##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934052.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 127543 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.788204762315456 31.0 30.0 31.0 25.0 34.0 2 29.88822593164658 31.0 30.0 33.0 25.0 34.0 3 29.91626353465106 31.0 30.0 33.0 25.0 34.0 4 33.876857216781794 35.0 33.0 37.0 28.0 37.0 5 34.357040370698506 35.0 35.0 37.0 32.0 37.0 6 33.62747465560634 35.0 33.0 37.0 28.0 37.0 7 34.41783555349961 35.0 35.0 37.0 32.0 37.0 8 34.29766431713226 35.0 35.0 37.0 31.0 37.0 9 35.68543157993775 37.0 35.0 39.0 30.0 39.0 10 35.16109076938758 37.0 34.0 39.0 30.0 39.0 11 35.33355809413296 37.0 34.0 39.0 30.0 39.0 12 35.205075935174804 37.0 34.0 39.0 30.0 39.0 13 34.87610452945281 37.0 33.0 39.0 27.0 39.0 14 35.37200787185498 38.0 33.0 40.0 27.0 41.0 15 35.832205609088696 38.0 34.0 40.0 29.0 41.0 16 36.1615690394612 38.0 34.0 40.0 30.0 41.0 17 35.98745521118368 38.0 34.0 40.0 30.0 41.0 18 36.05641234720839 38.0 34.0 40.0 30.0 41.0 19 36.060450201108644 38.0 34.0 40.0 30.0 41.0 20 36.03089154246019 38.0 34.0 40.0 30.0 41.0 21 35.729589236571194 38.0 34.0 40.0 29.0 41.0 22 35.96145613636185 38.0 34.0 40.0 30.0 41.0 23 36.05061822287385 38.0 34.0 40.0 30.0 41.0 24 35.95976258987165 38.0 34.0 40.0 30.0 41.0 25 35.49536234838447 37.0 34.0 40.0 29.0 41.0 26 35.57183851720596 37.0 34.0 40.0 29.0 41.0 27 35.57516288624229 37.0 34.0 40.0 29.0 41.0 28 35.473408967955905 37.0 34.0 40.0 29.0 41.0 29 35.53654061767404 37.0 34.0 40.0 29.0 41.0 30 35.17674823392895 37.0 34.0 40.0 27.0 41.0 31 35.198207663297865 37.0 34.0 40.0 28.0 41.0 32 35.17518797581992 37.0 34.0 40.0 28.0 41.0 33 35.18657237167073 37.0 34.0 40.0 28.0 41.0 34 35.16712010851242 37.0 34.0 40.0 27.0 41.0 35 35.27070086167018 37.0 34.0 40.0 28.0 41.0 36 35.12398955646331 37.0 33.0 40.0 27.0 41.0 37 35.03311040198208 37.0 33.0 40.0 27.0 41.0 38 34.93913425276181 37.0 33.0 40.0 27.0 41.0 39 34.81502708890335 37.0 33.0 40.0 27.0 41.0 40 34.79456340214673 37.0 33.0 40.0 26.0 41.0 41 34.62665140384027 37.0 33.0 40.0 26.0 41.0 42 34.998988576401686 37.0 33.0 40.0 27.0 41.0 43 35.00432011164862 37.0 33.0 40.0 27.0 41.0 44 34.93639792070125 37.0 33.0 40.0 27.0 41.0 45 34.99033267211842 37.0 33.0 40.0 27.0 41.0 46 34.84975263244553 37.0 33.0 40.0 27.0 41.0 47 34.669264483350716 37.0 33.0 40.0 26.0 41.0 48 34.752938224755574 36.0 33.0 40.0 27.0 41.0 49 34.83844664152482 36.0 33.0 40.0 27.0 41.0 50 34.61203672486926 36.0 33.0 40.0 26.0 41.0 51 33.55690237802153 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 3.0 12 3.0 13 2.0 14 5.0 15 5.0 16 12.0 17 25.0 18 51.0 19 94.0 20 159.0 21 303.0 22 491.0 23 692.0 24 966.0 25 1223.0 26 1615.0 27 2081.0 28 2692.0 29 3471.0 30 4456.0 31 5827.0 32 7674.0 33 9751.0 34 13506.0 35 13268.0 36 14722.0 37 17651.0 38 19218.0 39 7570.