##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934040.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1118079 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.08989078589259 31.0 30.0 31.0 26.0 34.0 2 30.355906872412415 31.0 30.0 33.0 27.0 34.0 3 30.38523038175299 31.0 30.0 34.0 26.0 34.0 4 34.05300967105187 35.0 33.0 37.0 30.0 37.0 5 34.44211097784682 35.0 35.0 37.0 32.0 37.0 6 33.944530753193646 35.0 35.0 37.0 30.0 37.0 7 34.34660073214862 35.0 35.0 37.0 32.0 37.0 8 34.52700658897985 35.0 35.0 37.0 32.0 37.0 9 35.90415435760801 37.0 35.0 39.0 31.0 39.0 10 35.27390551114903 37.0 34.0 39.0 30.0 39.0 11 35.42466856098719 37.0 35.0 39.0 30.0 39.0 12 35.51087534959515 37.0 35.0 39.0 30.0 39.0 13 35.5567746107386 37.0 35.0 39.0 30.0 39.0 14 36.34119950379177 38.0 35.0 40.0 30.0 41.0 15 36.58279871100343 38.0 35.0 40.0 31.0 41.0 16 36.70710477524397 38.0 35.0 40.0 31.0 41.0 17 36.42505851554318 38.0 35.0 40.0 30.0 41.0 18 36.536795700482706 38.0 35.0 40.0 30.0 41.0 19 36.54341508963141 38.0 35.0 40.0 30.0 41.0 20 36.56152382792271 38.0 35.0 40.0 30.0 41.0 21 36.24581089529452 38.0 35.0 40.0 30.0 41.0 22 36.40959449198134 38.0 35.0 40.0 30.0 41.0 23 36.44704354522355 38.0 35.0 40.0 30.0 41.0 24 36.37625606061826 38.0 35.0 40.0 30.0 41.0 25 35.893264250558325 38.0 34.0 40.0 29.0 41.0 26 36.01981344788695 38.0 34.0 40.0 30.0 41.0 27 36.04659420309299 38.0 34.0 40.0 30.0 41.0 28 35.923673550795606 38.0 34.0 40.0 29.0 41.0 29 36.06157972737168 38.0 34.0 40.0 30.0 41.0 30 35.59806865167846 38.0 34.0 40.0 28.0 41.0 31 35.79641420686731 38.0 34.0 40.0 29.0 41.0 32 35.798578633531264 38.0 34.0 40.0 29.0 41.0 33 35.804673015055286 38.0 34.0 40.0 29.0 41.0 34 35.7941344037407 38.0 34.0 40.0 29.0 41.0 35 35.782882962652906 38.0 34.0 40.0 29.0 41.0 36 35.580884713870844 38.0 34.0 40.0 28.0 41.0 37 35.6901667950118 38.0 34.0 40.0 29.0 41.0 38 35.59684065258358 38.0 34.0 40.0 28.0 41.0 39 35.49298305397025 38.0 34.0 40.0 28.0 41.0 40 35.49082578243577 38.0 34.0 40.0 28.0 41.0 41 35.33633312136262 38.0 34.0 40.0 27.0 41.0 42 35.49335869826729 38.0 34.0 40.0 28.0 41.0 43 35.47651015715348 38.0 34.0 40.0 28.0 41.0 44 35.4366864953192 38.0 34.0 40.0 28.0 41.0 45 35.487210653272264 38.0 34.0 40.0 28.0 41.0 46 35.39922939255634 38.0 34.0 40.0 28.0 41.0 47 35.33144527354507 37.0 34.0 40.0 28.0 41.0 48 35.27771651198171 37.0 34.0 40.0 28.0 41.0 49 35.27358531910536 37.0 34.0 40.0 28.0 41.0 50 35.09825602663139 37.0 34.0 40.0 27.0 41.0 51 33.988871984895525 36.0 32.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 11.0 11 14.0 12 22.0 13 30.0 14 41.0 15 63.0 16 144.0 17 300.0 18 524.0 19 989.0 20 1739.0 21 2841.0 22 4476.0 23 6303.0 24 8481.0 25 10879.0 26 13466.0 27 16462.0 28 20663.0 29 25656.0 30 32760.0 31 41851.0 32 53388.0 33 69794.0 34 94317.0 35 103485.0 36 126850.0 37 165089.0 38 206742.0 39 110692.