SRR2934051.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934051.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	359476
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	1243	0.3457810813517453	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGC	1085	0.3018282166264229	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCG	992	0.2759572266298724	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT	925	0.2573189865248306	No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	793	0.2205988716910169	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	775	0.2155915833045878	No Hit
TCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	708	0.19695334319954602	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGGTACAT	423	0.11767127708108469	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	25	3.8854378E-5	45.000004	12
TCGACGC	25	3.8854378E-5	45.000004	14
CGTAGGC	20	7.0268114E-4	45.0	33
CGGTGAT	20	7.0268114E-4	45.0	31
TACCGGG	30	2.161325E-6	44.999996	3
CTTTGCG	145	0.0	41.89655	1
GACCGAT	150	0.0	40.5	9
CGTTTGG	190	0.0	40.263157	2
GTTCGCG	45	1.9219442E-8	40.0	1
CGGGTAC	40	3.449386E-7	39.375	6
GCGATCT	115	0.0	39.130436	9
CGATGAA	255	0.0	38.82353	19
CGCGGGC	70	0.0	38.57143	4
GCGGTCT	35	6.2363124E-6	38.57143	36
CGCATGG	35	6.2363124E-6	38.57143	2
GGTATCC	35	6.2363124E-6	38.57143	8
TCCGTTG	35	6.2363124E-6	38.57143	1
CGAGATA	70	0.0	38.57143	19
TTTCGCG	65	9.094947E-12	38.07692	1
TTACACG	65	9.094947E-12	38.07692	34