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.128442956493103 3.8810440400492383 53.58663352751621 16.403879475941448 2 18.357730334083406 8.235653857914587 51.90249562892515 21.50412017907686 3 19.737657103878693 8.357181499572693 52.49053260469019 19.414628791858433 4 19.48597727825126 3.9147581599931 49.01484205326831 27.584422508487332 5 20.19005355056726 4.998314294002807 50.19091600479838 24.62071615063155 6 19.65690002587363 9.846875171510785 51.69942685996095 18.796797942654635 7 78.4629497502803 1.775871666810409 14.744831154983027 5.016347427926268 8 78.5452749268874 5.574590530252542 8.509287063970582 7.3708474788894724 9 72.23446210297703 5.799612679645296 11.506707541770227 10.459217675607443 10 39.732482378491966 26.662380530487756 18.538845722619037 15.066291368401243 11 32.69799204974009 26.36757799330422 24.56896889676423 16.365461060191464 12 29.254447519660037 19.625538053832827 31.416071442572306 19.70394298393483 13 23.775511004131943 28.733054734481705 29.891879601389338 17.599554659997022 14 16.76611025301271 35.428835765192915 28.641320966262356 19.163733015532017 15 13.55699646393765 25.915965595916674 41.57499823588907 18.952039704256602 16 14.753455697294246 24.293767592106192 36.59314897720768 24.359627733391875 17 15.50771112487553 24.29298354280517 29.762511466721026 30.436793865598265 18 18.679190547501626 23.02360772445371 32.24794775095458 26.049253977090082 19 21.466485812627898 25.647036685666798 29.542977662435415 23.343499839269892 20 26.299365704115473 24.641885481759093 30.472860133445188 18.58588868068024 21 22.059227084199055 28.350438675583923 28.733054734481705 20.85727950573532 22 17.41295092635425 25.945759469355433 29.82366731220059 26.817622292089727 23 18.610194209011862 28.052499941196302 28.04701159608916 25.290294253702672 24 21.043099190077072 23.691617728922797 30.6375104866594 24.627772594340733 25 16.407799722446548 27.63852191025772 29.24582297734882 26.70785538994692 26 16.720635393553547 28.55585959245117 29.515535936899713 25.207969077095566 27 21.439044087092196 29.61040590232314 27.40409116925272 21.54645884133194 28 17.218506699701276 27.263746344370134 33.570638921775405 21.94710803415319 29 17.410598778451188 26.37933873281952 30.918984185725602 25.291078303003694 30 23.26352681056585 25.959088307472772 28.551155296645053 22.22622958531632 31 23.906447237402286 27.50993782489043 25.834424468610585 22.749190469096696 32 24.11735649937668 30.811569431485854 24.191057133672565 20.8800169354649 33 23.338011494162753 27.970958813890217 25.574904149972948 23.11612554197408 34 19.8827062245674 25.55216672024337 29.98518146821072 24.57994558697851 35 19.36209748869009 24.887292912978367 28.278306139890073 27.472303458441466 36 25.683887002814735 25.172686858549664 27.081062857232464 22.062363281403137 37 22.91932916741805 27.111640779972245 30.141207279113715 19.827822773496 38 22.515543777392722 29.362646323200803 25.146813231616004 22.97499666779047 39 21.434339791286074 27.62284092423732 29.62922308554762 21.313596198928987 40 24.0671773441114 22.58375606658147 30.203147173894294 23.14591941541284 41 17.648949765961284 25.007252456034436 29.98518146821072 27.35861630979356 42 22.011400076836832 23.486980861356564 29.49358255647115 25.008036505335458 43 25.033910132269117 