##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934043.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 127081 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.653520195780644 31.0 28.0 31.0 25.0 33.0 2 29.242955280490396 31.0 30.0 33.0 23.0 34.0 3 29.32723223770666 31.0 28.0 33.0 22.0 34.0 4 33.660397699105296 35.0 32.0 37.0 28.0 37.0 5 34.326130578135206 35.0 35.0 37.0 32.0 37.0 6 33.40796027730345 35.0 33.0 37.0 28.0 37.0 7 34.296149699797766 35.0 35.0 36.0 32.0 37.0 8 33.69105531117948 35.0 35.0 37.0 28.0 37.0 9 35.58937213273424 37.0 34.0 39.0 30.0 39.0 10 35.18573980374722 37.0 34.0 39.0 30.0 39.0 11 35.25561649656518 37.0 34.0 39.0 30.0 39.0 12 34.9648964046553 37.0 34.0 39.0 30.0 39.0 13 34.52768706572973 37.0 33.0 39.0 27.0 39.0 14 35.07691944507834 37.0 33.0 40.0 25.0 41.0 15 35.50648011897923 38.0 33.0 40.0 27.0 41.0 16 36.06682352200565 38.0 34.0 40.0 30.0 41.0 17 35.68959167774884 37.0 34.0 40.0 29.0 41.0 18 35.89805714465577 37.0 34.0 40.0 30.0 41.0 19 35.84092822687892 38.0 34.0 40.0 30.0 41.0 20 35.57842635799215 37.0 34.0 40.0 29.0 41.0 21 35.481094734854146 37.0 34.0 40.0 29.0 41.0 22 35.711302240303425 37.0 34.0 40.0 29.0 41.0 23 35.59706801174055 37.0 34.0 40.0 29.0 41.0 24 35.54029319882594 37.0 34.0 40.0 29.0 41.0 25 35.2877534800639 37.0 34.0 40.0 28.0 41.0 26 35.32518629850253 37.0 34.0 40.0 29.0 41.0 27 35.01653276256876 37.0 33.0 40.0 27.0 41.0 28 34.90181065619566 37.0 33.0 40.0 27.0 41.0 29 35.10974103131074 37.0 34.0 40.0 27.0 41.0 30 34.77169679180995 36.0 33.0 40.0 26.0 41.0 31 34.94439766762931 37.0 33.0 40.0 27.0 41.0 32 34.74383267364909 37.0 33.0 40.0 26.0 41.0 33 34.6499161951826 37.0 33.0 40.0 25.0 41.0 34 34.50644077399454 37.0 33.0 40.0 25.0 41.0 35 34.54453458817604 37.0 33.0 40.0 25.0 41.0 36 34.254625002950874 36.0 33.0 40.0 24.0 41.0 37 34.18632997851764 36.0 33.0 40.0 24.0 41.0 38 34.30505740433267 36.0 33.0 40.0 24.0 41.0 39 34.23894996104846 36.0 33.0 40.0 24.0 41.0 40 34.30172094963055 36.0 33.0 40.0 24.0 41.0 41 34.07059277153941 36.0 33.0 39.0 24.0 41.0 42 34.16687781808453 36.0 33.0 40.0 24.0 41.0 43 34.099944130121735 36.0 33.0 40.0 24.0 41.0 44 34.24180640693731 36.0 33.0 40.0 24.0 41.0 45 34.3116280167767 36.0 33.0 40.0 25.0 41.0 46 34.17824064966439 36.0 33.0 40.0 24.0 41.0 47 33.90231427199975 36.0 33.0 39.0 23.0 41.0 48 33.97372541922081 36.0 33.0 39.0 24.0 41.0 49 34.13048370724184 36.0 33.0 39.0 24.0 41.0 50 33.87247503560721 36.0 33.0 39.0 24.0 41.0 51 32.91366923458267 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 3.0 12 1.0 13 3.0 14 7.0 15 7.0 16 13.0 17 26.0 18 68.0 19 187.0 20 471.0 21 782.0 22 1147.0 23 1348.0 24 1602.0 25 1749.0 26 1914.0 27 2233.0 28 2759.0 29 3572.0 30 4621.0 31 6132.0 32 7493.0 33 9780.0 34 14264.0 35 12519.0 36 12779.0 37 15504.0 38 17800.0 39 8294.