##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934059.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 244722 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.966758199099385 31.0 30.0 31.0 26.0 34.0 2 30.128243476271034 31.0 30.0 33.0 26.0 34.0 3 30.213483054241138 31.0 30.0 34.0 25.0 34.0 4 33.969639018968465 35.0 33.0 37.0 28.0 37.0 5 34.40601989195904 35.0 35.0 37.0 32.0 37.0 6 33.8408398100702 35.0 35.0 37.0 30.0 37.0 7 34.3902509786615 35.0 35.0 37.0 32.0 37.0 8 34.48201632873219 35.0 35.0 37.0 32.0 37.0 9 35.88422373141769 37.0 35.0 39.0 31.0 39.0 10 35.25396572437296 37.0 34.0 39.0 30.0 39.0 11 35.38533928294146 37.0 35.0 39.0 30.0 39.0 12 35.31635488431772 37.0 34.0 39.0 30.0 39.0 13 35.18494046305604 37.0 34.0 39.0 29.0 39.0 14 35.86744142332933 38.0 34.0 40.0 27.0 41.0 15 36.12898717728688 38.0 34.0 40.0 30.0 41.0 16 36.35330701775893 38.0 35.0 40.0 31.0 41.0 17 36.130016917154975 38.0 34.0 40.0 30.0 41.0 18 36.25884472993846 38.0 35.0 40.0 30.0 41.0 19 36.181397667557476 38.0 34.0 40.0 30.0 41.0 20 36.22373959022891 38.0 34.0 40.0 30.0 41.0 21 35.91744918724103 38.0 34.0 40.0 29.0 41.0 22 36.1601694984513 38.0 34.0 40.0 30.0 41.0 23 36.25567787121714 38.0 34.0 40.0 30.0 41.0 24 36.14077606426884 38.0 34.0 40.0 30.0 41.0 25 35.66389208979985 38.0 34.0 40.0 29.0 41.0 26 35.73546718317111 38.0 34.0 40.0 29.0 41.0 27 35.72534549407082 38.0 34.0 40.0 29.0 41.0 28 35.67347439135018 38.0 34.0 40.0 29.0 41.0 29 35.83489020194343 38.0 34.0 40.0 30.0 41.0 30 35.37490703737302 37.0 34.0 40.0 28.0 41.0 31 35.459231291015925 37.0 34.0 40.0 29.0 41.0 32 35.43649120226216 38.0 34.0 40.0 29.0 41.0 33 35.42824511077876 38.0 34.0 40.0 29.0 41.0 34 35.38969115976496 38.0 34.0 40.0 28.0 41.0 35 35.41815611183302 38.0 34.0 40.0 28.0 41.0 36 35.20041107869338 37.0 34.0 40.0 27.0 41.0 37 35.25021044286987 37.0 34.0 40.0 28.0 41.0 38 35.12959603141524 37.0 34.0 40.0 27.0 41.0 39 35.11200872827126 37.0 34.0 40.0 27.0 41.0 40 35.02088492248347 37.0 33.0 40.0 27.0 41.0 41 34.87706867384215 37.0 33.0 40.0 27.0 41.0 42 35.11099533348044 37.0 34.0 40.0 28.0 41.0 43 35.03237142553591 37.0 33.0 40.0 27.0 41.0 44 34.960878057551014 37.0 33.0 40.0 27.0 41.0 45 35.02566994385466 37.0 34.0 40.0 27.0 41.0 46 34.92510685594266 37.0 33.0 40.0 27.0 41.0 47 34.836794403445545 36.0 33.0 40.0 27.0 41.0 48 34.83676988582963 36.0 33.0 40.0 27.0 41.0 49 34.86724936867139 36.0 33.0 40.0 27.0 41.0 50 34.64938174745221 36.0 33.0 40.0 27.0 41.0 51 33.58303299253847 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 4.0 13 2.0 14 5.0 15 9.0 16 20.0 17 42.0 18 105.0 19 188.0 20 384.0 21 612.0 22 948.0 23 1362.0 24 1772.0 25 2299.0 26 2959.0 27 3807.0 28 4912.0 29 6113.0 30 7972.0 31 10468.0 32 13402.0 33 17482.0 34 24514.0 35 25129.0 36 28680.0 37 35415.0 38 38942.0 39 17172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.077116074566245 4.534124435073267 53.49294301288809 17.895816477472398 2 19.69295772345764 6.685953857846863 52.430512990250165 21.19057542844534 3 21.623719976136186 6.2912202417436935 49.5529621366285 22.532097645491618 4 20.122016001830648 5.402865292045668 46.83886205572037 27.63625665040331 5 18.993797043175523 5.777576188491431 49.66043101968764 25.5681957486454 6 21.10108613038468 8.55133580144 51.793872230530965 18.553705837644348 7 81.50881408291858 2.2212960011768454 11.415401966312794 4.854487949591782 8 82.8062045913322 4.459345706556828 6.932355897712507 5.80209380439846 9 78.03262477423361 4.743750051078367 9.217806327179412 8.005818847508602 10 43.367576270216816 25.110533585047524 16.089685438987914 15.432204705747745 11 32.1446375887742 23.974142087756718 22.780951446947967 21.100268876521113 12 26.970194751595688 20.974820408463483 29.033352130172197 23.021632709768635 13 23.83602618481379 25.376141090707005 30.628631671856226 20.159201052622976 14 20.440745008622027 28.247153913420124 29.359436421735687 