##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934045.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 722394 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.99430919968881 31.0 30.0 31.0 26.0 34.0 2 30.382795261311696 31.0 30.0 33.0 27.0 34.0 3 30.404755576596706 31.0 30.0 34.0 26.0 34.0 4 34.021545029443764 35.0 33.0 37.0 30.0 37.0 5 34.37790319410183 35.0 35.0 37.0 32.0 37.0 6 33.99796925223632 35.0 35.0 37.0 30.0 37.0 7 34.40504489239944 35.0 35.0 37.0 32.0 37.0 8 34.58585481053276 35.0 35.0 37.0 32.0 37.0 9 35.84737553191195 37.0 35.0 39.0 30.0 39.0 10 35.215430914431735 37.0 34.0 39.0 30.0 39.0 11 35.34858816656838 37.0 35.0 39.0 30.0 39.0 12 35.28610149032246 37.0 34.0 39.0 30.0 39.0 13 35.261066675526095 37.0 34.0 39.0 30.0 39.0 14 35.80189342657885 38.0 34.0 40.0 27.0 41.0 15 36.088729972840305 38.0 34.0 40.0 29.0 41.0 16 36.22930838295999 38.0 35.0 40.0 30.0 41.0 17 36.0338928617901 38.0 34.0 40.0 30.0 41.0 18 36.18242953291417 38.0 34.0 40.0 30.0 41.0 19 36.161252723582976 38.0 34.0 40.0 30.0 41.0 20 36.21387497681321 38.0 34.0 40.0 30.0 41.0 21 35.8643330370961 38.0 34.0 40.0 29.0 41.0 22 36.09022500186879 38.0 34.0 40.0 30.0 41.0 23 36.2410235965415 38.0 34.0 40.0 30.0 41.0 24 36.14094801451839 38.0 34.0 40.0 30.0 41.0 25 35.64231015207768 38.0 34.0 40.0 29.0 41.0 26 35.768551510671465 38.0 34.0 40.0 29.0 41.0 27 35.86290583808836 38.0 34.0 40.0 30.0 41.0 28 35.7462977267253 38.0 34.0 40.0 29.0 41.0 29 35.860074972937205 38.0 34.0 40.0 30.0 41.0 30 35.36389421839052 38.0 34.0 40.0 27.0 41.0 31 35.47438655359817 38.0 34.0 40.0 29.0 41.0 32 35.544133810635195 38.0 34.0 40.0 29.0 41.0 33 35.52736733693801 38.0 34.0 40.0 29.0 41.0 34 35.48443231809788 38.0 34.0 40.0 28.0 41.0 35 35.49516745709405 38.0 34.0 40.0 28.0 41.0 36 35.253785330442945 38.0 34.0 40.0 27.0 41.0 37 35.3375830917754 38.0 34.0 40.0 28.0 41.0 38 35.22308463248587 37.0 34.0 40.0 27.0 41.0 39 35.15289994102941 37.0 34.0 40.0 27.0 41.0 40 35.07323842667575 37.0 33.0 40.0 27.0 41.0 41 34.93724200367112 37.0 33.0 40.0 27.0 41.0 42 35.13472703261655 37.0 33.0 40.0 27.0 41.0 43 35.10749535572001 37.0 33.0 40.0 27.0 41.0 44 35.06055144422573 37.0 33.0 40.0 27.0 41.0 45 35.15874993424641 37.0 34.0 40.0 28.0 41.0 46 35.07239954927643 37.0 33.0 40.0 28.0 41.0 47 35.01904362439333 37.0 33.0 40.0 27.0 41.0 48 34.9603678878839 37.0 33.0 40.0 27.0 41.0 49 34.95106825361229 36.0 33.0 40.0 27.0 41.0 50 34.76975999246948 36.0 33.0 40.0 27.0 41.0 51 33.65437005290742 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 9.0 11 8.0 12 12.0 13 16.0 14 26.0 15 57.0 16 109.0 17 204.0 18 325.0 19 642.0 20 1097.0 21 1592.0 22 2440.0 23 3519.0 24 5034.0 25 6881.0 26 8972.0 27 11612.0 28 14705.0 29 18728.0 30 24362.0 31 30429.0 32 38838.0 33 51461.0 34 68193.0 35 69323.0 36 84313.0 37 106944.0 38 120349.0 39 52191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.265143398200983 4.694944863883144 54.79765889528429 17.242252842631583 2 19.861322214747076 3.580732951824074 54.61880912632164 21.9391357071072 3 22.215162362921063 3.5117955021774825 52.28711755634736 21.985924578554087 4 20.98993070263596 5.261948465795674 45.664415817407125 28.083705014161247 5 18.262056440114396 5.694261026531229 50.060216446980455 25.98346608637392 6 22.447722434018004 5.759599332220367 52.33266057027052 19.460017663491115 7 83.81035833630955 2.650769524663826 8.808627978637697 4.73024416038893 8 85.14093417165702 2.7970885693956484 6.77345049931201 5.288526759635324 9 79.31530439067878 5.427370659224744 9.753680124696496 5.50364482539999 10 41.99024355130303 25.653729128425763 16.89715030855738 15.45887701171383 11 31.642012530558116 24.208257543667305 23.987325476125218 20.162404449649358 12 28.290102077259778 