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.20072237391899 4.168207678567213 48.840503301044215 14.790566646469575 2 17.473894602654997 15.516088164241705 47.40991965754125 19.600097575562042 3 17.70524311266043 15.646713513428443 47.15653795610674 19.49150541780439 4 19.19720493228728 4.766251445928187 53.25343678441309 22.783106837371438 5 27.306993177579653 4.944877676442585 44.52121088124897 23.226918264728795 6 19.445078335864526 15.735633178838693 47.34618078233568 17.473107702961105 7 74.7397329262439 2.5204397195489494 18.689654629724348 4.0501727244828105 8 75.25515222574577 12.041926015690779 7.0569164548595 5.646005303703936 9 70.56365625073772 4.667888984191185 8.76212809153217 16.006326673538922 10 48.63905697940684 22.44159237022057 15.095883727701228 13.823466922671368 11 40.21686955563774 21.81285951479765 22.940486776150646 15.029784153413964 12 32.81056963668841 18.19076022379427 25.244529079878188 23.754141059639128 13 27.521816794013265 27.60286746248456 29.0964030814992 15.778912662002975 14 16.80345606345559 37.32580008026377 25.438893304270504 20.431850552010136 15 13.573232820012432 24.241231970160765 41.52469684689293 20.660838362933877 16 16.144034119970726 21.234488239784074 35.67488452246992 26.946593117775276 17 15.218640079949008 25.926771114486037 30.512822530512036 28.341766275052922 18 17.602946152453946 21.956075259086724 32.58158182576467 27.85939676269466 19 21.896270882350628 24.832193640276675 27.358928557376792 25.912606919995905 20 29.30257080129996 22.928683280742206 29.56146080059175 18.20728511736609 21 23.0482920342144 30.856697696744597 26.70029351358582 19.394716755455182 22 18.85332976605472 23.11675230758335 32.40689009371975 25.623027832642176 23 22.157521580724104 28.213501624947867 26.08651175234693 23.542465041981096 24 21.47291884703457 25.2626277728378 29.751890526514586 23.51256285361305 25 16.522532872734715 31.322542315531038 28.28825709586799 23.866667715866257 26 17.920066729094042 27.373092751866917 31.482282953391934 23.224557565647107 27 21.823089210818296 31.06443921593314 26.615308346645055 20.497163226603504 28 17.244906791731257 30.656825174495005 33.4455976896625 18.652670344111236 29 20.9921231340641 22.491953950629913 34.42686160795084 22.089061307355152 30 17.972789008585075 30.360950889590104 30.03753511539884 21.62872498642598 31 26.338319654393654 26.100675946837054 22.28106483266578 25.27993956610351 32 30.518330828369304 28.27015840290838 22.468346959813033 18.743163808909276 33 25.492402483455436 25.6175195347849 23.185212580952307 25.704865400807357 34 24.194017988527 27.164564332984476 23.985489569644557 24.655928108843966 35 22.875174101557274 25.75837457999229 27.201548618597588 24.16490269985285 36 26.488617495927798 26.436682116130655 25.13908452089612 21.935615867045428 37 22.853927809822082 25.870114336525525 30.375901983774128 20.90005586987827 38 22.475429057058097 26.458715307559743 22.84841951196481 28.21743612341735 39 23.11911300666504 30.129602379584675 24.84478403537901 21.906500578371276 40 20.95120434998151 26.279302177351454 25.28544786396078 27.48404560870626 41 17.316514663875797 26.713670808382055 25.298825158757015 30.670989368985136 42 23.307968933200087 25.77804707233969 