##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934048.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 449040 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.975841795831105 31.0 30.0 31.0 26.0 34.0 2 30.071579369321217 31.0 30.0 33.0 25.0 34.0 3 30.143559593800106 31.0 30.0 34.0 25.0 34.0 4 33.93114644575093 35.0 33.0 37.0 28.0 37.0 5 34.387281756636376 35.0 35.0 37.0 32.0 37.0 6 33.75936887582398 35.0 35.0 37.0 28.0 37.0 7 34.332322287546766 35.0 35.0 37.0 32.0 37.0 8 34.205048548013536 35.0 35.0 37.0 30.0 37.0 9 35.725258328879384 37.0 35.0 39.0 30.0 39.0 10 35.25446730803492 37.0 34.0 39.0 30.0 39.0 11 35.39197844290041 37.0 35.0 39.0 30.0 39.0 12 35.357805540709066 37.0 35.0 39.0 30.0 39.0 13 35.29717619811153 37.0 34.0 39.0 30.0 39.0 14 36.055409317655446 38.0 34.0 40.0 29.0 41.0 15 36.314949670407984 38.0 35.0 40.0 30.0 41.0 16 36.49621414573312 38.0 35.0 40.0 31.0 41.0 17 36.2197844290041 38.0 34.0 40.0 30.0 41.0 18 36.335829770176375 38.0 35.0 40.0 30.0 41.0 19 36.33756458221985 38.0 35.0 40.0 30.0 41.0 20 36.30675663637983 38.0 34.0 40.0 30.0 41.0 21 36.062201585604846 38.0 34.0 40.0 30.0 41.0 22 36.230320238731515 38.0 34.0 40.0 30.0 41.0 23 36.23097496882237 38.0 34.0 40.0 30.0 41.0 24 36.15719757705327 38.0 34.0 40.0 30.0 41.0 25 35.771960181721006 38.0 34.0 40.0 29.0 41.0 26 35.84601149118119 38.0 34.0 40.0 29.0 41.0 27 35.79955905932656 38.0 34.0 40.0 29.0 41.0 28 35.675167022982365 38.0 34.0 40.0 29.0 41.0 29 35.81661990023161 38.0 34.0 40.0 29.0 41.0 30 35.37660342063068 38.0 34.0 40.0 27.0 41.0 31 35.57787502226973 38.0 34.0 40.0 29.0 41.0 32 35.551692499554605 38.0 34.0 40.0 29.0 41.0 33 35.52793515054338 38.0 34.0 40.0 28.0 41.0 34 35.494085159451274 38.0 34.0 40.0 28.0 41.0 35 35.45453189025476 38.0 34.0 40.0 28.0 41.0 36 35.22252137894174 38.0 34.0 40.0 27.0 41.0 37 35.2901701407447 38.0 34.0 40.0 27.0 41.0 38 35.220140744699805 38.0 34.0 40.0 27.0 41.0 39 35.151349545697485 37.0 34.0 40.0 27.0 41.0 40 35.10760956707643 37.0 34.0 40.0 27.0 41.0 41 35.00887226082309 37.0 33.0 40.0 26.0 41.0 42 35.1597162836273 37.0 34.0 40.0 27.0 41.0 43 35.118216639942986 37.0 34.0 40.0 27.0 41.0 44 35.09557723142704 37.0 34.0 40.0 27.0 41.0 45 35.130404863709245 37.0 34.0 40.0 27.0 41.0 46 34.9955059682879 37.0 34.0 40.0 27.0 41.0 47 34.90097986816319 37.0 33.0 40.0 27.0 41.0 48 34.8980625334046 37.0 33.0 40.0 27.0 41.0 49 34.90604845893461 37.0 34.0 40.0 27.0 41.0 50 34.722084892214504 36.0 33.0 40.0 26.0 41.0 51 33.64678647781935 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 1.0 11 5.0 12 8.0 13 15.0 14 19.0 15 32.0 16 62.0 17 99.0 18 225.0 19 424.0 20 906.0 21 1524.0 22 2285.0 23 3145.0 24 3868.0 25 4707.0 26 5615.0 27 6877.0 28 8579.0 29 10960.0 30 14128.0 31 18006.0 32 22834.0 33 30157.0 34 41610.0 35 43192.0 36 51035.0 37 64681.0 38 76677.0 39 37356.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.290397292000712 4.750356315695706 52.016301443078575 17.942944949225012 2 18.350481026189204 7.897514698022448 52.98904329235703 20.76296098343132 3 21.107028327097808 7.815116693390343 50.39729200071263 20.680562978799216 4 19.503607696419028 5.106894708711919 49.173124888651344 26.21637270621771 5 21.949269552823804 5.666755745590593 47.83270978086585 24.551264920719756 6 22.356805629787992 9.814493140922858 50.08573846427935 17.7429627650098 7 81.98401033315518 2.6158026011045785 11.357340103331552 4.042846962408694 8 82.7712453233565 6.457108498129342 6.192098699447711 4.579547479066453 9 77.0557188669161 6.160030286834135 7.968555139853911 8.815695706395866 10 42.07286655977196 27.667468376982008 15.25877427400677 15.000890789239266 11 34.16800285052556 25.153215749153752 22.984589346160696 17.694192054159984 12 29.584669517192232 22.022759665063248 26.840370568323536 21.552200249420984 13 25.82264386246214 23.625734901122396 29.263317299127028 21.28830393728844 