25.847753306727927 25.313815732733275 23.80452082826968 44 22.358733917188715 25.627435453141295 27.06459782191104 24.949232807758953 45 21.613103031918644 24.639533333856033 25.62116305873313 28.126200575492188 46 25.142892985110905 25.34831390197816 28.563700085461374 20.945093027449566 47 18.38752420752217 24.499972558274465 34.29902072242302 22.813482511780343 48 20.617360419623186 23.854699983534967 31.63168500035282 23.896254596489026 49 21.376320143010595 21.934563245336864 34.03401205867825 22.655104552974294 50 21.423363101071796 22.595516806096768 30.039280869981106 25.941839222850334 51 19.275068016276865 23.11847768987714 27.002657927130457 30.603796366715542 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 43.0 1 61.5 2 80.0 3 139.0 4 198.0 5 151.0 6 104.0 7 130.5 8 157.0 9 194.0 10 231.0 11 294.0 12 357.0 13 384.0 14 411.0 15 428.5 16 446.0 17 377.5 18 309.0 19 316.5 20 324.0 21 352.0 22 380.0 23 390.5 24 401.0 25 587.5 26 897.5 27 1021.0 28 1203.5 29 1386.0 30 1608.0 31 1830.0 32 2137.5 33 2445.0 34 2502.5 35 2560.0 36 2942.5 37 3325.0 38 3741.0 39 4157.0 40 5269.5 41 6382.0 42 7579.5 43 8777.0 44 10140.0 45 11503.0 46 14773.5 47 18044.0 48 17798.0 49 17552.0 50 16208.5 51 14865.0 52 12083.5 53 9302.0 54 7600.5 55 5899.0 56 5197.5 57 4496.0 58 3881.5 59 3267.0 60 2861.5 61 2456.0 62 2076.0 63 1696.0 64 1346.0 65 996.0 66 759.5 67 523.0 68 425.5 69 328.0 70 247.0 71 166.0 72 162.5 73 159.0 74 123.5 75 56.0 76 24.0 77 28.5 78 33.0 79 29.0 80 25.0 81 20.5 82 16.0 83 11.5 84 7.0 85 3.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 127543.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.308531240444395 #Duplication Level Percentage of deduplicated Percentage of total 1 75.23399170845629 32.58273680249014 2 10.72650578416641 9.290984217087571 3 3.774643807592737 4.9042283778804014 4 1.937107373680685 3.355731008365806 5 1.2600249832539783 2.7284915675497676 6 0.8780346506870395 2.2815834659683403 7 0.8726035085178413 2.645382341641642 8 0.655357821749914 2.270606775754059 9 0.5919944964426019 2.3074570929020015 >10 3.955681879899343 28.11051958947179 >50 0.07241522892264243 2.1843613526418544 >100 0.02896609156905697 2.27531107156018 >500 0.009051903615330304 3.405126114330069 >1k 0.0036207614461321214 1.6574802223563816 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGC 1111 0.8710787734332734 No Hit CCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC 1003 0.7864014489231084 TruSeq Adapter, Index 22 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCG 951 0.7456308852700657 No Hit CTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGCT 898 0.7040762723160032 Illumina Paired End PCR Primer 2 (95% over 21bp) GAATCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTC 850 0.6664419058670409 No Hit GCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC 847 0.6640897579639808 TruSeq Adapter, Index 22 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTGC 797 0.6248872929129784 TruSeq Adapter, Index 22 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGGAGTTAT 