##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934042.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 427990 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.791861959391575 31.0 28.0 31.0 25.0 34.0 2 29.39653262926704 31.0 30.0 33.0 23.0 34.0 3 29.526168835720462 31.0 30.0 33.0 23.0 34.0 4 33.765936120002806 35.0 33.0 37.0 28.0 37.0 5 34.380174770438565 35.0 35.0 37.0 32.0 37.0 6 33.42371550737167 35.0 33.0 37.0 28.0 37.0 7 34.27460921984159 35.0 35.0 37.0 32.0 37.0 8 33.74237482184163 35.0 35.0 37.0 28.0 37.0 9 35.59695086333793 37.0 34.0 39.0 30.0 39.0 10 35.184581415453636 37.0 34.0 39.0 30.0 39.0 11 35.35533073202645 37.0 35.0 39.0 30.0 39.0 12 35.36995957849482 37.0 35.0 39.0 30.0 39.0 13 35.21732984415524 37.0 34.0 39.0 29.0 39.0 14 35.986389868922174 38.0 34.0 40.0 29.0 41.0 15 36.19024743568775 38.0 34.0 40.0 30.0 41.0 16 36.50775485408538 38.0 35.0 40.0 31.0 41.0 17 36.13725320685063 38.0 34.0 40.0 30.0 41.0 18 36.31837426108087 38.0 35.0 40.0 30.0 41.0 19 36.23210121731816 38.0 34.0 40.0 30.0 41.0 20 35.98324727213252 38.0 34.0 40.0 29.0 41.0 21 36.00961938363046 38.0 34.0 40.0 30.0 41.0 22 36.14166452487208 38.0 34.0 40.0 30.0 41.0 23 35.926837075632605 38.0 34.0 40.0 29.0 41.0 24 35.9202504731419 38.0 34.0 40.0 29.0 41.0 25 35.6945279095306 38.0 34.0 40.0 29.0 41.0 26 35.678868665155726 38.0 34.0 40.0 29.0 41.0 27 35.444437954157806 38.0 34.0 40.0 27.0 41.0 28 35.33277646673988 38.0 34.0 40.0 27.0 41.0 29 35.565634711091384 38.0 34.0 40.0 27.0 41.0 30 35.243601486016026 37.0 34.0 40.0 27.0 41.0 31 35.360697679852336 38.0 34.0 40.0 27.0 41.0 32 35.116255052688146 38.0 34.0 40.0 26.0 41.0 33 35.02461973410594 38.0 34.0 40.0 26.0 41.0 34 35.04052664781887 38.0 34.0 40.0 26.0 41.0 35 34.95549896025608 38.0 34.0 40.0 25.0 41.0 36 34.723369704899646 37.0 33.0 40.0 25.0 41.0 37 34.545629570784364 37.0 33.0 40.0 24.0 41.0 38 34.64394495198486 37.0 33.0 40.0 24.0 41.0 39 34.67429612841421 37.0 33.0 40.0 25.0 41.0 40 34.85370919881306 37.0 33.0 40.0 26.0 41.0 41 34.4296852730204 37.0 33.0 40.0 24.0 41.0 42 34.593044230005376 37.0 33.0 40.0 24.0 41.0 43 34.339617748078226 37.0 33.0 40.0 24.0 41.0 44 34.56497815369518 37.0 33.0 40.0 24.0 41.0 45 34.52059627561392 37.0 33.0 40.0 24.0 41.0 46 34.508385709946495 37.0 33.0 40.0 24.0 41.0 47 34.34210378747167 37.0 33.0 40.0 24.0 41.0 48 34.34935395686815 37.0 33.0 40.0 24.0 41.0 49 34.433234421364986 37.0 33.0 40.0 24.0 41.0 50 34.04149162363607 36.0 33.0 40.0 23.0 41.0 51 33.204694034907355 36.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 11.0 11 12.0 12 9.0 13 14.0 14 16.0 15 19.0 16 53.0 17 107.0 18 171.0 19 455.0 20 1094.0 21 2156.0 22 3740.0 23 4921.0 24 6065.0 25 6414.0 26 6380.0 27 6831.0 28 8233.0 29 10621.0 30 13650.0 31 17621.0 32 22084.0 33 28198.0 34 38372.0 35 40679.0 36 47530.0 37 58395.0 38 68745.0 39 35389.