26.354057648271574 24.55992634618865 43 24.800717652520834 23.132490301461274 23.493677260959544 28.57311478505835 44 21.35567079264406 25.06275525058821 30.059568306827927 23.522005649939803 45 21.02202532243215 26.916690929407228 24.699207592008246 27.362076156152376 46 25.5781745500901 29.5709035969185 24.72045388374344 20.13046796924796 47 18.77463979666512 27.561948678401965 30.307441710405175 23.35596981452774 48 22.21417835868462 25.614371936009316 27.635130349934293 24.536319355371774 49 22.148078784397356 21.56734681030209 32.39902109678079 23.885553308519764 50 20.827661098039833 25.04859105609808 26.772688285424255 27.35105956043783 51 18.99811930973159 26.6664568267483 25.619093334172693 28.716330529347424 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 18.0 1 44.5 2 71.0 3 137.5 4 204.0 5 172.0 6 140.0 7 149.5 8 159.0 9 184.0 10 209.0 11 255.0 12 301.0 13 305.0 14 309.0 15 290.5 16 272.0 17 242.0 18 212.0 19 270.5 20 329.0 21 466.5 22 604.0 23 578.0 24 552.0 25 521.5 26 784.0 27 1077.0 28 1266.0 29 1455.0 30 1548.0 31 1641.0 32 2084.0 33 2527.0 34 2806.5 35 3086.0 36 3454.5 37 3823.0 38 3881.0 39 3939.0 40 5015.5 41 6092.0 42 7538.0 43 8984.0 44 8882.5 45 8781.0 46 9165.0 47 9549.0 48 13869.0 49 18189.0 50 16202.0 51 14215.0 52 12679.0 53 11143.0 54 9363.5 55 7584.0 56 6825.0 57 6066.0 58 5283.5 59 4501.0 60 4089.0 61 3677.0 62 3132.5 63 2588.0 64 2052.0 65 1516.0 66 1336.0 67 1156.0 68 943.0 69 730.0 70 550.0 71 370.0 72 319.5 73 269.0 74 188.5 75 88.5 76 69.0 77 46.5 78 24.0 79 26.5 80 29.0 81 22.5 82 16.0 83 10.5 84 5.0 85 3.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 127081.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.92418221449312 #Duplication Level Percentage of deduplicated Percentage of total 1 76.35302600153216 26.6656699270544 2 9.080257762155828 6.342411532801914 3 3.035014194943896 3.179861663033813 4 1.5276463431120724 2.1340719698460036 5 0.8742282907485016 1.526585406158277 6 0.7593168401604254 1.5911111810577507 7 0.6421522238745437 1.569864889322558 8 0.5723040872425758 1.5989801779967105 9 0.5137217790996349 1.6147181718746313 >10 6.480104546888378 42.10936331945767 >50 0.10364562209904916 2.4889637317931084 >100 0.04731647965391375 3.5662294127367584 >500 0.004506331395610833 1.234645619722854 >1k 0.00675949709341625 4.377522997143554 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGC 2136 1.6808177461618965 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCG 2124 1.6713749498351445 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTC 1303 1.025330301146513 RNA PCR Primer, Index 34 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGCAACT 976 0.7680141012425147 No Hit GCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGC 593 0.4666315184803393 TruSeq Adapter, Index 18 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGGCAACTCGTA 480 0.37771185307008914 No Hit CCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGC 466 0.3666952573555449 RNA PCR Primer, Index 34 (96% over 