##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934049.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1017850 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.13907844967333 31.0 30.0 31.0 26.0 34.0 2 30.52940315370634 31.0 30.0 33.0 27.0 34.0 3 30.54255342142752 31.0 30.0 34.0 27.0 34.0 4 34.15935255686005 35.0 33.0 37.0 30.0 37.0 5 34.485083263742204 35.0 35.0 37.0 32.0 37.0 6 34.07207643562411 35.0 35.0 37.0 30.0 37.0 7 34.52784987964828 35.0 35.0 37.0 32.0 37.0 8 34.72907599351574 35.0 35.0 37.0 32.0 37.0 9 36.03062435525863 38.0 35.0 39.0 31.0 39.0 10 35.399351574397016 37.0 34.0 39.0 30.0 39.0 11 35.5345021368571 37.0 35.0 39.0 30.0 39.0 12 35.48173011740433 37.0 35.0 39.0 30.0 39.0 13 35.45287812546053 37.0 35.0 39.0 30.0 39.0 14 35.87213145355406 38.0 34.0 40.0 27.0 41.0 15 36.18702657562509 38.0 35.0 40.0 29.0 41.0 16 36.385958638306235 38.0 35.0 40.0 30.0 41.0 17 36.20451638257111 38.0 35.0 40.0 30.0 41.0 18 36.356281377413175 38.0 35.0 40.0 30.0 41.0 19 36.37059291644152 38.0 35.0 40.0 30.0 41.0 20 36.385216878714935 38.0 35.0 40.0 30.0 41.0 21 36.068568060126736 38.0 34.0 40.0 30.0 41.0 22 36.33479294591541 38.0 34.0 40.0 30.0 41.0 23 36.47000049123152 38.0 35.0 40.0 31.0 41.0 24 36.38741759591296 38.0 35.0 40.0 30.0 41.0 25 35.90146288745886 38.0 34.0 40.0 29.0 41.0 26 36.011518396620325 38.0 34.0 40.0 30.0 41.0 27 36.09364444662769 38.0 34.0 40.0 30.0 41.0 28 35.9945895760672 38.0 34.0 40.0 30.0 41.0 29 36.092079383013214 38.0 34.0 40.0 30.0 41.0 30 35.611258043916095 38.0 34.0 40.0 29.0 41.0 31 35.68767107137594 38.0 34.0 40.0 29.0 41.0 32 35.77147418578376 38.0 34.0 40.0 29.0 41.0 33 35.79788475708602 38.0 34.0 40.0 29.0 41.0 34 35.69860195510144 38.0 34.0 40.0 29.0 41.0 35 35.725926217026085 38.0 34.0 40.0 29.0 41.0 36 35.51617625386845 38.0 34.0 40.0 28.0 41.0 37 35.562936582011105 38.0 34.0 40.0 29.0 41.0 38 35.45869921894189 38.0 34.0 40.0 29.0 41.0 39 35.41090337476052 38.0 34.0 40.0 28.0 41.0 40 35.28248464901508 38.0 34.0 40.0 27.0 41.0 41 35.15143488726237 37.0 34.0 40.0 27.0 41.0 42 35.42519821191728 38.0 34.0 40.0 28.0 41.0 43 35.398933045144176 38.0 34.0 40.0 28.0 41.0 44 35.35086014638699 37.0 34.0 40.0 28.0 41.0 45 35.45470354177924 37.0 34.0 40.0 29.0 41.0 46 35.40252100014737 37.0 34.0 40.0 29.0 41.0 47 35.371921206464606 37.0 34.0 40.0 29.0 41.0 48 35.321099376135976 37.0 34.0 40.0 28.0 41.0 49 35.32201011936926 37.0 34.0 40.0 28.0 41.0 50 35.1336729380557 37.0 34.0 40.0 28.0 41.0 51 33.9972382964091 36.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 18.0 12 11.0 13 21.0 14 30.0 15 57.0 16 130.0 17 271.0 18 461.0 19 841.0 20 1342.0 21 2144.0 22 3193.0 23 4723.0 24 6598.0 25 8937.0 26 11765.0 27 15178.0 28 19058.0 29 24561.0 30 31075.0 31 40074.0 32 52163.0 33 69398.0 34 91111.0 35 92404.0 36 116033.0 37 150729.0 38 183282.0 39 92232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.899985263054475 4.2756791275728245 55.16136955347055 16.662966055902146 2 21.020386107972687 3.561133762342192 54.18863290268704 21.229847226998082 3 22.545365230633195 3.5829444417153806 52.4023186127622 21.469371714889228 4 20.672692439946946 4.681436360956919 47.119614874490345 27.526256324605786 5 18.57424964385715 5.623913150267721 50.54693717148893 25.254900034386207 6 23.101537554649507 6.07633737780616 52.62533772166822 18.19678734587611 7 84.43758903571253 2.286780959866385 9.101832293559955 4.173797710861129 8 85.97976126148254 2.6805521442255733 7.061354816525029 4.278331777766862 9 80.24571400501056 5.391462396227342 9.243994694699612 5.118828904062485 10 39.14407820405757 30.644790489757824 16.70756987768335 13.503561428501254 11 30.010807093383114 24.253475462985705 27.116274500171933 18.61944294345925 12 27.769415925725795 21.725696320675937 