14 20.676999821842152 28.27944058435774 28.95532691965081 22.088232674149296 15 19.041510778549796 24.956128629966152 34.04462854088723 21.957732050596828 16 21.67713344022804 23.59099412079102 31.168938179226796 23.562934259754144 17 21.73213967575272 24.883306609656156 29.266657758774272 24.117895955816852 18 22.307366827008728 23.39390700160342 29.946775342953856 24.351950828433992 19 23.998752895065028 25.423792980580796 27.668136468911452 22.909317655442724 20 28.4814270443613 24.37310707286656 28.602797078211296 18.54266880456084 21 26.140432923570284 27.250801710315343 26.648405487261712 19.960359878852664 22 24.239488686976664 22.44722073757349 29.63633529306966 23.676955282380188 23 24.454168893639768 26.167156600748264 27.551443078567612 21.82723142704436 24 23.471851060039196 24.657491537502228 28.832175307322288 23.03848209513629 25 22.50779440584358 27.105825761624804 26.69895777659006 23.687422055941564 26 22.059282023873152 26.816987350792804 28.04159985747372 23.082130767860324 27 23.139363976483164 27.369722073757348 27.4581329057545 22.032781044004988 28 20.84558168537324 28.141590949581328 30.123597006948156 20.889230358097276 29 22.724701585604844 24.923392125423124 28.9956351327276 23.356271156244432 30 21.677578834847676 27.786834135043648 28.45871191876002 22.076875111348652 31 24.383796543737752 25.7464813825049 25.210226260466772 24.659495813290576 32 25.457420274363084 27.372394441475144 25.206440406199892 21.963744877961876 33 24.053536433279888 26.1609210760734 26.123062533404596 23.662479957242116 34 23.033582754320328 25.299973276322824 27.066185640477464 24.600258328879388 35 23.565161232852308 25.290842686620348 26.437956529485124 24.70603955104222 36 23.525743809014788 28.809682879030824 25.181498307500444 22.483075004453944 37 22.596205237840728 28.043826830571888 26.877561019062888 22.482406912524496 38 22.077320505968288 27.168403705683236 25.697487974345268 25.056787814003208 39 22.458800997683948 25.96717441653305 26.820550507749868 24.75347407803314 40 22.085337609121684 24.410742918225548 28.411500089078924 25.092419383573844 41 19.835649385355424 26.239087831818992 27.156378050953144 26.76888473187244 42 21.696508106182076 25.366782469267772 26.376714769285588 26.559994655264564 43 21.91742383752004 26.904507393550688 26.8601906288972 24.317878140032068 44 22.06908070550508 25.145866737929808 28.09103866025298 24.694013896312132 45 22.872127204703364 24.164885088188136 26.444192054159988 26.518795652948512 46 23.195038303937288 26.35578122216284 26.399875289506504 24.049305184393372 47 20.048548013539996 26.584045964724744 29.86014608943524 23.507259932300016 48 21.154462854088724 24.612506680919292 28.872928915018708 25.360101549973272 49 22.024763940851592 23.661143773383216 29.68399251737039 24.630099768394796 50 20.913281667557456 25.562756101906288 27.949180473899876 25.574781756636376 51 20.45007126313914 25.21891145554962 26.68359166221272 27.64742561909852 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 89.0 1 263.5 2 438.0 3 695.0 4 952.0 5 777.5 6 603.0 7 629.0 8 655.0 9 693.0 10 731.0 11 756.5 12 782.0 13 811.0 14 840.0 15 833.5 16 827.0 17 852.0 18 877.0 19 924.5 20 972.0 21 1417.0 22 1862.0 23 1764.0 24 1666.0 25 2340.5 26 3884.0 27 4753.0 28 5356.5 29 5960.0 30 7058.0 31 8156.0 32 9601.0 33 11046.0 34 11966.5 35 12887.0 36 13458.0 37 14029.0 38 15820.5 39 17612.0 40 19274.5 41 20937.0 42 22923.0 43 24909.0 44 25584.5 45 26260.0 46 27737.5 47 29215.0 48 35666.5 49 42118.0 50 40403.5 51 38689.0 52 37544.0 53 36399.0 54 32675.0 55 28951.0 56 27436.0 57 25921.0 58 24182.0 59 22443.0 60 21063.5 61 19684.0 62 17237.5 63 14791.0 64 12544.0 65 10297.0 66 8515.0 67 6733.0 68 5734.0 69 4735.0 70 3979.5 71 3224.0 72 2684.5 73 2145.0 74 1828.5 75 1040.5 76 569.0 77 459.0 78 349.0 79 281.5 80 214.0 81 160.5 82 107.0 83 89.5 84 72.0 85 42.0 86 12.0 87 7.