##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934044.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 785758 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.007288503585073 31.0 30.0 31.0 26.0 34.0 2 30.09099748268551 31.0 30.0 33.0 25.0 34.0 3 30.176138200311037 31.0 30.0 34.0 25.0 34.0 4 33.99310983788902 35.0 33.0 37.0 28.0 37.0 5 34.474968119955506 35.0 35.0 37.0 32.0 37.0 6 33.9050369197641 35.0 35.0 37.0 30.0 37.0 7 34.50854588817422 35.0 35.0 37.0 32.0 37.0 8 34.48529190921378 35.0 35.0 37.0 31.0 37.0 9 35.96162049893224 37.0 35.0 39.0 31.0 39.0 10 35.386736119772245 37.0 34.0 39.0 30.0 39.0 11 35.50887041557324 37.0 35.0 39.0 30.0 39.0 12 35.594401838734065 37.0 35.0 39.0 30.0 39.0 13 35.590706044354626 37.0 35.0 39.0 30.0 39.0 14 36.22818221386228 38.0 35.0 40.0 29.0 41.0 15 36.451188533874294 38.0 35.0 40.0 30.0 41.0 16 36.67152991124494 38.0 35.0 40.0 31.0 41.0 17 36.34762356857964 38.0 35.0 40.0 30.0 41.0 18 36.48122322648958 38.0 35.0 40.0 30.0 41.0 19 36.43431438178167 38.0 35.0 40.0 30.0 41.0 20 36.33095431417816 38.0 35.0 40.0 30.0 41.0 21 36.101143100038435 38.0 34.0 40.0 30.0 41.0 22 36.32070942962083 38.0 35.0 40.0 30.0 41.0 23 36.328123926196106 38.0 35.0 40.0 30.0 41.0 24 36.23624958320501 38.0 35.0 40.0 30.0 41.0 25 35.82299384797864 38.0 34.0 40.0 29.0 41.0 26 35.931696527429565 38.0 34.0 40.0 30.0 41.0 27 35.92641373043609 38.0 34.0 40.0 30.0 41.0 28 35.81447595824669 38.0 34.0 40.0 29.0 41.0 29 35.95544302444264 38.0 34.0 40.0 30.0 41.0 30 35.5050677180506 38.0 34.0 40.0 27.0 41.0 31 35.63575681062108 38.0 34.0 40.0 29.0 41.0 32 35.54659704387356 38.0 34.0 40.0 28.0 41.0 33 35.46887845876211 38.0 34.0 40.0 27.0 41.0 34 35.36216239605578 38.0 34.0 40.0 27.0 41.0 35 35.37773462058293 38.0 34.0 40.0 27.0 41.0 36 35.12075728150398 38.0 34.0 40.0 26.0 41.0 37 35.18264020219966 38.0 34.0 40.0 26.0 41.0 38 35.196085817770864 38.0 34.0 40.0 26.0 41.0 39 35.044800052942506 38.0 34.0 40.0 26.0 41.0 40 35.02696377256102 38.0 34.0 40.0 26.0 41.0 41 34.77894593500798 38.0 33.0 40.0 25.0 41.0 42 35.02066794102001 38.0 34.0 40.0 26.0 41.0 43 35.002686577801306 38.0 34.0 40.0 26.0 41.0 44 34.99288203238147 38.0 34.0 40.0 26.0 41.0 45 35.050444284372546 38.0 34.0 40.0 26.0 41.0 46 34.977290718007325 38.0 34.0 40.0 26.0 41.0 47 34.8876142527343 37.0 34.0 40.0 26.0 41.0 48 34.863508866597606 37.0 34.0 40.0 26.0 41.0 49 34.91154019430919 37.0 34.0 40.0 26.0 41.0 50 34.738287106208276 37.0 33.0 40.0 26.0 41.0 51 33.700294492706405 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 4.0 12 14.0 13 24.0 14 10.0 15 50.0 16 80.0 17 203.0 18 410.0 19 831.0 20 1530.0 21 2632.0 22 4349.0 23 5969.0 24 7554.0 25 9518.0 26 11246.0 27 12899.0 28 14899.0 29 18221.0 30 23463.0 31 30225.0 32 38333.0 33 49784.0 34 65252.0 35 71891.0 36 89187.0 37 113422.0 38 140191.0 39 73561.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.334645017931727 3.947780359856343 52.59278301970836 18.12479160250357 2 20.179113671130295 7.917577676587448 52.482698235334546 19.42061041694771 3 18.751320381084252 7.649810755983394 53.74071915271623 19.85814971021612 4 17.936056648484648 4.440807475075023 52.589983175481514 25.033152700958823 5 20.445607935267603 5.103352431664711 51.63498176283283 22.816057870234857 6 20.545384202260745 9.25933938948124 52.91425604320923 17.28102036504878 7 80.87948197791177 1.6586531731143686 13.714400616983854 3.747464231990002 8 82.76174089223399 5.41515326601829 8.046370511022477 3.776735330725236 9 77.69402284163827 5.001921711264791 9.415748869244728 7.888306577852214 10 38.12853321251581 34.57934885804535 15.896624660518889 11.395493268919948 11 26.668007198144977 24.014263933679324 31.13668584984181 18.181043018333888 12 23.709589975539544 21.9614690528127 32.52693577411875 21.80200519752901 13 24.261795616462063 22.72239035428211 34.422812112635185 18.59300191662064 14 19.259492108257252 26.89008575159273 32.962820613980384 20.887601526169636 15 17.305073572270345 25.17594475652809 36.460589647194176 21.058392024007393 