##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934055.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 211055 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.979261329985075 31.0 30.0 31.0 26.0 34.0 2 30.271189974177346 31.0 30.0 33.0 26.0 34.0 3 30.366852242306507 31.0 30.0 34.0 26.0 34.0 4 34.04067660088602 35.0 33.0 37.0 30.0 37.0 5 34.39856909336429 35.0 35.0 37.0 32.0 37.0 6 33.97174670109687 35.0 35.0 37.0 30.0 37.0 7 34.467333159602944 35.0 35.0 37.0 32.0 37.0 8 34.58438795574613 35.0 35.0 37.0 32.0 37.0 9 35.93019828954538 37.0 35.0 39.0 31.0 39.0 10 35.20335931392291 37.0 34.0 39.0 30.0 39.0 11 35.374561133353865 37.0 35.0 39.0 30.0 39.0 12 35.343289663831705 37.0 34.0 39.0 30.0 39.0 13 35.22902087133686 37.0 34.0 39.0 30.0 39.0 14 35.83482978370567 38.0 34.0 40.0 27.0 41.0 15 36.21827011916325 38.0 34.0 40.0 30.0 41.0 16 36.40693658051219 38.0 35.0 40.0 31.0 41.0 17 36.21478761460283 38.0 34.0 40.0 30.0 41.0 18 36.33972187344531 38.0 35.0 40.0 30.0 41.0 19 36.349738219895286 38.0 35.0 40.0 30.0 41.0 20 36.35983037596835 38.0 34.0 40.0 30.0 41.0 21 36.04078557721921 38.0 34.0 40.0 30.0 41.0 22 36.22980265807491 38.0 34.0 40.0 30.0 41.0 23 36.326066665087296 38.0 35.0 40.0 30.0 41.0 24 36.177882542465234 38.0 34.0 40.0 30.0 41.0 25 35.671270521901874 38.0 34.0 40.0 29.0 41.0 26 35.8280732510483 38.0 34.0 40.0 29.0 41.0 27 35.83956788514842 38.0 34.0 40.0 29.0 41.0 28 35.73729596550662 38.0 34.0 40.0 29.0 41.0 29 35.89316528866883 38.0 34.0 40.0 30.0 41.0 30 35.422311719693916 38.0 34.0 40.0 28.0 41.0 31 35.57845585273981 38.0 34.0 40.0 29.0 41.0 32 35.65323256970932 38.0 34.0 40.0 29.0 41.0 33 35.5979720925825 38.0 34.0 40.0 29.0 41.0 34 35.61152306270877 38.0 34.0 40.0 29.0 41.0 35 35.674715121650756 38.0 34.0 40.0 29.0 41.0 36 35.473118381464545 38.0 34.0 40.0 28.0 41.0 37 35.54580559569781 38.0 34.0 40.0 29.0 41.0 38 35.400488024448606 38.0 34.0 40.0 28.0 41.0 39 35.34915543341783 38.0 34.0 40.0 28.0 41.0 40 35.26917154296274 37.0 34.0 40.0 27.0 41.0 41 35.18824477032053 37.0 34.0 40.0 27.0 41.0 42 35.420648646087514 37.0 34.0 40.0 28.0 41.0 43 35.33209353012248 37.0 34.0 40.0 28.0 41.0 44 35.24104143469712 37.0 34.0 40.0 28.0 41.0 45 35.324957949349695 37.0 34.0 40.0 28.0 41.0 46 35.18747245978536 37.0 34.0 40.0 28.0 41.0 47 35.14390561701926 37.0 33.0 40.0 28.0 41.0 48 35.144028807656774 37.0 34.0 40.0 28.0 41.0 49 35.141877709601765 37.0 34.0 40.0 28.0 41.0 50 34.94547866669826 37.0 33.0 40.0 27.0 41.0 51 33.72085475350027 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 6.0 12 4.0 13 7.0 14 10.0 15 14.0 16 16.0 17 38.0 18 69.0 19 120.0 20 214.0 21 394.0 22 639.0 23 944.0 24 1411.0 25 1843.0 26 2595.0 27 3138.0 28 4163.0 29 5333.0 30 6823.0 31 8761.0 32 11066.0 33 14553.0 34 20181.0 35 21026.0 36 24448.0 37 31286.0 38 35857.0 39 16091.