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.18147554868663 4.4773222643480475 53.87186415271192 17.469338034253393 2 19.30436042533667 5.552738223327689 54.99870760473991 20.14419374659572 3 20.925891640930562 5.800484581143193 51.86431370234125 21.409310075585 4 19.379399845628082 5.08738649057893 48.347478129899585 27.1857355338934 5 19.80718714867196 5.899940880742774 50.09556569795157 24.197306272633686 6 22.02652943128348 7.916971877658019 52.23011969637208 17.826378994686422 7 85.3795662023882 2.383373625656148 8.746788017662437 3.490272154293212 8 87.80211416187944 4.047746178937266 4.943300070925221 3.206839588258075 9 82.58092675025647 5.035958997530586 6.486661497085626 5.896452755127321 10 41.33759779049602 27.598139308581953 15.625729487809 15.438533413113026 11 30.21566454606517 27.025281755582565 23.86817031712428 18.890883381227983 12 26.7680548512225 23.61443153837967 27.762170651626583 21.85534295877125 13 25.1387424323326 23.38358917393136 30.27889800273505 21.19877039100099 14 21.238570798664494 26.32971373221391 29.783315847985698 22.648399621135894 15 20.209305424750845 26.093952216256632 32.11839234973557 21.57835000925695 16 23.15632437421685 25.133286646113557 29.4549848445414 22.2554041351282 17 23.030572973823855 26.353862294167048 28.676596197585326 21.938968534423775 18 22.643391030508578 25.25796477708641 29.01610709082274 23.08253710158227 19 24.169937902420134 26.090285212404492 27.699652707903468 22.04012417727191 20 26.863486390496554 26.251722821017122 27.690619356950624 19.194171431535697 21 26.028572220746476 27.437685530271118 26.96660969394828 19.567132555034124 22 24.98186621875556 24.448719634301334 28.519183349298217 22.05023079764489 23 24.36983433192109 26.059070960102105 27.59250464412622 21.978590063850586 24 22.75733646728004 26.019807187148675 29.083991381646555 22.138864963924732 25 22.46084578996654 27.688920013702074 27.00694673632185 22.843287460009535 26 22.442421331587482 27.57059206013171 27.223478841834968 22.76350776644584 27 22.483921082499535 27.630695147659512 27.60592051187796 22.279463257962988 28 20.630205915682165 27.460224188094045 29.69405560787744 22.215514288346352 29 21.318887126938257 25.628600483507874 29.29721423978091 23.75529814977296 30 21.92769920551231 26.775925493636855 28.690727578283827 22.60564772256701 31 23.309175827468362 26.74506899780785 26.786926505193282 23.158828669530507 32 23.638401222096114 27.733013499046134 26.137956262482348 22.490629016375408 33 23.17385444141246 27.042275188068103 26.705536907499383 23.078333463020055 34 22.279016062371262 26.564938613461127 27.377403564506626 23.77864175966099 35 22.118293966705394 26.77046970741781 26.91652378767511 24.194712538201685 36 21.568064510647282 28.04703424355524 26.75714327878442 23.627757967013064 37 21.841569334546126 28.04828639121207 27.302632461570248 22.807511812671557 38 21.75248797267456 27.135560188501884 27.449849250366032 23.662102588457522 39 21.760537493325604 28.365884700454973 27.139316631472372 22.734261174747044 40 21.984045850069627 26.03930491494787 27.75778813482768 24.21886110015482 41 21.525133733841706 26.249129086585114 27.52479923153909 24.70093794803408 42 21.415213057395764 26.04601284882374 27.596708282688432 24.94206581109206 43 21.422815382455084 26.68272993232142 27.763780555756796 24.1306741294667 44 21.686392464217644 26.0680148719366 28.095241928343167 24.15035073550259 45 21.519499069385972 25.848978471109824 27.04433228779004 25.587190171714163 46 21.722078672437277 26.980383318173402 27.122859833696904 