16 21.4086270836568 26.03676959063732 30.767360943191164 21.78724238251472 17 21.760898393653008 27.01722413262099 30.310095474688136 20.91178199903787 18 21.29714237716956 24.235451627600355 31.988093026097093 22.479312969132987 19 21.610724930576588 26.413221373501766 29.91315392270903 22.062899773212617 20 23.487893219031815 27.914828738619267 30.828448453595126 17.76882958875379 21 22.792259194306645 28.68822207346282 30.829721110061875 17.68979762216866 22 21.376810671988068 23.856072734862387 33.56402352887275 21.203093064276786 23 21.017157954484713 26.827598319075342 31.32682072597415 20.828423000465794 24 20.03212184922075 27.54626742584867 31.050908803982907 21.37070192094767 25 20.367721359502543 29.874210634826497 28.3583495172814 21.399718488389556 26 19.77033641401042 27.30026293082603 30.38747298786649 22.541927667297056 27 21.333158555178567 26.996988894799674 30.451487608143985 21.21836494187778 28 17.63952769173206 28.02453172605306 31.619913510266517 22.71602707194836 29 19.6739963194775 25.379060728621276 31.930059891213325 23.016883060687896 30 21.680593770601124 27.36325942593012 30.03532894351696 20.920817859951793 31 21.53818351197188 26.607174219034356 28.389529600716763 23.465112668277 32 23.594796362238753 27.076784455264853 27.51992343698696 21.808495745509433 33 22.44940554216438 26.099002491861363 27.407293339679644 24.044298626294612 34 20.205712191285357 26.576884995125727 29.501195024422277 23.71620778916664 35 21.41448130340385 26.821744099328292 28.495287353103627 23.268487244164234 36 21.53283835481153 28.468561567301894 27.669969634416702 22.328630443469873 37 20.738955250853316 27.845596226828107 28.381257333682893 23.034191188635685 38 20.326869086919892 26.9009033315601 27.527559375787458 25.24466820573255 39 19.734320236001416 28.567446974768313 27.54295851903512 24.15527427019515 40 21.771843239267053 26.27501088121279 28.24317410704059 23.70997177247957 41 19.839950722741605 28.178395892883053 27.528577500960854 24.453075883414485 42 21.394373331229207 26.296009712914152 29.738290924177672 22.571326031678964 43 20.171859529269824 27.527304844494104 29.186085283255146 23.114750342980916 44 21.37897418798154 25.743676806344958 29.014658457184016 23.862690548489486 45 20.299379707238106 25.24530453396593 27.656861272809184 26.798454485986777 46 21.25476291682681 27.108091804346884 28.24966465502101 23.387480623805292 47 18.00528916027581 27.060367186843788 31.34680143250212 23.587542220378285 48 19.54634887586254 27.649225334008694 28.980296732581788 23.82412905754698 49 21.42249903914437 25.117020762117598 30.096416453920927 23.364063744817106 50 20.297725253831334 26.324771749062688 28.545430017893548 24.83207297921243 51 19.424046589407933 25.601775610302408 27.96598952858259 27.008188271707066 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 134.0 1 304.0 2 474.0 3 3746.5 4 7019.0 5 4820.5 6 2622.0 7 2626.5 8 2631.0 9 2926.0 10 3221.0 11 3417.0 12 3613.0 13 3658.0 14 3703.0 15 3657.5 16 3612.0 17 3553.0 18 3494.0 19 3487.5 20 3481.0 21 3679.5 22 3878.0 23 4177.5 24 4477.0 25 5378.0 26 7881.0 27 9483.0 28 11215.0 29 12947.0 30 15036.0 31 17125.0 32 19723.5 33 22322.0 34 25082.0 35 27842.0 36 29902.0 37 31962.0 38 34025.5 39 36089.0 40 38065.0 41 40041.0 42 42627.0 43 45213.0 44 46722.5 45 48232.0 46 51412.5 47 54593.0 48 67411.5 49 80230.0 50 75990.5 51 71751.0 52 67514.0 53 63277.0 54 55335.0 55 47393.0 56 42238.0 57 37083.0 58 32272.0 59 27461.0 60 23966.5 61 20472.0 62 17738.0 63 15004.0 64 12794.0 65 10584.0 66 8594.5 67 6605.0 68 5429.0 69 4253.0 70 3603.5 71 2954.0 72 2346.0 73 1738.0 74 1420.0 75 841.0 76 580.0 77 552.0 78 524.0 79 340.0 80 156.0 81 100.5 82 45.0 83 40.5 84 36.0 85 24.0 86 12.0 87 11.0 88 10.0 89 5.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 785758.