25bp) GAATGATCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTC 394 0.3100384793950315 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCT 385 0.30295638214996734 No Hit CTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGCT 382 0.3005956830682793 RNA PCR Primer, Index 34 (96% over 26bp) TCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGC 338 0.26597209653685444 TruSeq Adapter, Index 18 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCT 298 0.23449610878101368 TruSeq Adapter, Index 3 (95% over 22bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGC 162 0.12747775041115508 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGCCACTCGTATGC 161 0.12669085071725908 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGCTCGAATGC 152 0.11960875347219489 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGGCAACTCGT 152 0.11960875347219489 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3454489656203524 0.0 2 0.0 0.0 0.0 1.6218002691196953 0.0 3 0.0 0.0 0.0 1.973544432291216 0.0 4 0.0 0.0 0.0 2.7801166185346355 0.0 5 0.0 0.0 0.0 4.777268041642732 0.0 6 0.0 0.0 0.0 5.3288847270638415 0.0 7 0.0 0.0 0.0 6.113423721878172 0.0 8 0.0 0.0 0.0 7.150557518433125 0.0 9 0.0 0.0 0.0 7.465317395991533 0.0 10 0.0 0.0 0.0 9.975527419519834 0.0 11 0.0 0.0 0.0 11.124400972608022 0.0 12 0.0 0.0 0.0 14.217703669313273 0.0 13 0.0 0.0 0.0 14.769320354734383 0.0 14 0.0 0.0 0.0 15.054964943618637 0.0 15 0.0 0.0 0.0 15.734059379450901 0.0 16 0.0 0.0 0.0 16.37538262997616 0.0 17 0.0 0.0 0.0 17.162282323872176 0.0 18 0.0 0.0 0.0 18.144333141854407 0.0 19 0.0 0.0 0.0 19.657541253216454 0.0 20 0.0 0.0 0.0 20.282339610169892 0.0 21 0.0 0.0 0.0 20.966155444165533 0.0 22 0.0 0.0 0.0 21.616134591323643 0.0 23 0.0 0.0 0.0 22.30073732501318 0.0 24 0.0 0.0 0.0 22.77759853951417 0.0 25 0.0 0.0 0.0 23.2064588726875 0.0 26 0.0 0.0 0.0 23.584957625451484 0.0 27 0.0 0.0 0.0 23.968177776378845 0.0 28 0.0 0.0 0.0 24.40805470526672 0.0 29 0.0 0.0 0.0 24.87232552466537 0.0 30 0.0 0.0 0.0 25.452270599066736 0.0 31 0.0 0.0 0.0 26.035363272243686 0.0 32 0.0 0.0 0.0 26.50514238949961 0.0 33 0.0 0.0 0.0 26.9615442119593 0.0 34 0.0 0.0 0.0 27.450995821562625 0.0 35 0.0 0.0 0.0 27.966415121064518 0.0 36 0.0 0.0 0.0 28.43068594046317 0.0 37 0.0 0.0 0.0 28.939023142719996 0.0 38 0.0 0.0 0.0 29.402507062424753 0.0 39 0.0 0.0 0.0 29.891171772334182 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCCGTG 35 1.2005512E-7 45.000004 39 CACCCGT 35 1.2005512E-7 45.000004 38 GTCATAC 40 6.73208E-9 45.0 39 TCGTTTG 40 6.73208E-9 45.0 1 GGGTGGA 20 7.009595E-4 45.0 7 CGGCGAA 25 3.8711798E-5 45.0 31 TCGCAAG 20 7.009595E-4 45.0 29 ACCGGGA 20 7.009595E-4 45.0 4 GTTCTAA 25 3.8711798E-5 45.0 20 AGTTTCG 20 7.009595E-4 45.0 1 AGTCAAC 20 7.009595E-4 45.0 19 AGGAGTA 20 7.009595E-4 45.0 36 CACGGGG 40 6.73208E-9 45.0 4 CCGATAT 20 7.009595E-4 45.0 19 TGGACCG 25 3.8711798E-5 45.0 19 ACCGCTC 40 6.73208E-9 45.0 39 TTTGTCG 40 6.73208E-9 45.0 1 ACCGCGG 25 3.8711798E-5 45.0 39 TTTCGCG 25 3.8711798E-5 45.0 1 GGGTAAT 20 7.009595E-4 45.0 7 >>END_MODULE