21.95266465622216 15 16.81050334665457 24.143722264447003 37.420419905035104 21.625354483863322 16 19.630029175962928 23.445378838028457 32.97251575256822 23.952076233440394 17 21.151755869925875 24.284698555912424 28.48293165305939 26.080613921102312 18 23.36365345167169 22.06258530087201 30.28947131847566 24.28428992898064 19 23.979045610938126 25.074165788118762 27.49568898586968 23.45109961507343 20 26.600796005263117 24.646333390541102 29.215599741747777 19.537270862448004 21 24.59974992031775 26.955075555119684 27.667720924150668 20.777453600411896 22 23.001201363179444 23.24147399906833 28.651694575886104 25.10563006186612 23 22.73436797672461 25.561249090805077 26.413644870506126 25.290738061964184 24 23.24678614918152 24.371736092382378 28.926291874044836 23.45518588439127 25 20.32959848317683 26.962430839891795 27.421727511216808 25.286243165714566 26 19.058360098397365 29.438710046501743 27.029854283636123 24.473075571464765 27 20.150619887055516 29.6822516978449 28.232034716944128 21.93509369815546 28 17.011956424023992 28.47394186056015 31.03562409591291 23.478477619502947 29 19.545034774151894 26.960796332164662 28.487426549309014 25.006742344374434 30 20.288735789998448 30.130106815079966 26.468809506296942 23.112347888624644 31 23.26394848031644 28.15357834604163 23.55897712506436 25.02349604857757 32 23.260679464862168 29.427268492411795 24.0301239774111 23.28192806531493 33 23.07148519544626 28.35339691568392 23.90263237469455 24.672485514175268 34 19.43184511404778 27.659957012446778 26.575869762424304 26.332328111081143 35 20.042742377064588 28.42327212101895 25.4243590686575 26.109626433258963 36 22.4164562237968 30.388767662899124 25.828082477259912 21.366693636044165 37 19.580585317217086 29.502047220928233 27.269718292593225 23.64764916926145 38 20.23234527341228 30.381412378127017 23.998251076731965 25.387991271728737 39 20.924967922785857 27.45400903882773 25.94740154134079 25.67362149704563 40 21.232255375487288 26.523156888224186 25.991941876905223 26.2526458593833 41 19.261856310425706 25.696913232157303 25.91798040225235 29.123250055164636 42 22.359657080278847 25.660136808296762 24.330056145340425 27.650149966083966 43 22.45527578231626 28.013010681508 24.80120299768717 24.73051053848857 44 19.83311676105949 26.45369030982094 27.451557277237026 26.261635651882543 45 20.508985706229925 27.44501924632849 24.814687686436038 27.23130736100555 46 21.781449971804744 27.908810813903123 26.579956031742142 23.729783182549998 47 17.515793430913444 28.775508536216606 28.99248943699381 24.71620859587614 48 20.69205057166908 26.570148985379326 26.901954053987794 25.8358463889638 49 20.83670450552055 24.20297316955566 29.66427211284641 25.296050212077375 50 20.891869141311364 25.26744632685251 26.976324155572446 26.86436037626368 51 19.62267389119082 25.41822966468074 25.268672207647864 29.690424236480577 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 47.0 1 139.0 2 231.0 3 385.5 4 540.0 5 424.5 6 309.0 7 326.5 8 344.0 9 461.0 10 578.0 11 645.5 12 713.0 13 732.5 14 752.0 15 748.0 16 744.0 17 737.5 18 731.0 19 801.5 20 872.0 21 822.0 22 772.0 23 977.0 24 1182.0 25 1392.5 26 1887.0 27 2171.0 28 2464.5 29 2758.0 30 2760.5 31 2763.0 32 3614.5 33 4466.0 34 5137.5 35 5809.0 36 6352.0 37 6895.0 38 7527.5 39 8160.0 40 9604.5 41 11049.0 42 12513.5 43 13978.0 44 15547.0 45 17116.0 46 20405.0 47 23694.0 48 24448.0 49 25202.0 50 24777.0 51 24352.0 52 21203.5 53 18055.0 54 16757.0 55 15459.0 56 14394.5 57 13330.0 58 11958.5 59 10587.0 60 9829.5 61 9072.0 62 7741.5 63 6411.0 64 5613.0 65 4815.0 66 4082.0 67 3349.0 68 2723.5 69 2098.0 70 1768.0 71 1438.0 72 1234.0 73 1030.0 74 835.0 75 441.0 76 242.0 77 228.0 78 214.0 79 162.0 80 110.0 81 70.5 82 31.0 83 18.5 84 6.0 85 3.5 86 1.0 87 1.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 244722.