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.08159069137129 3.8685483305684714 48.3665506203416 15.68331035771864 2 17.375639617748078 14.613425547325873 49.062828570761 18.94810626416505 3 19.532465711815696 14.457814434916704 45.78611649804902 20.223603355218582 4 18.20579920091591 4.510853057314423 52.28510011916166 24.998247622608005 5 26.22047244094488 5.706208088974042 44.421832285801074 23.651487184280008 6 20.989509100679925 15.606205752470853 47.01184607116989 16.392439075679338 7 77.1742330428281 2.4675810182480897 16.570480618706043 3.7877053202177624 8 77.82892123647748 11.617327507652048 5.812752634407346 4.740998621463119 9 72.72810112385804 4.983994953153111 7.4303137923783265 14.857590130610529 10 45.40503282786981 22.91992803570177 15.616720016822825 16.0583191196056 11 35.23166429122176 22.68510946517442 22.461739760274774 19.62148648332905 12 26.142900535059233 19.433164326269306 27.458118180331315 26.96581695834015 13 26.757400873852195 22.21266852029253 30.79955139138765 20.23037921446763 14 19.518213042360802 30.56800392532536 27.166989882941188 22.74679314937265 15 15.819294843337461 22.966658099488306 36.07537559288768 25.13867146428655 16 18.245052454496598 22.603565503866914 29.982943526717914 29.16843851491857 17 19.444379541578076 26.48286174910629 29.46821187410921 24.60454683520643 18 19.515642888852543 21.950980163087923 29.92079254188182 28.612584406177717 19 22.33720414028365 24.253370405850603 26.880534591929717 26.528890861936027 20 28.05976775158298 23.39844388887591 29.555129792752165 18.986658566788943 21 24.605948737120027 29.90864272529732 25.391714759690647 20.093693777892007 22 22.148414682586044 21.854015280730856 30.739035958784083 25.258534077899014 23 25.780742540713568 25.818126591742796 26.036589639944857 22.364541227598774 24 21.84794037243861 26.759270076403652 27.573541437884064 23.819248113273677 25 19.6761606579593 31.16568144115517 26.449683403817847 22.708474497067687 26 19.446015093810605 25.0353980233183 31.476202715016704 24.04238416785439 27 23.947989439005585 26.963947755788688 26.33846585200589 22.74959695319984 28 16.94081637421435 30.213790041823408 30.565200121498165 22.280193462464077 29 19.548120283184186 23.382088366550622 31.373396574686325 25.696394775578867 30 18.71025023949158 31.650739503259423 27.1985326759971 22.4404775812519 31 21.911259608869365 27.04782822028552 23.273207317927987 27.767704852917124 32 27.057641533680695 27.873782097712564 23.809434799878503 21.25914156872824 33 24.759924297296664 25.07605317881259 24.375102222014533 25.78892030187621 34 21.947475408303934 26.448982452861046 24.045421622000514 27.558120516834506 35 24.786794083973927 25.424659454660155 25.424659454660155 24.363887006705763 36 20.914974648940397 29.178952779270546 25.735881679478496 24.17019089231057 37 19.62242108460478 30.874085843127176 26.689875931680646 22.813617140587397 38 20.755157830790438 27.811397462557537 23.922054253604056 27.51139045304797 39 20.088319820556556 32.169209560971055 25.13166195471857 22.610808663753826 40 21.53040958900909 24.262950068926845 25.705039837379378 28.50160050468469 41 19.081053295637748 27.015584476272807 25.471389518446692 28.43197270964275 42 24.817168625435173 24.07275870931564 26.547816537769574 24.562256127479614 43 20.23575317180308 27.22727166522582 26.400850487160916 26.136124675810184 44 20.910768943199606 