21.10828716739065 29.938094723931812 20.663516031417757 13 25.394590763489177 22.771645390188734 30.800920273424197 21.032843572897892 14 20.593748010088678 23.90800588044751 33.53225525128946 21.965990858174347 15 19.163088287001276 23.219461955664084 35.36408109701908 22.253368660315562 16 23.82619456972234 22.868406991198707 30.65349379978239 22.65190463929656 17 24.399012173412295 23.868415296915536 27.752168484234364 23.98040404543781 18 25.174073981788332 22.10483475776377 30.366808140709917 22.354283119737982 19 25.010036074496746 24.69607997851588 27.44956353458085 22.844320412406528 20 26.386708638222355 26.758666323363705 27.3166720653826 19.537952973031338 21 25.144588687059972 25.87770662547031 28.987782290550584 19.989922396919134 22 23.762517407398178 22.76278595890885 30.268800682176213 23.205895951516762 23 23.471402032685766 23.500195184345387 29.356002403120733 23.672400379848117 24 24.225976406227073 23.667832235594428 29.182551350094272 22.92364000808423 25 22.79462454007093 25.300736163367915 26.07690540065394 25.82773389590722 26 21.191898050094547 25.356799751935927 27.22517075169506 26.22613144627447 27 20.794884785864777 23.94994975041321 30.262156108716297 24.993009355005714 28 18.57310553520655 24.940129624553915 29.15888005714333 27.327884783096206 29 20.390396376492607 24.932792908025263 27.951228830804244 26.72558188467789 30 22.639307635445476 24.68832797614598 28.765742794098507 23.906621594310028 31 24.6639645401263 25.153032832498607 26.31583318798329 23.8671694393918 32 24.404964603803464 24.937361052278952 25.60763240004762 25.050041943869967 33 23.891532875411478 24.388214741539933 27.081204993396955 24.63904738965163 34 21.80043023613153 23.744383258997168 28.827481955830198 25.627704549041102 35 21.4839824251032 25.422138057625066 27.269744765321974 25.824134751949767 36 23.18997666093572 26.20052215273106 26.975168675265852 23.63433251106737 37 21.665600766340805 26.322339332829454 27.423400526582448 24.588659374247293 38 21.819118098987534 26.795765191848215 25.98318922914642 25.40192748001783 39 22.06385988809431 25.43376606117991 26.86373364119857 25.638640409527213 40 24.722104557900536 23.96143932535431 27.170214592037034 24.146241524708124 41 21.937751420969718 23.616475219893854 27.00811468533792 27.43765867379851 42 21.207402054834343 22.574661472825078 29.608634623211156 26.609301849129423 43 20.695908327034832 22.89553899949335 29.909163143658446 26.49938952981337 44 21.188714191978338 23.029399468987837 27.604049867523816 28.17783647151001 45 21.568147022262092 22.971674737054848 25.98775737340011 29.47242086728295 46 21.73841421717235 23.526496620957538 28.23306948839553 26.502019673474585 47 19.652018150759833 24.028715631635922 30.61777921743536 25.701487000168882 48 20.073394851009283 24.204519971096104 29.77461053109522 25.94747464679939 49 22.335179971040734 22.403563706232333 29.84368640935556 25.417569913371374 50 21.617842894597686 23.08172548498465 28.002585846504818 27.297845773912847 51 20.857454519278953 22.747005096941557 26.909415083735468 29.48612530004402 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 152.0 1 414.0 2 676.0 3 1219.0 4 1762.0 5 1323.0 6 884.0 7 997.0 8 1110.0 9 1173.0 10 1236.0 11 1275.5 12 1315.0 13 1322.5 14 1330.0 15 1392.0 16 1454.0 17 1545.0 18 1636.0 19 1702.5 20 1769.0 21 2099.5 22 2430.0 23 2591.5 24 2753.0 25 3440.5 26 5079.5 27 6031.0 28 6963.5 29 7896.0 30 9275.5 31 10655.0 32 12349.0 33 14043.0 34 16695.0 35 19347.0 36 19700.5 37 20054.0 38 22524.0 39 24994.0 40 26667.0 41 28340.0 42 30769.5 43 33199.0 44 35888.5 45 38578.0 46 41577.5 47 44577.0 48 50911.5 49 57246.0 50 64708.5 51 72171.0 52 71754.5 53 71338.0 54 63404.0 55 55470.0 56 51341.0 57 47212.0 58 43347.5 59 39483.0 60 35187.5 61 30892.0 62 27998.5 63 25105.0 64 21623.5 65 18142.0 66 15178.0 67 12214.0 68 10500.0 69 8786.0 70 7387.0 71 5988.0 72 4670.5 73 3353.0 74 2781.0 75 1783.5 76 1358.0 77 964.5 78 571.0 79 459.0 80 347.0 81 220.5 82 94.0 83 70.0 84 46.0 85 28.5 86 11.0 87 8.5 88 6.0 89 4.