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 449040.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.85341800412399 #Duplication Level Percentage of deduplicated Percentage of total 1 74.50493689929273 24.477418353233453 2 8.712300595036753 5.724577064526414 3 3.003135772867033 2.9598982460741583 4 1.613245037890243 2.12002454291548 5 1.0741169055320323 1.764420584137001 6 0.9077395574211408 1.7893408271301152 7 0.7763553104023826 1.7854147872659636 8 0.70901941030588 1.8634968847853262 9 0.6168053008288541 1.8237746137760809 >10 7.934185717321227 48.81825385683782 >50 0.10769000193037509 2.264084825560806 >100 0.03292433180036946 1.6944016923849607 >500 0.004115541475046182 0.877510332510578 >1k 0.0034296178958718184 2.037383388861874 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGC 2782 0.6195439159094959 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCG 2159 0.48080349189381794 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTC 1894 0.4217887047924461 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAGCTCCAT 1113 0.2478621058257616 No Hit CCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 1093 0.24340815962943166 No Hit CTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGCT 876 0.19508284339925175 No Hit GCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 874 0.19463744877961875 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGCTCCATCGTA 564 0.12560128273650453 No Hit TCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 534 0.11892036344200961 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTC 533 0.11869766613219312 No Hit GAACTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCT 513 0.11424371993586316 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21735257438090147 0.0 2 0.0 0.0 0.0 0.8460270799928736 0.0 3 0.0 0.0 0.0 1.0613753785854267 0.0 4 0.0 0.0 0.0 1.4996436843042935 0.0 5 0.0 0.0 0.0 2.4465526456440405 0.0 6 0.0 0.0 0.0 2.761892036344201 0.0 7 0.0 0.0 0.0 3.134464635667201 0.0 8 0.0 0.0 0.0 3.729957242116515 0.0 9 0.0 0.0 0.0 3.945305540709068 0.0 10 0.0 0.0 0.0 4.921833244254409 0.0 11 0.0 0.0 0.0 5.771200783894531 0.0 12 0.0 0.0 0.0 7.368608587208267 0.0 13 0.0 0.0 0.0 7.707108498129343 0.0 14 0.0 0.0 0.0 7.841617673258507 0.0 15 0.0 0.0 0.0 8.167423837520042 0.0 16 0.0 0.0 0.0 8.5974523427757 0.0 17 0.0 0.0 0.0 9.142169962586852 0.0 18 0.0 0.0 0.0 9.731427044361304 0.0 19 0.0 0.0 0.0 10.457420274363086 0.0 20 0.0 0.0 0.0 10.980981649741672 0.0 21 0.0 0.0 0.0 11.64996436843043 0.0 22 0.0 0.0 0.0 12.29467308034919 0.0 23 0.0 0.0 0.0 12.902191341528594 0.0 24 0.0 0.0 0.0 13.437332977017638 0.0 25 0.0 0.0 0.0 13.91212364154641 0.0 26 0.0 0.0 0.0 14.341484054872618 0.0 27 0.0 0.0 0.0 14.75391947265277 0.0 28 0.0 0.0 0.0 15.192187778371638 0.0 29 0.0 0.0 0.0 15.64025476572243 0.0 30 0.0 0.0 0.0 16.174282914662392 0.0 31 0.0 0.0 0.0 16.66956173169428 0.0 32 0.0 0.0 0.0 17.155709959023696 0.0 33 0.0 0.0 0.0 17.639408515945128 0.0 34 0.0 0.0 0.0 18.128674505611972 0.0 35 0.0 0.0 0.0 18.634865490824872 0.0 36 0.0 0.0 0.0 19.158426866203456 0.0 37 0.0 0.0 0.0 19.686442187778372 0.0 38 0.0 0.0 0.0 20.213121325494388 0.0 39 0.0 0.0 0.0 20.744477106716552 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGGG 20 7.0286903E-4 45.0 32 CGAACCC 25 3.8869963E-5 45.0 34 CGAAATA 20 7.0286903E-4 45.0 17 GCGAACC 25 3.8869963E-5 45.0 33 ATTCGCG 20 7.0286903E-4 45.0 1 TACGGGA 90 0.0 45.0 4 TACGCGG 20 7.0286903E-4 45.0 2 ACTACGG 20 7.0286903E-4 45.0 25 TGTTACG 35 1.2097189E-7 45.0 1 TACTACG 20 7.0286903E-4 45.0 24 CGACTCC 20 7.0286903E-4 45.0 28 TACCGGT 20 7.0286903E-4 45.0 40 TTTAGCG 30 2.1625365E-6 44.999996 1 GCCGATC 30 2.1625365E-6 44.999996 9 TTGCGGA 30 2.1625365E-6 44.999996 3 CTACGGC 65 0.0 41.538464 6 CGATGAA 515 0.0 40.631065 19 TCGGGTA 50 1.0786607E-9 40.5 5 CGAATAT 50 1.0786607E-9 40.5 14 TGGGCGA 700 0.0 40.17857 6 >>END_MODULE