26.444075796163464 28.78525199186897 23.85990326876796 45 20.597443865510876 26.5987523072969 25.540550012850765 27.26325381434146 46 23.466903432323186 29.2915722329961 25.21437416762074 22.02715016705998 47 18.426832402626232 28.398327063716444 30.07500175237739 23.099838781279935 48 20.501647234748475 27.792238136405057 26.772821794901752 24.933292833944716 49 22.282997266291268 23.486062758475665 30.82525292647024 23.40568704876282 50 22.187200635528868 26.08916096170471 27.19058856515339 24.533049837613028 51 20.109815649898362 24.825112736278886 26.831935325591722 28.23313628823103 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 44.0 1 184.5 2 325.0 3 530.0 4 735.0 5 570.0 6 405.0 7 407.0 8 409.0 9 471.0 10 533.0 11 518.5 12 504.0 13 477.5 14 451.0 15 514.5 16 578.0 17 596.5 18 615.0 19 812.5 20 1010.0 21 943.0 22 876.0 23 1194.0 24 1512.0 25 1989.5 26 2976.5 27 3486.0 28 3916.0 29 4346.0 30 5551.0 31 6756.0 32 7922.0 33 9088.0 34 9699.5 35 10311.0 36 11436.5 37 12562.0 38 14657.0 39 16752.0 40 17919.5 41 19087.0 42 21967.5 43 24848.0 44 37636.5 45 50425.0 46 45325.5 47 40226.0 48 39058.5 49 37891.0 50 35349.5 51 32808.0 52 31138.0 53 29468.0 54 27408.0 55 25348.0 56 23370.5 57 21393.0 58 20467.0 59 19541.0 60 17464.5 61 15388.0 62 13656.5 63 11925.0 64 10629.0 65 9333.0 66 7647.0 67 5961.0 68 5071.5 69 4182.0 70 3378.5 71 2575.0 72 2018.0 73 1461.0 74 1232.0 75 876.0 76 749.0 77 532.0 78 315.0 79 261.0 80 207.0 81 136.5 82 66.0 83 41.0 84 16.0 85 12.0 86 8.0 87 4.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 427990.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.578300069562545 #Duplication Level Percentage of deduplicated Percentage of total 1 74.52132200096199 22.042140237249466 2 9.105190249856904 5.386320988014454 3 3.139415227360242 2.7857569691344546 4 1.5158062111004318 1.7933988383694095 5 1.0529737696497394 1.5572587062039214 6 0.7610516394295578 1.3506368255687988 7 0.6090207753436591 1.260965946919867 8 0.5218723375176021 1.2348877277679728 9 0.5210650120343358 1.3870995553531622 >10 8.044497257042245 49.54575434540195 >50 0.15024491424699105 2.908685456559729 >100 0.04795050454691203 2.746290746388535 >500 0.003995875378909336 0.8743785049828879 >1k 0.003995875378909336 2.3137109507360116 >5k 0.0015983501515637343 2.8127142013493875 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGC 6657 1.5554101731348864 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCG 5242 1.2247949718451365 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTC 3672 0.8579639711208206 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAAACAGTT 2363 0.5521157036379355 No Hit GCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 1351 0.3156615808780579 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAAACAGTTCGTA 1335 0.3119231757751349 No Hit GAACTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCT 1067 0.24930489030117525 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTC 986 0.23037921446762774 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCT 879 0.2053786303418304 No Hit CCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 