30.548607358648134 19.95628039495014 13 26.364297293314337 22.00383160583583 31.810777619492065 19.821093481357764 14 20.65549933683745 24.509603576165446 34.64537996757872 20.189517119418383 15 19.437638158864274 24.56285307265314 36.13037284472172 19.86913592376087 16 25.433904799331923 24.271945768040478 30.328240899936137 19.965908532691458 17 25.10075158422164 24.062877634229014 28.94837156751977 21.88799921402957 18 25.227882300928428 22.770840497126297 31.39833963747114 20.602937564474136 19 25.31266886083411 24.88578867220121 28.91221692783809 20.88932553912659 20 24.336100604214767 29.179938104828807 28.564621506115834 17.919339784840595 21 24.72839809402171 25.831900574740875 31.352065628530728 18.087635702706688 22 22.71611730608636 22.935992533280935 32.55617232401631 21.7917178366164 23 21.10576214569927 24.55273370339441 32.37628334233925 21.965220808567075 24 21.85980252493 26.595962076926856 29.777177383700938 21.767058014442206 25 23.248710517266787 26.123004371960505 27.593948027705455 23.03433708306725 26 20.940118878027214 26.58387778159847 28.19403644937859 24.281966890995726 27 20.977354227047208 24.944343469076976 31.859507786019552 22.218794517856267 28 18.75531758117601 25.901851942820652 30.65441862749914 24.6884118485042 29 21.12177629316697 26.77820896988751 29.437932897774722 22.6620818391708 30 23.718426094218206 24.595863830623372 30.53465638355357 21.151053691604854 31 22.396718573463673 26.715724320872425 30.0 20.8875571056639 32 24.202387385174635 26.85464459399715 27.575281230043718 21.367686790784497 33 24.47767352753353 25.737584123397355 27.75330353195461 22.031438817114505 34 20.10630250036842 26.120155229159504 31.805865304317926 21.967676966154148 35 20.262907108120057 28.167313454831262 29.111656923908235 22.458122513140445 36 23.742005207054085 27.949894385223757 27.638158864272732 20.669941543449426 37 21.37819914525716 28.721913837991845 28.3026968610306 21.59719015572039 38 21.70329616348185 27.729036694994353 28.06277938792553 22.504887753598272 39 21.192317139067644 26.456157587070788 27.45954708454094 24.891978189320625 40 22.53819325047895 26.567765387827286 28.752075453161076 22.14196590853269 41 20.166330991796432 26.989438522375597 27.628923711745344 25.215306774082624 42 21.27130716706784 25.379476347202434 30.2191875030702 23.13002898265953 43 21.434297784545855 24.10453406690573 30.90877830721619 23.552389841332218 44 21.637078154934418 24.35005157930933 29.142113277987914 24.870756987768335 45 20.669450311932014 24.362332367244683 28.015424669646805 26.952792651176498 46 20.739696418922236 25.17011347448052 29.585302352998973 24.50488775359827 47 18.350837549737193 27.16362921845066 31.588937466227833 22.896595765584323 48 19.18318023284374 28.00589477820897 30.193446971557698 22.617478017389594 49 22.47433315321511 25.055263545709096 30.051874048238936 22.418529252836862 50 20.191678538095005 25.868742938546934 28.36400255440389 25.57557596895417 51 19.475855970919095 26.390529056344253 27.31060568846097 26.823009284275678 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 222.0 1 521.0 2 820.0 3 2564.5 4 4309.0 5 2959.5 6 1610.0 7 1655.0 8 1700.0 9 1845.0 10 1990.0 11 2076.5 12 2163.0 13 2223.5 14 2284.0 15 2177.0 16 2070.0 17 2220.5 18 2371.0 19 2527.5 20 2684.0 21 3345.0 22 4006.0 23 4457.5 24 4909.0 25 6218.5 26 8981.5 27 10435.0 28 12696.0 29 14957.0 30 17361.0 31 19765.0 32 22752.0 33 25739.0 34 28773.5 35 31808.0 36 35081.5 37 38355.0 38 40777.0 39 43199.0 40 47730.0 41 52261.0 42 57054.0 43 61847.0 44 70457.0 45 79067.0 46 88589.0 47 98111.0 48 99244.5 49 100378.0 50 90609.5 51 80841.0 52 73424.0 53 66007.0 54 61556.0 55 57105.0 56 54620.5 57 52136.0 58 47820.0 59 43504.0 60 37827.0 61 32150.0 62 27636.0 63 23122.0 64 20275.0 65 17428.0 66 14396.0 67 11364.0 68 9200.0 69 7036.0 70 6015.0 71 4994.0 72 4086.5 73 3179.0 74 2782.5 75 1809.5 76 1233.0 77 838.0 78 443.0 79 307.5 80 172.0 81 131.5 82 91.0 83 72.0 84 53.0 85 34.0 86 15.0 87 8.