45 35.12520597864356 37.0 34.0 40.0 27.0 41.0 46 35.01581044883382 37.0 34.0 40.0 27.0 41.0 47 34.865210116364324 37.0 33.0 40.0 26.0 41.0 48 34.85372612644004 37.0 33.0 40.0 26.0 41.0 49 34.89207989430664 37.0 33.0 40.0 27.0 41.0 50 34.673096466967195 37.0 33.0 40.0 26.0 41.0 51 33.54884143818463 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 6.0 11 11.0 12 14.0 13 21.0 14 26.0 15 43.0 16 89.0 17 167.0 18 334.0 19 529.0 20 1096.0 21 1873.0 22 2725.0 23 3539.0 24 4469.0 25 5718.0 26 7020.0 27 8571.0 28 10954.0 29 13894.0 30 17530.0 31 22321.0 32 28583.0 33 36788.0 34 48462.0 35 52192.0 36 62913.0 37 79490.0 38 94893.0 39 46752.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.312455991347083 4.351503008921507 52.678085324157756 16.657955675573653 2 20.07484193180746 7.511596506892572 51.75236104154417 20.661200519755802 3 21.368061151157473 7.465682324673156 50.87926566345086 20.28699086071851 4 19.86323743983972 4.685787292115827 49.24776962332223 26.203205644722228 5 20.895671363342696 5.607881995107326 48.52548327852668 24.970963363023294 6 21.642275891606232 8.896825569662521 51.47125009981344 17.989648438917804 7 81.84647604114491 2.0812009553053565 11.804844762879563 4.267478240670165 8 83.80427128929927 5.257990519538027 6.546491285379327 4.391246905783372 9 78.61233911888324 4.995934870823262 8.34059249257751 8.051133517715977 10 39.97945657933898 30.984632359880077 15.227901304470917 13.808009756310025 11 29.148428029065677 23.43329195612564 28.15900462408444 19.259275390724245 12 24.998548168151164 21.319969221164804 30.91077041457058 22.770712196113447 13 24.961526456005863 22.7070130737458 32.83553648816394 19.495923982084395 14 20.466110615068565 26.858889203452456 31.869160913782967 20.805839267696015 15 17.99146322872885 23.971014177138002 36.13682063343423 21.900701960698914 16 22.393598873378483 24.055038945389345 30.79734605138033 22.75401612985184 17 21.939538462655257 25.482189652794414 29.534252342893648 23.044019541656684 18 22.63460296028514 23.201361818274208 30.74417270991674 23.419862511523913 19 22.920613834505687 24.966063430533474 29.0591403703623 23.05418236459853 20 25.528648271957145 26.758349847920616 29.52082289829192 18.192178981830324 21 24.118012151832573 27.747773252901847 29.367291680277592 18.766922914987987 22 23.052186095806384 22.58632955131137 31.919249112567783 22.442235240314467 23 22.139891257794524 25.759489535921947 29.882510507633004 22.21810869865052 24 21.783829496867675 26.718424472077647 29.32464411971805 22.17310191133663 25 23.050189827014236 28.00964742263551 26.55400451519705 22.386158235153207 26 21.664416327300973 26.103936642058116 27.86301240590315 24.368634624737762 27 22.078188404219024 26.108473616585727 29.943305966302987 21.870032012892267 28 19.33640395769362 27.273387196294923 30.90605196106187 22.484156884949584 29 21.193659850316138 25.70431992566621 30.007912483576156 23.0941077404415 30 22.041892607998143 25.703412530760687 31.244147302859382 21.010547558381788 31 23.09610400923365 26.544023171236308 27.733254934413498 22.626617885116545 32 24.596027788061587 26.645651400654774 27.23436921535748 21.52395159592616 33 23.202450692160834 24.96334124581691 27.183192142686035 24.65101591933622 34 22.182901776316267 25.94586844951618 28.70852297886859 23.162706795298966 35 23.037849256299136 