##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934058.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 133235 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.753217998273726 31.0 30.0 31.0 25.0 33.0 2 29.69045671182497 31.0 30.0 33.0 25.0 34.0 3 29.761316470897288 31.0 30.0 33.0 25.0 34.0 4 33.7636657034563 35.0 33.0 37.0 28.0 37.0 5 34.29497504409502 35.0 35.0 37.0 32.0 37.0 6 33.541599429579314 35.0 33.0 37.0 28.0 37.0 7 34.24398243704732 35.0 35.0 37.0 31.0 37.0 8 34.00266446504297 35.0 35.0 37.0 30.0 37.0 9 35.59866401471085 37.0 35.0 39.0 30.0 39.0 10 35.124779524899616 37.0 34.0 39.0 30.0 39.0 11 35.29686643899876 37.0 34.0 39.0 30.0 39.0 12 35.192682103051 37.0 34.0 39.0 30.0 39.0 13 34.90437197433107 37.0 33.0 39.0 27.0 39.0 14 35.52857732577776 38.0 34.0 40.0 27.0 41.0 15 35.85503058505648 38.0 34.0 40.0 29.0 41.0 16 36.15234735617518 38.0 34.0 40.0 30.0 41.0 17 35.92523736255488 38.0 34.0 40.0 30.0 41.0 18 36.077337036064094 38.0 34.0 40.0 30.0 41.0 19 36.024370473224 38.0 34.0 40.0 30.0 41.0 20 35.940646226592115 38.0 34.0 40.0 29.0 41.0 21 35.70094945021954 38.0 34.0 40.0 29.0 41.0 22 35.90107704432019 38.0 34.0 40.0 30.0 41.0 23 35.939452846474275 38.0 34.0 40.0 30.0 41.0 24 35.83857094607273 38.0 34.0 40.0 29.0 41.0 25 35.43989192029122 37.0 34.0 40.0 28.0 41.0 26 35.5153450669869 37.0 34.0 40.0 29.0 41.0 27 35.43400007505535 37.0 34.0 40.0 28.0 41.0 28 35.278688032423915 37.0 34.0 40.0 27.0 41.0 29 35.46607122753031 37.0 34.0 40.0 29.0 41.0 30 35.03748264344954 37.0 34.0 40.0 27.0 41.0 31 35.20431568281608 37.0 34.0 40.0 27.0 41.0 32 35.14427140015761 37.0 34.0 40.0 27.0 41.0 33 35.145795023830075 37.0 34.0 40.0 27.0 41.0 34 35.159132360115585 37.0 34.0 40.0 27.0 41.0 35 35.19590197770856 37.0 34.0 40.0 27.0 41.0 36 34.96217210192517 37.0 33.0 40.0 27.0 41.0 37 34.960655983788044 37.0 33.0 40.0 27.0 41.0 38 34.7833902503096 37.0 33.0 40.0 26.0 41.0 39 34.78795361579164 37.0 33.0 40.0 26.0 41.0 40 34.68975869703907 37.0 33.0 40.0 26.0 41.0 41 34.659211168236574 37.0 33.0 40.0 26.0 41.0 42 34.86446504296919 37.0 33.0 40.0 27.0 41.0 43 34.77430104702218 37.0 33.0 40.0 26.0 41.0 44 34.80833864975419 37.0 33.0 40.0 26.0 41.0 45 34.85575862198371 37.0 33.0 40.0 27.0 41.0 46 34.71588546553083 37.0 33.0 40.0 26.0 41.0 47 34.57704056741847 36.0 33.0 40.0 26.0 41.0 48 34.57694299545915 36.0 33.0 40.0 26.0 41.0 49 34.663144068750704 36.0 33.0 40.0 26.0 41.0 50 34.42217885690697 36.0 33.0 40.0 26.0 41.0 51 33.32901264682703 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 10.0 11 3.0 12 4.0 13 6.0 14 6.0 15 13.0 16 12.0 17 32.0 18 71.0 19 137.0 20 258.0 21 481.0 22 711.0 23 947.0 24 1215.0 25 1542.0 26 1815.0 27 2231.0 28 2893.0 29 3657.0 30 4689.0 31 5943.0 32 7406.0 33 9824.0 34 13824.0 35 13282.0 36 15247.0 37 18060.0 38 20028.0 39 8883.