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.380635379403472 4.785956267323684 55.397408258510815 16.43600009476203 2 18.50133851365758 4.930942171471892 55.14439364146786 21.42332567340267 3 20.421217218260644 4.443865343156997 52.905166899623325 22.22975053895904 4 19.861647437871646 4.447182014166923 49.51647674776717 26.17469380019426 5 18.069223662078603 5.7620051645305725 52.12290635142498 24.045864821965836 6 20.511714955817204 6.620549145957215 53.827201440382844 19.040534457842742 7 82.44533415460425 2.0932932174077847 10.773495060529246 4.687877567458719 8 83.65970955438155 3.3365710359858802 7.27488095520125 5.728838454431309 9 79.16988462722986 4.878349245457345 9.474781455070953 6.476984672241833 10 40.57804837601573 25.340314136125652 17.648480253962237 16.433157233896377 11 29.297576461112033 27.497097912866312 24.61822747625027 18.587098149771386 12 26.249555802989743 22.47186752268366 30.904740470493476 20.37383620383312 13 22.23164577953614 27.28293572765393 31.900215583615644 18.585202909194287 14 18.105707043187795 30.093103693350077 31.991187131316483 19.810002132145648 15 15.320651015138234 26.25666295515387 39.32955864585061 19.09312738385729 16 17.584989694629364 23.42706877354244 34.97856009097155 24.009381440856647 17 18.014261685342685 24.29508895785459 30.69389495629101 26.996754400511712 18 20.194735969297103 23.011063466868826 33.897325341735566 22.896875222098505 19 22.392741228589706 24.97642794532231 30.741749780862808 21.88908104522518 20 23.610907109521214 26.55326810547014 31.127905048447087 18.70791973656156 21 23.309563857762193 26.238658169671414 30.2129776598517 20.238800312714694 22 20.090971547700835 25.02665182061548 30.67399493023146 24.20838170145223 23 20.57615313543863 25.826443344152 29.052142806377486 24.545260714031887 24 20.6874985193433 25.49951434460212 30.778233161971997 23.034753974082587 25 18.377674066001752 27.603231385183957 29.40607898415105 24.61301556466324 26 19.4290587761484 28.452299163725097 27.887043661604793 24.23159839852171 27 17.963090189760962 28.75222098505129 29.498945772428986 23.78574305275876 28 16.54687166852242 27.76716969510317 32.40814005827865 23.277818578095758 29 18.835374665371585 25.42228329108526 30.735116438842958 25.007225604700196 30 19.13245362583213 28.2097083698562 29.276728814763924 23.381109189547747 31 20.80547724526782 29.530691052095428 25.123782900191895 24.54004880244486 32 21.845964322096137 28.86640922982161 26.240079600104238 23.047546847978015 33 20.189524057710077 29.588022079552722 25.921679183151312 24.300774679585892 34 18.85574850157542 28.300206107412762 27.05740209897894 25.786643292032885 35 18.818791310321952 27.177749875624833 27.758641112506215 26.244817701546992 36 21.967259719030586 27.91926275141551 26.89062092819407 23.222856601359833 37 18.08533320698396 28.796285328468883 28.643244651867995 24.47513681267916 38 17.618630214872898 29.999289284783586 26.59259434744498 25.789486152898533 39 18.82400322190898 28.348060931984552 27.969960436852954 24.857975409253513 