26.102666289190385 27.755032412146026 23.104452042364453 36 23.449988022387245 26.8195082645528 26.872681606016393 22.857822107043564 37 20.36430090666899 27.53453545010417 29.81100778907787 22.29015585414897 38 21.246288754836414 27.447607018155157 27.307686723723656 23.99841750328477 39 20.440522078732844 27.55395370108234 27.141996413975335 24.863527806209483 40 23.09773732006359 24.876231334886796 27.816190828778208 24.209840516271406 41 20.695863005146744 25.611221208359648 27.277016775917012 26.415899010576595 42 22.80864130316427 24.721792721966942 28.738648489731922 23.73091748513687 43 22.020115130265612 24.343590525345356 28.48185573146918 25.15443861291985 44 22.144609711303236 24.68876354740594 29.132094920766278 24.034531820524546 45 21.85170263580072 23.874285880209353 27.46738822709554 26.806623256894387 46 22.695761376917325 25.56113300957483 27.782435738292794 23.96066987521505 47 18.899039613231995 27.343438083001224 30.700073317508362 23.05744898625841 48 20.288442692567347 27.647233897370004 28.807973460513804 23.256349949548845 49 22.496860413626894 24.186792685671147 30.025334465762178 23.291012434939784 50 21.25627009879716 25.136290714809412 28.00311417931575 25.604325007077684 51 20.57009807124139 25.00108887388663 27.176658899366274 27.25215415550571 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 551.0 1 656.5 2 762.0 3 1314.0 4 1866.0 5 1491.5 6 1117.0 7 1038.5 8 960.0 9 1035.5 10 1111.0 11 1171.5 12 1232.0 13 1253.5 14 1275.0 15 1192.0 16 1109.0 17 1125.5 18 1142.0 19 1272.5 20 1403.0 21 1691.0 22 1979.0 23 2192.5 24 2406.0 25 2955.5 26 4734.5 27 5964.0 28 6847.5 29 7731.0 30 9017.5 31 10304.0 32 11704.5 33 13105.0 34 14854.5 35 16604.0 36 17779.0 37 18954.0 38 20936.5 39 22919.0 40 25048.0 41 27177.0 42 29444.0 43 31711.0 44 33344.5 45 34978.0 46 44695.5 47 54413.0 48 53878.0 49 53343.0 50 51346.0 51 49349.0 52 43928.5 53 38508.0 54 35476.5 55 32445.0 56 29608.0 57 26771.0 58 24851.0 59 22931.0 60 20437.0 61 17943.0 62 15677.5 63 13412.0 64 12261.0 65 11110.0 66 9300.5 67 7491.0 68 6123.5 69 4756.0 70 3947.0 71 3138.0 72 2783.0 73 2428.0 74 1960.0 75 1190.5 76 889.0 77 616.5 78 344.0 79 282.5 80 221.0 81 178.0 82 135.0 83 82.0 84 29.0 85 21.5 86 14.0 87 7.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 551028.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.986006509877605 #Duplication Level Percentage of deduplicated Percentage of total 1 74.54194004338096 26.079247996166327 2 9.078867696055653 6.352666486330411 3 3.167674551630781 3.324728474535844 4 1.7213870999291188 2.4089784113655788 5 1.1491508187547377 2.0102099012892216 6 0.9167369628001871 1.924377920902366 7 0.8680934686913938 2.1259786622773533 8 0.7458627005808932 2.087580583839842 9 0.7263468461454372 2.2870777938906 >10 6.929613944737939 42.473135308385324 >50 0.09501014278916195 2.3554668912231693 >100 0.05091703784833098 2.8874946148993854 >500 0.004724261243659576 1.1424730648915016 >1k 0.0036744254117352256 2.540583890003059 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGC 3233 0.5867215459105526 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCG 3032 0.5502442707085665 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTC 2109 0.3827391711491975 Illumina PCR Primer Index 11 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 1550 0.2812924207118332 Illumina