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.08720293846012 #Duplication Level Percentage of deduplicated Percentage of total 1 74.30976849704916 26.816316960630044 2 8.728227916310196 6.29954664218038 3 3.2606850801573906 3.5300701261814664 4 1.8692557919829684 2.698248524367255 5 1.3335025091957613 2.406118783414662 6 1.11096302436071 2.4054928870338212 7 0.9645881554533717 2.436650196251653 8 0.9050791916993697 2.612942117298609 9 0.8356487088046954 2.7140602085907495 >10 6.576249885485748 39.78055013764838 >50 0.0689024582286129 1.7107871850620835 >100 0.029631623515128117 1.924651506110164 >500 0.004284090146765261 1.2274017604063805 >1k 0.0028560600978435077 2.773667733787023 >5k 3.5700751223043846E-4 0.6634952310373529 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGC 5150 0.6554180803758919 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCG 4796 0.6103660414529665 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4729 0.6018392431257461 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC 3255 0.4142496799268986 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGCCCAGAT 2258 0.28736583019199297 No Hit CCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 2155 0.2742574685844751 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 1685 0.2144426146472578 Illumina Single End Adapter 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 1556 0.1980253462261918 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGCCCAGATCGTA 1095 0.13935588310904884 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCC 994 0.1265020527948809 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTC 928 0.11810252011433546 No Hit CGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTG 913 0.1161935354142115 No Hit GAACTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCT 912 0.11606626976753656 No Hit TCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGC 878 0.11173923778058893 Illumina Single End Adapter 2 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCT 872 0.11097564390053936 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTC 838 0.10664861191359172 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.23416878988187204 0.0 2 0.0 0.0 0.0 0.8862779634442156 0.0 3 0.0 0.0 0.0 1.1816615293767292 0.0 4 0.0 0.0 0.0 1.716177245411437 0.0 5 0.0 0.0 0.0 2.896184321381392 0.0 6 0.0 0.0 0.0 3.5183860679751273 0.0 7 0.0 0.0 0.0 4.185130790905088 0.0 8 0.0 0.0 0.0 5.063645549902133 0.0 9 0.0 0.0 0.0 5.456260069894293 0.0 10 0.0 0.0 0.0 6.725989426770075 0.0 11 0.0 0.0 0.0 7.818055940887652 0.0 12 0.0 0.0 0.0 9.5600681125741 0.0 13 0.0 0.0 0.0 9.91730278279063 0.0 14 0.0 0.0 0.0 10.090129530975187 0.0 15 0.0 0.0 0.0 10.40956630412926 0.0 16 0.0 0.0 0.0 10.783600039706881 0.0 17 0.0 0.0 0.0 11.335042086749356 0.0 18 0.0 0.0 0.0 11.910919137953416 0.0 19 0.0 0.0 0.0 12.708238414371856 0.0 20 0.0 0.0 0.0 13.204828967697434 0.0 21 0.0 0.0 0.0 13.822194619717521 0.0 22 0.0 0.0 0.0 14.514519737629143 0.0 23 0.0 0.0 0.0 15.171465005765134 0.0 24 0.0 0.0 0.0 15.696435798299222 0.0 25 0.0 0.0 0.0 16.166809628409766 0.0 26 0.0 0.0 0.0 16.598112904991105 0.0 27 0.0 0.0 0.0 17.053723920087354 0.0 28 0.0 0.0 0.0 17.5210433746777 0.0 29 0.0 0.0 0.0 18.03468752465772 0.0 30 0.0 0.0 0.0 18.653834895731254 0.0 31 0.0 0.0 0.0 19.150934511643534 0.0 32 0.0 0.0 0.0 19.64790686190914 0.0 33 0.0 0.0 0.0 20.152515150975237 0.0 34 0.0 0.0 0.0 20.700266494264138 0.0 35 0.0 0.0 0.0 21.30503284726341 0.0 36 0.0 0.0 0.0 21.835476062604517 0.0 37 0.0 0.0 0.0 22.373682482392798 0.0 38 0.0 0.0 0.0 22.97564899116522 0.0 39 0.0 0.0 0.0 23.852891093695515 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAATC 20 7.0319226E-4 45.0 43 TCGAATT 20 7.0319226E-4 45.0 18 CCGTTAG 20 7.0319226E-4 45.0 1 GCGATCT 250 0.0 43.2 9 CGTTTTT 2715 0.0 42.928173 1 CGATCGA 155 0.0 42.096775 41 CCGATGA 945 0.0 41.90476 18 CGATGAA 945 0.0 41.42857 19 TCGATTG 60 3.6379788E-12 41.249996 1 TGGGCGA 970 0.0 40.12887 6 TACGGCT 630 0.0 40.0 7 ACGGGAC 90 0.0 40.0 5 TACGAAT 80 0.0 39.375 12 ATACGGA 40 3.4563527E-7 39.375 28 TGCGTTG 160 0.0 39.375 1 GGGCGAT 1555 0.0 39.35691 7 GGCGATT 805 0.0 39.130436 8 TTTCTCG 300 0.0 39.0 1 TTTCGCG 255 0.0 38.82353 1 TTTGGGA 5815 0.0 38.654343 4 >>END_MODULE