##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934051.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 359476 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.17650969744851 31.0 30.0 31.0 27.0 34.0 2 30.42521892977556 31.0 30.0 33.0 27.0 34.0 3 30.47643514448809 31.0 30.0 34.0 26.0 34.0 4 34.13471553038311 35.0 33.0 37.0 30.0 37.0 5 34.538742502976554 35.0 35.0 37.0 32.0 37.0 6 34.02975442032292 35.0 35.0 37.0 30.0 37.0 7 34.50965293927828 35.0 35.0 37.0 32.0 37.0 8 34.59589513625388 35.0 35.0 37.0 32.0 37.0 9 36.00265386284481 37.0 35.0 39.0 31.0 39.0 10 35.40148438282389 37.0 34.0 39.0 30.0 39.0 11 35.56285537838409 37.0 35.0 39.0 30.0 39.0 12 35.59571431750659 37.0 35.0 39.0 30.0 39.0 13 35.59133294016847 37.0 35.0 39.0 30.0 39.0 14 36.30963680468237 38.0 35.0 40.0 30.0 41.0 15 36.598768763422314 38.0 35.0 40.0 31.0 41.0 16 36.72886924300927 38.0 35.0 40.0 31.0 41.0 17 36.49855901367546 38.0 35.0 40.0 31.0 41.0 18 36.61056092757236 38.0 35.0 40.0 31.0 41.0 19 36.6007243877199 38.0 35.0 40.0 31.0 41.0 20 36.6227703657546 38.0 35.0 40.0 31.0 41.0 21 36.3429686543747 38.0 35.0 40.0 30.0 41.0 22 36.488388654597244 38.0 35.0 40.0 30.0 41.0 23 36.584564755366145 38.0 35.0 40.0 31.0 41.0 24 36.51447384526366 38.0 35.0 40.0 30.0 41.0 25 36.051441542689915 38.0 34.0 40.0 30.0 41.0 26 36.18261580745307 38.0 35.0 40.0 30.0 41.0 27 36.24739621003906 38.0 35.0 40.0 30.0 41.0 28 36.14695556866105 38.0 35.0 40.0 30.0 41.0 29 36.26422348084434 38.0 35.0 40.0 30.0 41.0 30 35.81119462773593 38.0 34.0 40.0 29.0 41.0 31 35.984307714562306 38.0 34.0 40.0 30.0 41.0 32 36.02429369415483 38.0 34.0 40.0 30.0 41.0 33 36.008253680356965 38.0 34.0 40.0 30.0 41.0 34 36.00833435333652 38.0 35.0 40.0 30.0 41.0 35 36.0274594131458 38.0 35.0 40.0 30.0 41.0 36 35.803811659192824 38.0 34.0 40.0 29.0 41.0 37 35.90639152544259 38.0 34.0 40.0 30.0 41.0 38 35.79756367601731 38.0 34.0 40.0 29.0 41.0 39 35.7135163404511 38.0 34.0 40.0 29.0 41.0 40 35.65244411309796 38.0 34.0 40.0 29.0 41.0 41 35.559091566613624 38.0 34.0 40.0 29.0 41.0 42 35.80334987593052 38.0 34.0 40.0 29.0 41.0 43 35.78298968498592 38.0 34.0 40.0 29.0 41.0 44 35.737743270760774 38.0 34.0 40.0 29.0 41.0 45 35.79125171082353 38.0 34.0 40.0 29.0 41.0 46 35.669841658413915 38.0 34.0 40.0 29.0 41.0 47 35.61384348329235 38.0 34.0 40.0 29.0 41.0 48 35.611453894001265 38.0 34.0 40.0 29.0 41.0 49 35.63330792598115 37.0 34.0 40.0 29.0 41.0 50 35.45172695812794 37.0 34.0 40.0 29.0 41.0 51 34.33935506125583 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 9.0 12 10.0 13 9.0 14 6.0 15 24.0 16 25.0 17 59.0 18 99.0 19 220.0 20 404.0 21 695.0 22 1059.0 23 1451.0 24 1995.0 25 2648.0 26 3534.0 27 4629.0 28 5999.0 29 7577.0 30 10110.0 31 13036.0 32 16984.0 33 23023.0 34 32333.0 35 35146.0 36 42119.0 37 54878.0 38 67648.0 39 33743.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.05355573111974 4.878767984510788 55.23512000801166 16.83255627635781 2 19.346215046345236 5.283801978435278 54.1713494085836 21.19863356663588 3 21.477372620147104 5.237345469516741 52.4911259722485 20.79415593808766 4 20.729895737128487 4.808387764412645 48.44662786945443 26.015088629004442 5 19.043552281654406 6.065217149406358 49.44419098910637 25.447039579832868 6 22.090487264796536 7.624431116402763 51.969255249307324 18.315826369493372 7 83.42281543135007 2.427422136665591 9.63930832656422 4.510454105420111 8 85.90253591338504 4.018627112797516 5.824032758793355 4.25480421502409 9 80.34889672745885 5.449877043251845 7.821106276914175 6.380119952375124 10 40.81885856079405 28.869799374645318 15.686721783929942 14.624620280630696 11 29.445915721772803 25.73996595043897 25.48960153111752 19.32451679667071 12 26.137767194471955 21.684340540119507 31.04240616897929 21.135486096429247 13 