PCR Primer Index 11 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGCT 1346 0.24427070856653382 Illumina PCR Primer Index 11 (96% over 25bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTACAGCT 1296 0.2351967595113134 No Hit GCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 1268 0.23011534804038997 Illumina PCR Primer Index 11 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 855 0.15516452884426926 No Hit TCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 837 0.1518979071843899 Illumina PCR Primer Index 11 (95% over 24bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 834 0.15135347024107668 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 712 0.12921303454633884 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTA 710 0.12885007658413003 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTC 675 0.12249831224547574 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCT 563 0.10217266636178197 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.27403326146765683 0.0 2 0.0 0.0 0.0 1.0309820916541446 0.0 3 0.0 0.0 0.0 1.3636330640185255 0.0 4 0.0 0.0 0.0 1.9538027105700617 0.0 5 0.0 0.0 0.0 3.1795117489492366 0.0 6 0.0 0.0 0.0 3.8165029726257105 0.0 7 0.0 0.0 0.0 4.415383610270259 0.0 8 0.0 0.0 0.0 5.2258687398825465 0.0 9 0.0 0.0 0.0 5.532386738967893 0.0 10 0.0 0.0 0.0 6.723070333993917 0.0 11 0.0 0.0 0.0 7.861669461442975 0.0 12 0.0 0.0 0.0 9.537990809904397 0.0 13 0.0 0.0 0.0 9.933433509730904 0.0 14 0.0 0.0 0.0 10.09259057615947 0.0 15 0.0 0.0 0.0 10.446111631350856 0.0 16 0.0 0.0 0.0 10.896723941433104 0.0 17 0.0 0.0 0.0 11.54079284537265 0.0 18 0.0 0.0 0.0 12.222609377381911 0.0 19 0.0 0.0 0.0 13.00678005473406 0.0 20 0.0 0.0 0.0 13.551942913971704 0.0 21 0.0 0.0 0.0 14.233759445980967 0.0 22 0.0 0.0 0.0 14.984900948772113 0.0 23 0.0 0.0 0.0 15.716442721603984 0.0 24 0.0 0.0 0.0 16.294090318459315 0.0 25 0.0 0.0 0.0 16.830360707622845 0.0 26 0.0 0.0 0.0 17.282969286497238 0.0 27 0.0 0.0 0.0 17.79927698773928 0.0 28 1.814789811044085E-4 0.0 0.0 18.299796017625237 0.0 29 1.814789811044085E-4 0.0 0.0 18.86582895968989 0.0 30 1.814789811044085E-4 0.0 0.0 19.50300166234747 0.0 31 1.814789811044085E-4 0.0 0.0 20.031831413285712 0.0 32 1.814789811044085E-4 0.0 0.0 20.540698476302474 0.0 33 1.814789811044085E-4 0.0 0.0 21.05845800939335 0.0 34 1.814789811044085E-4 0.0 0.0 21.606343053347562 0.0 35 1.814789811044085E-4 0.0 0.0 22.199779321558978 0.0 36 1.814789811044085E-4 0.0 0.0 22.742945912004473 0.0 37 1.814789811044085E-4 0.0 0.0 23.310793643880167 0.0 38 1.814789811044085E-4 0.0 0.0 23.915118650957847 0.0 39 1.814789811044085E-4 0.0 0.0 24.687130236576 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 35 1.2103919E-7 45.000004 22 CCGATCG 20 7.030085E-4 45.000004 40 TAACGGA 20 7.030085E-4 45.000004 25 CGATCGA 20 7.030085E-4 45.000004 41 TATCGCG 20 7.030085E-4 45.000004 1 TACCCGC 25 3.8881535E-5 45.0 28 TCCGTTG 25 3.8881535E-5 45.0 1 ACGAACG 25 3.8881535E-5 45.0 21 TTGCGTC 30 2.1634369E-6 44.999996 1 ACGAGAC 30 2.1634369E-6 44.999996 25 CACCCGT 100 0.0 42.75 38 TCACGGG 85 0.0 42.352943 3 CGATGAA 590 0.0 41.5678 19 CCCGTTA 110 0.0 40.909092 40 GATGAAT 655 0.0 40.53435 20 CGCTCGA 50 1.0786607E-9 40.5 41 GCTCGAA 50 1.0786607E-9 40.5 42 AGAGACG 50 1.0786607E-9 40.5 33 GGCCGAT 225 0.0 40.0 8 TTTCGCG 170 0.0 39.705883 1 >>END_MODULE