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1017850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.20026770171243 #Duplication Level Percentage of deduplicated Percentage of total 1 73.01514034978486 25.701524865905316 2 10.1175081393062 7.122779899556653 3 3.5951697196753165 3.796528096969847 4 1.9087379690287936 2.6875234992894574 5 1.2418481961027488 2.185669447385272 6 1.010622492798381 2.134450937512497 7 0.8055753210003238 1.9849526867173024 8 0.7311643687406209 2.058974521089875 9 0.6768422384297939 2.1442525186099513 >10 6.741582675661981 42.55494002433649 >50 0.10481708663901604 2.5030310362038053 >100 0.04645887013702633 2.925308404552344 >500 0.002266286347519527 0.5165359126362169 >1k 0.002266286347519527 1.6835281492349905 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 3078 0.3024021221201552 No Hit CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGCT 2700 0.26526501940364494 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2598 0.2552438964483961 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1981 0.19462592719948912 No Hit TCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 1929 0.18951711941838187 No Hit GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 1712 0.16819767156260745 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCC 1704 0.1674117011347448 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1181 0.11602888441322395 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2947389104484944 0.0 2 0.0 0.0 0.0 1.0497617527140541 0.0 3 0.0 0.0 0.0 1.4039396767696615 0.0 4 0.0 0.0 0.0 1.9294591540993271 0.0 5 0.0 0.0 0.0 2.830476003340374 0.0 6 0.0 0.0 0.0 3.430564425013509 0.0 7 0.0 0.0 0.0 4.008940413616938 0.0 8 0.0 0.0 0.0 4.875276317728545 0.0 9 0.0 0.0 0.0 5.30048631920224 0.0 10 0.0 0.0 0.0 6.101095446283834 0.0 11 0.0 0.0 0.0 7.569877683352164 0.0 12 0.0 0.0 0.0 8.832146190499582 0.0 13 0.0 0.0 0.0 9.27582649702805 0.0 14 0.0 0.0 0.0 9.470354177924056 0.0 15 0.0 0.0 0.0 9.726777030014246 0.0 16 0.0 0.0 0.0 10.26231763029916 0.0 17 0.0 0.0 0.0 11.008400058947782 0.0 18 0.0 0.0 0.0 11.842511175517021 0.0 19 0.0 0.0 0.0 12.43473989291153 0.0 20 0.0 0.0 0.0 13.118632411455518 0.0 21 0.0 0.0 0.0 13.97190155720391 0.0 22 0.0 0.0 0.0 14.906322149629121 0.0 23 0.0 0.0 0.0 15.774131748292971 0.0 24 0.0 0.0 0.0 16.455666355553372 0.0 25 0.0 0.0 0.0 17.095937515350986 0.0 26 0.0 0.0 0.0 17.67804686348676 0.0 27 0.0 0.0 0.0 18.32480227931424 0.0 28 0.0 0.0 0.0 18.95632951810188 0.0 29 0.0 0.0 0.0 19.679324065432038 0.0 30 0.0 0.0 0.0 20.560986392886967 0.0 31 0.0 0.0 0.0 21.262563246057866 0.0 32 0.0 0.0 0.0 21.90951515449231 0.0 33 0.0 0.0 0.0 22.559217959424277 0.0 34 0.0 0.0 0.0 23.30146878223707 0.0 35 0.0 0.0 0.0 24.14294837156752 0.0 36 0.0 0.0 0.0 24.844819963648867 0.0 37 0.0 0.0 0.0 25.545512600088422 0.0 38 0.0 0.0 0.0 26.413027459841825 0.0 39 0.0 0.0 0.0 27.904701085621653 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAT 25 3.8904895E-5 45.000004 44 TTGCCCG 110 0.0 40.909092 1 CGTTTTT 1635 0.0 39.63303 1 CGTTTGG 670 0.0 39.626865 2 TTGGGAC 2090 0.0 39.07895 5 CGTATAA 35 6.247583E-6 38.57143 28 CTTTGCG 280 0.0 38.57143 1 GGCGATT 835 0.0 38.532936 8 TTTGGGA 5770 0.0 38.526863 4 TTGGGAT 3690 0.0 37.92683 5 TTTGGGC 1875 0.0 37.92 4 TTTCGCG 305 0.0 37.622948 1 GGTCCGT 30 1.1398299E-4 37.500004 10 TGGGCGA 1280 0.0 37.44141 6 GGGCGAT 1920 0.0 37.382816 7 CTTGGGA 3010 0.0 37.375416 4 TTGTTCG 250 0.0 36.899998 1 ACGGGAT 110 0.0 36.81818 5 TTACACG 515 0.0 36.699028 34 TGGGATG 1590 0.0 36.650944 6 >>END_MODULE