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.97052165314111 #Duplication Level Percentage of deduplicated Percentage of total 1 75.00856590218292 27.73105809857716 2 9.729759602100026 7.194285760985935 3 3.279358938933407 3.6371883198077817 4 1.716496269687759 2.53839050024109 5 1.1229621442387399 2.075824813461806 6 0.8886432716219951 1.9712163189251477 7 0.7372202265819288 1.9078791444986556 8 0.63111356728378 1.8666078243884898 9 0.6067974578612877 2.0190256699438547 >10 6.140922906880354 40.9436013108752 >50 0.08400110527770102 2.127311806866567 >100 0.04531638574191766 2.859162641691389 >500 0.004421110804089527 1.2311929454646497 >1k 0.004421110804089527 1.8972548442722763 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGC 1309 0.5348926537050204 No Hit CCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 1180 0.4821797795049076 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCG 1136 0.46420019450641953 No Hit CTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGCT 1018 0.4159822165559287 No Hit GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 977 0.3992285123527921 No Hit TCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 900 0.367764238605438 No Hit GAATCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTC 634 0.2590694747509419 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAACACCGT 502 0.20513071975547764 No Hit GGCTTTGGGACAGATTACTCATAGACATATAAATAAATAAATATTTTTAAA 326 0.13321237976152533 No Hit TTTATTGGGCCACCAAAAATAAAAAAATGGACCTCTCCTGTCTTGTAGTGT 305 0.12463121419406509 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 290 0.11850181021730781 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 277 0.11318966010411816 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46501744836998715 0.0 2 0.0 0.0 0.0 1.9123740407482777 0.0 3 0.0 0.0 0.0 2.39823146263924 0.0 4 0.0 0.0 0.0 3.2113990568890416 0.0 5 0.0 0.0 0.0 4.600321998022245 0.0 6 0.0 0.0 0.0 5.182206748882406 0.0 7 0.0 0.0 0.0 5.851129036212519 0.0 8 0.0 0.0 0.0 6.708428339094973 0.0 9 0.0 0.0 0.0 7.0569871119065715 0.0 10 0.0 0.0 0.0 8.279190264871977 0.0 11 0.0 0.0 0.0 9.816036155310924 0.0 12 0.0 0.0 0.0 11.810135582415965 0.0 13 0.0 0.0 0.0 12.29190673498909 0.0 14 0.0 0.0 0.0 12.479466496677864 0.0 15 0.0 0.0 0.0 12.852951512328275 0.0 16 0.0 0.0 0.0 13.50512009545525 0.0 17 0.0 0.0 0.0 14.46457613128366 0.0 18 0.0 0.0 0.0 15.558061800737162 0.0 19 0.0 0.0 0.0 16.484419055091085 0.0 20 0.0 0.0 0.0 17.191752274008877 0.0 21 0.0 0.0 0.0 18.12709932086204 0.0 22 0.0 0.0 0.0 19.0170887782872 0.0 23 0.0 0.0 0.0 19.943037405709337 0.0 24 0.0 0.0 0.0 20.638111816673614 0.0 25 0.0 0.0 0.0 21.228577733101233 0.0 26 0.0 0.0 0.0 21.799020929871446 0.0 27 0.0 0.0 0.0 22.33636534516717 0.0 28 0.0 0.0 0.0 22.90558266114203 0.0 29 0.0 0.0 0.0 23.493596815978947 0.0 30 0.0 0.0 0.0 24.235663324098365 0.0 31 0.0 0.0 0.0 24.88578877256642 0.0 32 0.0 0.0 0.0 25.49300839319718 0.0 33 0.0 0.0 0.0 26.047923766559606 0.0 34 0.0 0.0 0.0 26.644519086963985 0.0 35 0.0 0.0 0.0 27.305677462590204 0.0 36 0.0 0.0 0.0 27.921886875720205 0.0 37 0.0 0.0 0.0 28.517664942261014 0.0 38 0.0 0.0 0.0 29.145724536412747 0.0 39 0.0 0.0 0.0 29.822410735446752 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTCA 35 1.2066994E-7 45.000004 16 CAAACTA 20 7.0223934E-4 45.000004 36 GCGCGAC 70 0.0 45.000004 9 TTTCGTC 35 1.2066994E-7 45.000004 16 GACAATC 20 7.0223934E-4 45.000004 13 CGCGCAT 20 7.0223934E-4 45.000004 36 ATTCGTA 20 7.0223934E-4 45.000004 32 CGTTCAA 20 7.0223934E-4 45.000004 9 TCCTAAC 20 7.0223934E-4 45.000004 26 GCCGATC 20 7.0223934E-4 45.000004 9 TACGCGC 20 7.0223934E-4 45.000004 34 TCTACGG 20 7.0223934E-4 45.000004 2 CTTGCAT 20 7.0223934E-4 45.000004 38 TCGTCCC 20 7.0223934E-4 45.000004 38 AAATTCG 20 7.0223934E-4 45.000004 30 AATTCGT 20 7.0223934E-4 45.000004 31 TCACTAC 40 6.7775545E-9 45.000004 30 TCGTACA 20 7.0223934E-4 45.000004 34 CAATGAA 20 7.0223934E-4 45.000004 27 TCATATG 20 7.0223934E-4 45.000004 44 >>END_MODULE