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.757458625736483 4.696964010958082 50.39366532817954 16.151912035125907 2 20.9126730964086 10.374901489848764 49.54704094269523 19.165384471047396 3 19.849138739820617 10.048410702893385 48.45198333771156 21.650467219574438 4 19.592449431455698 4.847074717604233 49.799977483394 25.760498367546063 5 22.283183848087965 6.569595076368823 47.008668893308815 24.1385521822344 6 20.08856531692123 11.475963523098285 50.7734454159943 17.66202574398619 7 78.51540511126956 2.7019927196307276 13.859721544639173 4.922880624460539 8 78.65050474725109 7.79599954966788 7.512290314106654 6.041205388974369 9 72.82921154351334 5.196832664089766 10.199271963072766 11.774683829324127 10 42.39576687807258 26.398468870792207 16.25623897624498 14.949525274890233 11 33.910008631365635 24.621908657635004 23.088527789244566 18.379554921754796 12 28.14425638908695 19.697526926108004 29.989116973768155 22.169099711036893 13 24.687957368559314 26.193567756220215 31.335610012384134 17.78286486283634 14 19.740308477502158 31.297331782189364 28.65838555935002 20.303974180958456 15 16.79288475250497 23.831575787143016 37.914962284684954 21.460577175667055 16 17.636506923856345 22.291439936953502 33.37261230157241 26.699440837617743 17 17.857169662626188 24.036476901715016 29.839006267122002 28.267347168536794 18 20.847374939017527 20.875145419747064 32.36837167410966 25.909107967125756 19 22.69373663076519 24.332945547341165 27.859046046459262 25.114271775434382 20 26.713701354749126 24.540848876046084 29.99362029496754 18.75182947423725 21 23.595151424175327 28.689908807745713 28.01290952077157 19.70203024730739 22 20.659736555709838 22.77329530528765 31.04814800915675 25.51882012984576 23 20.430817728074455 27.0717153901002 27.067212068900815 25.43025481292453 24 21.30596314782152 25.027958119112846 29.827747964123542 23.838330768942097 25 19.50238300746801 27.975381844110032 27.585094006830037 24.937141141591923 26 18.260216909971103 27.973880737043572 27.236086613877735 26.529815739107594 27 21.233159455098136 27.329905805531578 28.533043119300483 22.903891620069803 28 16.87844785529328 27.926595864450032 32.60929935827673 22.58565692197996 29 18.745825045971404 24.09126730964086 32.01335985289151 25.14954779149623 30 18.667016924982175 29.366908094719857 30.608323638683526 21.35775134161444 31 23.631928547303637 27.21131834728112 24.404998686531318 24.751754418883927 32 23.89237062333471 28.07295380343003 25.96014560738545 22.074529965849816 33 21.369009644612902 26.698690284084513 24.62716253236762 27.305137538934964 34 19.65399482118062 26.54632791683867 26.82478327766728 26.974893984313432 35 20.610950576049834 24.281907907081475 26.969640109580816 28.137501407287875 36 22.186362442301196 26.149285097759602 25.44226366945622 26.222088790482985 37 18.90043907381694 25.660674747626373 31.589297106616133 23.849589071940557 38 19.302735767628626 30.967088227567828 24.668442976695314 25.06173302810823 39 19.5339062558637 25.79652493714114 29.22280181633955 25.446766990655608 40 22.0009757195932 25.036214207978386 26.82553383120051 26.13727624122791 41 18.61522873118925 23.28817502908395 25.788268848275603 32.3083273914512 