24.329023356218496 24.129566368825735 31.354248962378573 20.187161312577196 14 19.644426888025905 27.45663131891976 31.876676050696013 21.02226574235832 15 18.479954155492994 25.073996595043894 35.96178882595778 20.484260423505322 16 20.88790350398914 24.495376603723198 32.038856557878695 22.577863334408974 17 21.20364085502231 24.19493930053745 30.562819214634633 24.038600629805607 18 22.540586854198892 23.033526577574023 30.967575025870993 23.458311542356096 19 24.31817423138123 24.153211897317206 28.830575615618287 22.698038255683272 20 26.412333507661153 25.17608964158942 29.34076266565779 19.070814185091635 21 25.587800020029157 25.834269881716722 28.355439584283793 20.222490513970335 22 23.104463163048436 24.349330692452348 29.82007143731431 22.726134707184904 23 22.138612869843886 26.124692608129614 28.92793955646552 22.808754965560986 24 22.957304521025048 24.523473055224827 29.652605459057074 22.866616964693055 25 20.454494875874886 27.13644304487643 29.283178849213854 23.125883230034827 26 20.51207869231882 26.984833479842884 30.021753886212153 22.481333941626144 27 20.781081351745318 27.21489056293049 29.78168222635169 22.222345858972503 28 19.498380976755055 26.72918358944686 31.635213477394874 22.13722195640321 29 20.59247348918982 24.657000745529604 31.856368714462164 22.894157050818414 30 21.097096885466623 25.671254826469642 31.65357353481178 21.578074753251954 31 23.365954889895292 26.489390112274535 27.82800520757992 22.316649790250253 32 23.490858916867886 26.91417507705661 27.229077880025372 22.36588812605014 33 22.984288241774138 27.133383035306945 27.570964403743226 22.311364319175688 34 21.552203763255406 26.580634033982797 28.73070803057784 23.136454172183957 35 20.88178348485017 25.655398413245944 29.72882751560605 23.733990586297836 36 22.169769330915 26.498013775606715 30.568939233773605 20.76327765970468 37 22.19397122478274 26.545304832589657 29.86152065784642 21.399203284781183 38 22.73336745707641 26.13748901178382 27.253279773893112 23.87586375724666 39 22.27492238703001 26.719169012674005 29.00110160344501 22.004806996850974 40 21.248706450500173 25.93970112051987 29.595856190677544 23.215736238302416 41 18.90334820683439 26.871891308460093 28.95603600796715 25.268724476738363 42 20.61723174843383 25.776129699896515 28.665613281554265 24.94102527011539 43 21.706038789794032 26.36504245067821 28.759917212832008 23.169001546695746 44 21.674604146034785 24.825857637227518 29.353559069311995 24.1459791474257 45 21.427021553594678 24.54378039145868 28.309261258053386 25.719936796893254 46 22.055436246091535 25.419221311019374 30.01146112675116 22.513881316137933 47 19.494486419121166 26.381177046590036 31.599606093313604 22.524730440975198 48 20.604991710155893 25.296542745551857 30.60927572355317 23.489189820739075 49 21.529670965516473 23.72926148059954 31.78153757135386 22.959529982530128 50 21.084856847188686 25.02976554763044 29.659003660884174 24.226373944296697 51 20.170748533977235 25.131024046111563 28.322057661707596 26.376169758203606 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 64.0 1 205.0 2 346.0 3 528.0 4 710.0 5 560.0 6 410.0 7 393.0 8 376.0 9 438.0 10 500.0 11 502.0 12 504.0 13 545.0 14 586.0 15 577.0 16 568.0 17 658.0 18 748.0 19 837.5 20 927.0 21 1228.0 22 1529.0 23 1711.0 24 1893.0 25 2277.5 26 3344.0 27 4026.0 28 4417.5 29 4809.0 30 5656.5 31 6504.0 32 7995.0 33 9486.0 34 10308.0 35 11130.0 36 12078.5 37 13027.0 38 14747.5 39 16468.0 40 18254.5 41 20041.0 42 22282.0 43 24523.0 44 28706.0 45 32889.0 46 34353.5 47 35818.0 48 34316.5 49 32815.0 50 29880.0 51 26945.0 52 24209.5 53 21474.0 54 19726.0 55 17978.0 56 17018.0 57 16058.0 58 15934.5 59 15811.0 60 13847.0 61 11883.0 62 10458.0 63 9033.0 64 7833.0 65 6633.0 66 5142.0 67 3651.0 68 2987.5 69 2324.0 70 2061.5 71 1799.0 72 1454.0 73 1109.0 74 904.5 75 530.5 76 361.0 77 285.5 78 210.0 79 141.5 80 73.0 81 61.0 82 49.0 83 30.5 84 12.0 85 12.0 86 12.0 87 7.