SRR2934059.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934059.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	244722
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGC	1309	0.5348926537050204	No Hit
CCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC	1180	0.4821797795049076	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCG	1136	0.46420019450641953	No Hit
CTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGCT	1018	0.4159822165559287	No Hit
GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC	977	0.3992285123527921	No Hit
TCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC	900	0.367764238605438	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTC	634	0.2590694747509419	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAACACCGT	502	0.20513071975547764	No Hit
GGCTTTGGGACAGATTACTCATAGACATATAAATAAATAAATATTTTTAAA	326	0.13321237976152533	No Hit
TTTATTGGGCCACCAAAAATAAAAAAATGGACCTCTCCTGTCTTGTAGTGT	305	0.12463121419406509	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	290	0.11850181021730781	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	277	0.11318966010411816	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTCA	35	1.2066994E-7	45.000004	16
CAAACTA	20	7.0223934E-4	45.000004	36
GCGCGAC	70	0.0	45.000004	9
TTTCGTC	35	1.2066994E-7	45.000004	16
GACAATC	20	7.0223934E-4	45.000004	13
CGCGCAT	20	7.0223934E-4	45.000004	36
ATTCGTA	20	7.0223934E-4	45.000004	32
CGTTCAA	20	7.0223934E-4	45.000004	9
TCCTAAC	20	7.0223934E-4	45.000004	26
GCCGATC	20	7.0223934E-4	45.000004	9
TACGCGC	20	7.0223934E-4	45.000004	34
TCTACGG	20	7.0223934E-4	45.000004	2
CTTGCAT	20	7.0223934E-4	45.000004	38
TCGTCCC	20	7.0223934E-4	45.000004	38
AAATTCG	20	7.0223934E-4	45.000004	30
AATTCGT	20	7.0223934E-4	45.000004	31
TCACTAC	40	6.7775545E-9	45.000004	30
TCGTACA	20	7.0223934E-4	45.000004	34
CAATGAA	20	7.0223934E-4	45.000004	27
TCATATG	20	7.0223934E-4	45.000004	44