476 0.3732074672855429 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTC 270 0.211693311275413 No Hit GAACTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCT 256 0.20071662106113233 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGGAGTTATCGTA 246 0.19287612805093185 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCT 234 0.18346753643869126 No Hit TTCCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCT 163 0.12780003606626783 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTT 150 0.11760739515300724 No Hit TGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTG 138 0.10819880354076665 No Hit CGCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTG 137 0.1074147542397466 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCC 137 0.1074147542397466 No Hit TCCTGTCTCTTATACACATCTGACGCCGGAGTTATCGTATGCCGTCTTCTG 133 0.10427855703566641 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7762088080098477 0.0 2 0.0 0.0 0.0 3.1111076264475512 0.0 3 0.0 0.0 0.0 3.8387053777941555 0.0 4 0.0 0.0 0.0 5.191974471354759 0.0 5 0.0 0.0 0.0 7.667218114675051 0.0 6 0.0 0.0 0.0 8.712355832934774 0.0 7 0.0 0.0 0.0 9.809240805061822 0.0 8 0.0 0.0 0.0 11.531013070101848 0.0 9 0.0 0.0 0.0 12.22568075080561 0.0 10 0.0 0.0 0.0 14.33006907474342 0.0 11 0.0 0.0 0.0 16.701818210329066 0.0 12 0.0 0.0 0.0 19.978360239291845 0.0 13 0.0 0.0 0.0 20.893345773582244 0.0 14 0.0 0.0 0.0 21.221862430709642 0.0 15 0.0 0.0 0.0 21.797354617658357 0.0 16 0.0 0.0 0.0 22.98910955520883 0.0 17 0.0 0.0 0.0 24.7359713978815 0.0 18 0.0 0.0 0.0 27.0551892302988 0.0 19 0.0 0.0 0.0 28.535474310624654 0.0 20 0.0 0.0 0.0 29.716252557960846 0.0 21 0.0 0.0 0.0 31.125973201194892 0.0 22 0.0 0.0 0.0 32.41651835067389 0.0 23 0.0 0.0 0.0 33.73215307778553 0.0 24 0.0 0.0 0.0 34.645570513473885 0.0 25 0.0 0.0 0.0 35.38571305363681 0.0 26 0.0 0.0 0.0 36.1556494672385 0.0 27 0.0 0.0 0.0 36.84326070423308 0.0 28 0.0 0.0 0.0 37.505782363595024 0.0 29 0.0 0.0 0.0 38.27963902370181 0.0 30 0.0 0.0 0.0 39.156206142242226 0.0 31 0.0 0.0 0.0 40.0508063947061 0.0 32 0.0 0.0 0.0 40.782324392557804 0.0 33 0.0 0.0 0.0 41.53422767223603 0.0 34 0.0 0.0 0.0 42.28456285331222 0.0 35 0.0 0.0 0.0 43.07723669664348 0.0 36 0.0 0.0 0.0 43.826003779117634 0.0 37 0.0 0.0 0.0 44.49636593148977 0.0 38 0.0 0.0 0.0 45.13615016112213 0.0 39 0.0 0.0 0.0 45.83003379252487 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCCCAT 20 7.009689E-4 45.0 21 CGTGGGT 20 7.009689E-4 45.0 4 CAGAAGC 20 7.009689E-4 45.0 21 GGGTGAT 20 7.009689E-4 45.0 7 CCGGGTT 25 3.8712584E-5 45.0 5 CAAACTA 20 7.009689E-4 45.0 15 ACACGCG 20 7.009689E-4 45.0 36 TCCGCGG 25 3.8712584E-5 45.0 2 ATAGGTC 20 7.009689E-4 45.0 26 GAATGTC 20 7.009689E-4 45.0 27 GGAGAAT 40 6.7338988E-9 45.0 8 GGATGCG 20 7.009689E-4 45.0 12 ATGGCAA 20 7.009689E-4 45.0 11 CTATCAA 20 7.009689E-4 45.0 13 CTTTTCG 25 3.8712584E-5 45.0 1 TTTGTCG 45 3.783498E-10 45.0 1 TAGGTCC 20 7.009689E-4 45.0 27 AGCTTAG 20 7.009689E-4 45.0 36 GGCCGAT 50 2.1827873E-11 45.0 8 GGTCCAG 20 7.009689E-4 45.0 29 >>END_MODULE