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 359476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.67310667321556 #Duplication Level Percentage of deduplicated Percentage of total 1 73.55205316415301 25.50278185394699 2 9.869766135325547 6.844309080996662 3 3.4629219612988393 3.6021078769540638 4 1.6706458469644394 2.317059266598502 5 1.1198628413253107 1.9414561878321377 6 0.8778940333052371 1.8263588078743158 7 0.7494528526443219 1.8190101094397586 8 0.6503646537257021 1.804013041209613 9 0.6300596168410381 1.9661511874693167 >10 7.295189432429561 46.73196966019005 >50 0.08525262339088864 1.95995106185106 >100 0.030853330370035893 1.8490316825966333 >500 0.004059648732899459 1.1804186731314987 >1k 0.0016238594931597837 0.6553815099094036 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 1243 0.3457810813517453 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGC 1085 0.3018282166264229 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCG 992 0.2759572266298724 No Hit CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 925 0.2573189865248306 No Hit GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 793 0.2205988716910169 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC 775 0.2155915833045878 No Hit TCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 708 0.19695334319954602 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGGTACAT 423 0.11767127708108469 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.27901723619935687 0.0 2 0.0 0.0 0.0 1.1313689926448498 0.0 3 0.0 0.0 0.0 1.4395954110983766 0.0 4 0.0 0.0 0.0 1.9497824611378785 0.0 5 0.0 0.0 0.0 2.9003327064950093 0.0 6 0.0 0.0 0.0 3.3095394407415237 0.0 7 0.0 0.0 0.0 3.788570029709911 0.0 8 0.0 0.0 0.0 4.51879958606416 0.0 9 0.0 0.0 0.0 4.801433197209271 0.0 10 0.0 0.0 0.0 5.671032280319131 0.0 11 0.0 0.0 0.0 6.829384993713071 0.0 12 0.0 0.0 0.0 8.34158608641467 0.0 13 0.0 0.0 0.0 8.736883686254437 0.0 14 0.0 0.0 0.0 8.884042328277827 0.0 15 0.0 0.0 0.0 9.15054134351111 0.0 16 0.0 0.0 0.0 9.662675672367557 0.0 17 0.0 0.0 0.0 10.466901823765703 0.0 18 0.0 0.0 0.0 11.369882829451758 0.0 19 0.0 0.0 0.0 12.084812337958585 0.0 20 0.0 0.0 0.0 12.827838297967041 0.0 21 0.0 0.0 0.0 13.620102593775384 0.0 22 0.0 0.0 0.0 14.51863267645128 0.0 23 0.0 0.0 0.0 15.335377048815499 0.0 24 0.0 0.0 0.0 15.972415404644538 0.0 25 0.0 0.0 0.0 16.54102081919238 0.0 26 0.0 0.0 0.0 17.069011561272518 0.0 27 0.0 0.0 0.0 17.606738697437383 0.0 28 0.0 0.0 0.0 18.215124236388522 0.0 29 0.0 0.0 0.0 18.809878823621048 0.0 30 0.0 0.0 0.0 19.485306390412713 0.0 31 0.0 0.0 0.0 20.10871379452314 0.0 32 0.0 0.0 0.0 20.710701131647177 0.0 33 0.0 0.0 0.0 21.327432151242363 0.0 34 0.0 0.0 0.0 21.907721238691874 0.0 35 0.0 0.0 0.0 22.549488700219207 0.0 36 0.0 0.0 0.0 23.19403798862789 0.0 37 0.0 0.0 0.0 23.816610844673914 0.0 38 0.0 0.0 0.0 24.447529181363986 0.0 39 0.0 0.0 0.0 25.080672979559136 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGAACT 25 3.8854378E-5 45.000004 12 TCGACGC 25 3.8854378E-5 45.000004 14 CGTAGGC 20 7.0268114E-4 45.0 33 CGGTGAT 20 7.0268114E-4 45.0 31 TACCGGG 30 2.161325E-6 44.999996 3 CTTTGCG 145 0.0 41.89655 1 GACCGAT 150 0.0 40.5 9 CGTTTGG 190 0.0 40.263157 2 GTTCGCG 45 1.9219442E-8 40.0 1 CGGGTAC 40 3.449386E-7 39.375 6 GCGATCT 115 0.0 39.130436 9 CGATGAA 255 0.0 38.82353 19 CGCGGGC 70 0.0 38.57143 4 GCGGTCT 35 6.2363124E-6 38.57143 36 CGCATGG 35 6.2363124E-6 38.57143 2 GGTATCC 35 6.2363124E-6 38.57143 8 TCCGTTG 35 6.2363124E-6 38.57143 1 CGAGATA 70 0.0 38.57143 19 TTTCGCG 65 9.094947E-12 38.07692 1 TTACACG 65 9.094947E-12 38.07692 34 >>END_MODULE