678 0.15841491623636067 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGCT 598 0.13972289072174585 Illumina Single End Adapter 1 (95% over 22bp) GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATCGAATGC 558 0.13037687796443842 No Hit TCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 485 0.11332040468235238 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCAAACAGTTCGT 432 0.10093693777892007 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 430 0.10046963714105471 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16005046846888946 0.0 2 0.0 0.0 0.0 0.8614687259048108 0.0 3 0.0 0.0 0.0 1.0577349938082665 0.0 4 0.0 0.0 0.0 1.6572817121895371 0.0 5 0.0 0.0 0.0 3.139792985817426 0.0 6 0.0 0.0 0.0 3.4241454239585036 0.0 7 0.0 0.0 0.0 3.9099044370195566 0.0 8 0.0 0.0 0.0 4.596836374681652 0.0 9 0.0 0.0 0.0 4.797308348325895 0.0 10 0.0 0.0 0.0 6.595247552512909 0.0 11 0.0 0.0 0.0 7.362321549568915 0.0 12 0.0 0.0 0.0 10.048365616019066 0.0 13 0.0 0.0 0.0 10.404682352391411 0.0 14 0.0 0.0 0.0 10.557956961611252 0.0 15 0.0 0.0 0.0 11.092548891329237 0.0 16 0.0 0.0 0.0 11.541157503679992 0.0 17 0.0 0.0 0.0 12.070609126381457 0.0 18 4.673006378653707E-4 0.0 0.0 12.629033388630576 0.0 19 4.673006378653707E-4 0.0 0.0 13.706161358910254 0.0 20 4.673006378653707E-4 0.0 0.0 14.190284819738778 0.0 21 4.673006378653707E-4 0.0 0.0 14.767401107502511 0.0 22 4.673006378653707E-4 0.0 0.0 15.37722843991682 0.0 23 4.673006378653707E-4 0.0 0.0 15.950139021939766 0.0 24 4.673006378653707E-4 0.0 0.0 16.455991962429028 0.0 25 4.673006378653707E-4 0.0 0.0 16.87819808874039 0.0 26 4.673006378653707E-4 0.0 0.0 17.244094488188978 0.0 27 4.673006378653707E-4 0.0 0.0 17.605785181896774 0.0 28 4.673006378653707E-4 0.0 0.0 18.007897380779927 0.0 29 4.673006378653707E-4 0.0 0.0 18.432673660599548 0.0 30 4.673006378653707E-4 0.0 0.0 18.975677001799106 0.0 31 4.673006378653707E-4 0.0 0.0 19.43176242435571 0.0 32 4.673006378653707E-4 0.0 0.0 19.86448281501904 0.0 33 4.673006378653707E-4 0.0 0.0 20.32103553821351 0.0 34 4.673006378653707E-4 0.0 0.0 20.755858781747236 0.0 35 4.673006378653707E-4 0.0 0.0 21.206570246968386 0.0 36 4.673006378653707E-4 0.0 0.0 21.665693123671115 0.0 37 4.673006378653707E-4 0.0 0.0 22.11009603028108 0.0 38 4.673006378653707E-4 0.0 0.0 22.5834715764387 0.0 39 4.673006378653707E-4 0.0 0.0 23.04983761302834 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACTCG 20 7.028318E-4 45.000004 32 CGGGTCG 20 7.028318E-4 45.000004 6 CGTATGA 30 2.1622964E-6 45.000004 45 TTTACCG 20 7.028318E-4 45.000004 1 TCGGGTA 30 2.1622964E-6 45.000004 5 AGGGTAC 30 2.1622964E-6 45.000004 6 AGCGATA 20 7.028318E-4 45.000004 34 CGAATGT 20 7.028318E-4 45.000004 45 TCATCGA 20 7.028318E-4 45.000004 16 TCGACAA 20 7.028318E-4 45.000004 19 CGGGTAT 50 2.1827873E-11 45.0 6 CGACGGA 25 3.8866878E-5 45.0 41 CCGATCG 330 0.0 45.0 40 ACCGCGT 45 3.8380676E-10 45.0 39 GTTAGCG 25 3.8866878E-5 45.0 1 TACGCCG 25 3.8866878E-5 45.0 29 CCGCGTA 45 3.8380676E-10 45.0 40 GCGTAAG 35 1.209537E-7 45.0 42 GATAGTA 25 3.8866878E-5 45.0 9 ATCGAAT 285 0.0 45.0 43 >>END_MODULE