40 20.500817322498875 26.666034919807636 28.248086991542486 24.585060766151003 41 17.83042334936391 26.379379782521145 28.236715548079882 27.55348132003506 42 20.21368837506811 25.91694108170856 28.20260121769207 25.66676932553126 43 21.11392764919097 26.889199497761247 27.014285375849894 24.98258747719789 44 19.005946317310656 26.52578711710218 27.643505247447347 26.82476131813982 45 19.76167349742958 27.378171566653243 24.810594394825994 28.049560541091186 46 21.16509914477269 26.21544147260193 28.362749046457086 24.256710336168297 47 16.933026936106703 27.698467224183272 30.336168297363248 25.032337542346784 48 17.974935443367844 26.905782852810876 29.576176825945844 25.543104877875432 49 19.774466371325012 24.31735803463552 31.25962426855559 24.64855132548388 50 19.349458671910167 25.200540143564474 28.28362275236313 27.16637843216223 51 18.173461893819145 25.476297647532636 26.7773803037123 29.572860154935913 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 58.0 1 110.0 2 162.0 3 278.0 4 394.0 5 308.0 6 222.0 7 244.0 8 266.0 9 337.5 10 409.0 11 470.5 12 532.0 13 571.0 14 610.0 15 624.5 16 639.0 17 590.5 18 542.0 19 541.5 20 541.0 21 644.0 22 747.0 23 995.0 24 1243.0 25 1467.5 26 1876.5 27 2061.0 28 2383.5 29 2706.0 30 3323.5 31 3941.0 32 4584.0 33 5227.0 34 6000.5 35 6774.0 36 7442.5 37 8111.0 38 8354.0 39 8597.0 40 9987.0 41 11377.0 42 12847.0 43 14317.0 44 15991.0 45 17665.0 46 19809.0 47 21953.0 48 23301.5 49 24650.0 50 22828.5 51 21007.0 52 17787.5 53 14568.0 54 12649.5 55 10731.0 56 9098.5 57 7466.0 58 7068.5 59 6671.0 60 5637.5 61 4604.0 62 4125.0 63 3646.0 64 3055.5 65 2465.0 66 1991.0 67 1517.0 68 1394.0 69 1271.0 70 1013.0 71 755.0 72 569.0 73 383.0 74 336.5 75 222.0 76 154.0 77 106.0 78 58.0 79 42.5 80 27.0 81 16.5 82 6.0 83 3.0 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 211055.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.69344483665395 #Duplication Level Percentage of deduplicated Percentage of total 1 74.90778871978515 29.733481793845208 2 10.36944195762459 8.231977446637133 3 3.7087436586093703 4.416384354789036 4 1.8669054013727246 2.9641562625855817 5 1.1626380185019398 2.30745540262017 6 0.8928678006565204 2.1264599275070477 7 0.6410026857654432 1.781052332330435 8 0.576544315129812 1.8308023974793302 9 0.5335720680393913 1.9061382104190852 >10 5.205610265592361 37.483120513610196 >50 0.08116980005968367 2.1368837506811023 >100 0.04774694121157863 3.0641302030276467 >500 0.005968367651447329 2.0179574044680297 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 996 0.47191490369808814 TruSeq Adapter, Index 13 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 938 0.4444339153301272 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 888 0.4207434081163678 TruSeq Adapter, Index 13 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGCT 859 0.4070029139323873 Illumina PCR Primer Index 1 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGC 578 0.2738622633910592 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCG 434 0.20563360261543198 No Hit GAATCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTC 340 0.16109544905356424 No Hit TGTTGACGGGGGAAGTGACTGAATCAATTAGAAATGGAATTGTTAGCATAT 230 0.10897633318329344 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCACACTAT 229 0.10850252303901828 No Hit TTCCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCT 229 0.10850252303901828 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 221 0.10471204188481677 No Hit TGGGTTGGGTTTCTTTTCTAGTGTGTAACACGAGGATCTGCAGAATTTCCC 214 0.10139537087489044 No Hit TTCTTTGGGGAATTATTTAATAGTTGTAACCTTGGTCTCTAACTTCTGTGT 213 0.10092156073061523 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.44869820662860394 0.0 2 0.0 0.0 0.0 1.9933192769657198 0.0 3 0.0 0.0 0.0 2.5438866646134892 0.0 4 0.0 0.0 0.0 3.56020942408377 0.0 5 0.0 0.0 0.0 5.113832887162114 0.0 6 0.0 0.0 0.0 5.821705242709246 0.0 7 0.0 0.0 0.0 6.59733244888773 0.0 8 0.0 0.0 0.0 7.7965459240482335 0.0 9 0.0 0.0 0.0 8.306839449432612 0.0 10 0.0 0.0 0.0 9.473833834782402 0.0 11 0.0 0.0 0.0 11.387079197365615 0.0 12 0.0 0.0 0.0 13.489848617658904 0.0 13 0.0 0.0 0.0 14.105327995072374 0.0 14 0.0 0.0 0.0 14.338916396200043 0.0 15 0.0 0.0 0.0 14.702328776859112 0.0 16 0.0 0.0 0.0 15.545237023524674 0.0 17 0.0 0.0 0.0 16.883750681102082 0.0 18 0.0 0.0 0.0 18.417947928265143 0.0 19 0.0 0.0 0.0 19.3774134704224 0.0 20 0.0 0.0 0.0 20.347302835753712 0.0 21 0.0 0.0 0.0 21.534671057307335 0.0 22 0.0 0.0 0.0 22.692189239771622 0.0 23 0.0 0.0 0.0 23.78574305275876 0.0 24 0.0 0.0 0.0 24.605434602354837 0.0 25 0.0 0.0 0.0 25.323256970931748 0.0 26 0.0 0.0 0.0 25.959583994693325 0.0 27 0.0 0.0 0.0 26.588803866290778 0.0 28 0.0 0.0 0.0 27.317050058041744 0.0 29 0.0 0.0 0.0 28.039610528061406 0.0 30 0.0 0.0 0.0 28.801023429911634 0.0 31 0.0 0.0 0.0 29.48378384781218 0.0 32 0.0 0.0 0.0 30.23856340764256 0.0 33 0.0 0.0 0.0 30.913269053090428 0.0 34 0.0 0.0 0.0 31.62114140863756 0.0 35 0.0 0.0 0.0 32.369761436592356 0.0 36 0.0 0.0 0.0 33.10464097036318 0.0 37 0.0 0.0 0.0 33.79213948970647 0.0 38 0.0 0.0 0.0 34.55876430314373 0.0 39 0.0 0.0 0.0 35.2983819383573 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTCG 30 2.1570559E-6 45.000004 1 TAATAGT 60 0.0 45.000004 18 GGGTAAC 35 1.2056262E-7 45.000004 7 TGACCTC 30 2.1570559E-6 45.000004 11 TCGACGT 30 2.1570559E-6 45.000004 26 TTCGACG 30 2.1570559E-6 45.000004 25 GACTAAT 35 1.2056262E-7 45.000004 9 GTTGACG 55 1.8189894E-12 45.0 2 GTGCAAT 20 7.0201897E-4 45.0 21 ATGGGCG 20 7.0201897E-4 45.0 5 CGTGGGT 20 7.0201897E-4 45.0 4 CATATGC 45 3.8198777E-10 45.0 33 GGTAACA 20 7.0201897E-4 45.0 8 CCTAGCG 20 7.0201897E-4 45.0 22 CCCTACA 20 7.0201897E-4 45.0 27 CGGTTGG 25 3.8799524E-5 45.0 2 TAGCGCA 20 7.0201897E-4 45.0 24 TAAACTC 25 3.8799524E-5 45.0 10 TTCCGTT 20 7.0201897E-4 45.0 15 ATTCGAA 25 3.8799524E-5 45.0 42 >>END_MODULE