42 22.440800090066425 23.08102225391226 27.510789207040194 26.967388448981122 43 20.201148346905843 23.924644425263633 27.02142830337374 28.852778924456786 44 19.01752542500094 24.87184298420085 29.871280069050925 26.239351521747288 45 19.590948324389238 25.04747251097685 27.324651930798964 28.036927233834952 46 23.435283521597178 25.808533793672833 27.67591098435096 23.08027170037903 47 17.388073704356962 26.465268135249747 31.05265133035614 25.094006830037152 48 20.272450932562766 24.596389837505157 28.92333095658048 26.207828273351595 49 20.686756482906144 21.57616241978459 32.33009344391489 25.40698765339438 50 20.722032498967987 23.143318197170412 28.819004015461402 27.315645288400198 51 19.12785679438586 24.106278380305476 26.506548579577437 30.259316245731227 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 71.5 2 110.0 3 175.0 4 240.0 5 192.5 6 145.0 7 158.5 8 172.0 9 233.5 10 295.0 11 316.5 12 338.0 13 352.0 14 366.0 15 341.0 16 316.0 17 398.0 18 480.0 19 395.0 20 310.0 21 372.5 22 435.0 23 724.0 24 1013.0 25 1052.0 26 1077.5 27 1064.0 28 1269.5 29 1475.0 30 1568.5 31 1662.0 32 1747.5 33 1833.0 34 2355.0 35 2877.0 36 3093.5 37 3310.0 38 3638.5 39 3967.0 40 4869.5 41 5772.0 42 7162.5 43 8553.0 44 9236.5 45 9920.0 46 13854.5 47 17789.0 48 16648.5 49 15508.0 50 14325.0 51 13142.0 52 11290.0 53 9438.0 54 8148.0 55 6858.0 56 6344.0 57 5830.0 58 5172.0 59 4514.0 60 4288.0 61 4062.0 62 3630.0 63 3198.0 64 2857.5 65 2517.0 66 2075.5 67 1634.0 68 1300.5 69 967.0 70 842.5 71 718.0 72 629.5 73 541.0 74 455.0 75 281.5 76 194.0 77 156.5 78 119.0 79 81.0 80 43.0 81 29.5 82 16.0 83 8.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 133235.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.38428340901415 #Duplication Level Percentage of deduplicated Percentage of total 1 76.22941679366613 30.784703718992755 2 9.238746608184961 7.462003227380193 3 3.1929524588335876 3.8683529102713248 4 1.7098464855220608 2.7620370022891882 5 1.124409917109616 2.270424438023042 6 0.9943129019068506 2.4092768416707324 7 0.810318551834368 2.2906893834202724 8 0.7136750548265992 2.3057004540848873 9 0.6653533063227149 2.4182834840695016 >10 5.202022079322009 34.52321086801516 >50 0.07619968033304836 2.0309978609224304 >100 0.03159498940638591 2.8491012121439563 >500 0.007434115154443742 2.0017262731264305 >1k 0.003717057577221871 2.0234923255901225 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGC 1487 1.1160731039141367 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCG 1209 0.907419221675986 No Hit GAATCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTC 916 0.687507036439374 No Hit GCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 674 0.5058730813975306 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTATACGCT 555 0.4165572109430705 No Hit CCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 522 0.3917889443464555 TruSeq Adapter, Index 13 (95% over 22bp) TGCTTTGGGAATGTGTATTTTTAAACAAATTTATGGCAATTAAAATATTTG 491 0.368521784816302 No Hit CTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGCT 424 0.31823469808984123 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 405 0.30397418095845685 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTATACGCTCGTA 309 0.23192104176830414 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTC 269 0.20189890043907383 No Hit GAACTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCT 244 0.18313506210830488 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCT 241 0.1808834015086126 No Hit TTCTATGGTACTAAAATTTTGTTTTATTTTATCAAGCATTAAAGTTTTTTA 239 0.1793822944421511 No Hit TGGCTGGGGTAATGCTTTAAAAATAATTACTGATTCTTTTTTAGAGGTAAA 194 0.145607385446767 No Hit TTTCTTGGGCTTCAGTGTCCGGGTCATTGACAAAGATGGCATCCACAATCT 171 0.12834465418245955 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTT 141 0.10582804818553683 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3505085000187638 0.0 2 0.0 0.0 0.0 1.7247720193642813 0.0 3 0.0 0.0 0.0 2.193867977633505 0.0 4 0.0 0.0 0.0 3.1703381243667206 0.0 5 0.0 0.0 0.0 5.006192066649154 0.0 6 0.0 0.0 0.0 5.727474012083912 0.0 7 0.0 0.0 0.0 6.546327916838669 0.0 8 0.0 0.0 0.0 7.728449731677112 0.0 9 0.0 0.0 0.0 8.169775209216798 0.0 10 0.0 0.0 0.0 10.058918452358615 0.0 11 0.0 0.0 0.0 11.61931924794536 0.0 12 0.0 0.0 0.0 14.564491312342852 0.0 13 0.0 0.0 0.0 15.262506098247458 0.0 14 0.0 0.0 0.0 15.58299245693699 0.0 15 0.0 0.0 0.0 16.188689158254213 0.0 16 0.0 0.0 0.0 16.987278117611737 0.0 17 0.0 0.0 0.0 18.075580740796337 0.0 18 0.0 0.0 0.0 19.440087064209855 0.0 19 0.0 0.0 0.0 20.689758697039068 0.0 20 0.0 0.0 0.0 21.504859834127668 0.0 21 0.0 0.0 0.0 22.484332194993808 0.0 22 0.0 0.0 0.0 23.394003077269485 0.0 23 0.0 0.0 0.0 24.30592562014486 0.0 24 0.0 0.0 0.0 25.019702030247306 0.0 25 0.0 0.0 0.0 25.62765039216422 0.0 26 0.0 0.0 0.0 26.157541186625135 0.0 27 0.0 0.0 0.0 26.703944158817126 0.0 28 0.0 0.0 0.0 27.26310654107404 0.0 29 0.0 0.0 0.0 27.866551581791573 0.0 30 0.0 0.0 0.0 28.58858408075956 0.0 31 0.0 0.0 0.0 29.18302247907832 0.0 32 0.0 0.0 0.0 29.778211430930313 0.0 33 0.0 0.0 0.0 30.378654257514917 0.0 34 0.0 0.0 0.0 30.980598191165985 0.0 35 0.0 0.0 0.0 31.666604120538896 0.0 36 0.0 0.0 0.0 32.22126318159643 0.0 37 0.0 0.0 0.0 32.773670582054265 0.0 38 0.0 0.0 0.0 33.32908019664502 0.0 39 0.0 0.0 0.0 33.98131121702255 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATGAA 170 0.0 45.000004 19 TGATCCG 20 7.0108235E-4 45.0 4 AAACTTG 20 7.0108235E-4 45.0 19 CTGTCCG 20 7.0108235E-4 45.0 1 CTCGTGT 20 7.0108235E-4 45.0 16 GGTCGGC 25 3.8721977E-5 45.0 2 TTTACGG 25 3.8721977E-5 45.0 2 ACCATTA 20 7.0108235E-4 45.0 5 GTCCTTG 20 7.0108235E-4 45.0 1 TATGGTA 35 1.2011515E-7 45.0 4 TATGGCA 50 2.1827873E-11 45.0 32 GACCGAT 25 3.8721977E-5 45.0 9 TCGGGCT 20 7.0108235E-4 45.0 5 GGATCGT 25 3.8721977E-5 45.0 9 GATTTGA 20 7.0108235E-4 45.0 9 CAATTAA 50 2.1827873E-11 45.0 37 TACGGGA 25 3.8721977E-5 45.0 4 CGTTCAT 20 7.0108235E-4 45.0 17 TCGTGTA 20 7.0108235E-4 45.0 17 CTTGCGG 20 7.0108235E-4 45.0 2 >>END_MODULE