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 722394.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.1313084917889 #Duplication Level Percentage of deduplicated Percentage of total 1 73.1141196508489 27.148229318612355 2 10.267250271664425 7.624728743991503 3 3.651719671714213 4.0677938896786365 4 1.8912978854212645 2.8090546093378 5 1.328736929121986 2.466887040983035 6 1.0183204518451714 2.2686942504576555 7 0.8501623014054464 2.2097347077102394 8 0.7880915703146144 2.3410296973704234 9 0.7074734763541581 2.3642474310238115 >10 6.265165864589592 40.26675439957469 >50 0.07542431262896568 1.9440388539163078 >100 0.038466398547462505 2.624585434108719 >500 0.0022627293263213183 0.6423183794620221 >1k 0.0015084862175475456 1.2219032437727502 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 2925 0.4049036952134154 No Hit CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCT 2010 0.27824151363383415 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 1915 0.2650907953277574 No Hit GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGC 1876 0.25969207939157857 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 938 0.12984603969578928 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 892 0.12347832346337316 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCC 837 0.11586474970722348 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.30509666470098035 0.0 2 0.0 0.0 0.0 1.3586768439383494 0.0 3 0.0 0.0 0.0 1.7538905361893924 0.0 4 0.0 0.0 0.0 2.415717738519423 0.0 5 0.0 0.0 0.0 3.4589157717256787 0.0 6 0.0 0.0 0.0 4.102608825654698 0.0 7 0.0 0.0 0.0 4.732182160981403 0.0 8 0.0 0.0 0.0 5.672250876945268 0.0 9 0.0 0.0 0.0 6.107470438569534 0.0 10 0.0 0.0 0.0 6.899835823664095 0.0 11 0.0 0.0 0.0 8.462141158426011 0.0 12 0.0 0.0 0.0 9.809189998809513 0.0 13 0.0 0.0 0.0 10.314454438990357 0.0 14 0.0 0.0 0.0 10.497595494979194 0.0 15 0.0 0.0 0.0 10.770715149904346 0.0 16 0.0 0.0 0.0 11.387276195538723 0.0 17 0.0 0.0 0.0 12.29827490261547 0.0 18 0.0 0.0 0.0 13.255647195297858 0.0 19 0.0 0.0 0.0 13.904185250708062 0.0 20 0.0 0.0 0.0 14.643809333964567 0.0 21 0.0 0.0 0.0 15.661813359468656 0.0 22 0.0 0.0 0.0 16.696428818622525 0.0 23 0.0 0.0 0.0 17.64480325141128 0.0 24 0.0 0.0 0.0 18.38941076476272 0.0 25 0.0 0.0 0.0 19.095950409333412 0.0 26 0.0 0.0 0.0 19.7266311735701 0.0 27 0.0 0.0 0.0 20.381536945212723 0.0 28 0.0 0.0 0.0 21.046548005658963 0.0 29 0.0 0.0 0.0 21.784787802777984 0.0 30 0.0 0.0 0.0 22.644844779995402 0.0 31 0.0 0.0 0.0 23.33145070418636 0.0 32 0.0 0.0 0.0 23.995769621563856 0.0 33 0.0 0.0 0.0 24.722519843741782 0.0 34 0.0 0.0 0.0 25.489414363906675 0.0 35 0.0 0.0 0.0 26.286624750482424 0.0 36 0.0 0.0 0.0 26.972676960218386 0.0 37 0.0 0.0 0.0 27.67977031924407 0.0 38 0.0 0.0 0.0 28.492899996400855 0.0 39 0.0 0.0 0.0 29.641303776055725 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCAAT 20 7.031544E-4 45.0 17 GCGATAT 35 1.2110831E-7 45.0 9 TTCGCGA 20 7.031544E-4 45.0 2 CTACGAA 95 0.0 42.63158 11 GGCGATA 70 0.0 41.785713 8 TTTGTCG 285 0.0 41.05263 1 TTACACG 385 0.0 40.909092 34 TTGGGAC 1220 0.0 40.758194 5 GCTACGA 100 0.0 40.499996 10 TCGTTCA 90 0.0 40.0 16 CGCGACC 180 0.0 40.0 10 CGAGATA 465 0.0 39.67742 19 AGACACG 115 0.0 39.130436 24 ACACGCG 390 0.0 38.653847 36 TACGAAT 105 0.0 38.57143 12 ACCGGTA 35 6.245067E-6 38.571426 41 CGTTAGG 35 6.245067E-6 38.571426 2 TTTGGGC 1620 0.0 38.333336 4 CGTTTGG 530 0.0 38.207546 2 TACACGC 415 0.0 37.95181 35 >>END_MODULE