24.174678175692417 47 20.147145237501107 26.976626875202914 29.151428476878642 23.724799410417333 48 20.998963400618383 25.914000710146603 28.822560838724275 24.264475050510743 49 21.30180425533437 25.493368536570316 29.359642744385685 23.845184463709632 50 21.065148348193645 26.438203382766336 28.00446122322305 24.492187045816976 51 20.721165499038978 25.406433713539023 27.658421274346445 26.213979513075554 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 179.0 1 455.0 2 731.0 3 2008.0 4 3285.0 5 2468.5 6 1652.0 7 1601.0 8 1550.0 9 1590.5 10 1631.0 11 1658.5 12 1686.0 13 1684.5 14 1683.0 15 1742.0 16 1801.0 17 1901.5 18 2002.0 19 2228.5 20 2455.0 21 3104.5 22 3754.0 23 4349.0 24 4944.0 25 6085.5 26 9879.5 27 12532.0 28 14284.5 29 16037.0 30 19370.0 31 22703.0 32 25872.0 33 29041.0 34 32807.0 35 36573.0 36 38585.5 37 40598.0 38 45268.0 39 49938.0 40 53392.0 41 56846.0 42 61661.5 43 66477.0 44 69261.0 45 72045.0 46 74357.0 47 76669.0 48 85228.0 49 93787.0 50 92363.0 51 90939.0 52 88417.0 53 85895.0 54 79999.5 55 74104.0 56 68495.0 57 62886.0 58 58048.0 59 53210.0 60 48324.5 61 43439.0 62 38410.5 63 33382.0 64 28803.0 65 24224.0 66 19768.5 67 15313.0 68 12790.5 69 10268.0 70 8455.5 71 6643.0 72 5707.0 73 4771.0 74 3773.0 75 2073.5 76 1372.0 77 989.0 78 606.0 79 411.5 80 217.0 81 178.0 82 139.0 83 96.0 84 53.0 85 29.5 86 6.0 87 7.0 88 8.0 89 5.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1118079.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.21251071175226 #Duplication Level Percentage of deduplicated Percentage of total 1 74.16084786233263 21.66424562571022 2 8.111181955921717 4.738959795446696 3 2.673807803068294 2.3432591726489793 4 1.474609620808684 1.7230819737410648 5 1.0373712153794852 1.5152108870668337 6 0.8643410130791402 1.5149742661908712 7 0.7323794952738393 1.4976250695528321 8 0.6916167603954689 1.6163089617184025 9 0.6173219454490629 1.6230171549627446 >10 9.47236505525711 56.39125189066372 >50 0.13020465011577168 2.4126471680955595 >100 0.029903227525158033 1.4229738714182631 >500 0.002180443673527712 0.43249743000955193 >1k 0.0018689517201666101 1.1039467327742236 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC 3469 0.3102643015386211 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 2372 0.2121495887142143 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCG 2298 0.2055310939566882 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1672 0.14954220587275138 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTACGCAT 1178 0.10535928141034757 No Hit GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 1143 0.10222891226827442 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07477110293637569 0.0 2 0.0 0.0 0.0 0.3371854761604502 0.0 3 0.0 0.0 0.0 0.4486266176182542 0.0 4 0.0 0.0 0.0 0.7025442745995587 0.0 5 0.0 0.0 0.0 1.2466918706102164 0.0 6 0.0 0.0 0.0 1.5555251462553183 0.0 7 0.0 0.0 0.0 1.8291194092725112 0.0 8 0.0 0.0 0.0 2.2338314197833964 0.0 9 0.0 0.0 0.0 2.4107419958697016 0.0 10 0.0 0.0 0.0 2.9497915621346973 0.0 11 0.0 0.0 0.0 3.540358060566382 0.0 12 0.0 0.0 0.0 4.4889493497328905 0.0 13 0.0 0.0 0.0 4.718181810050989 0.0 14 0.0 0.0 0.0 4.807978684869316 0.0 15 0.0 0.0 0.0 4.994727563973566 0.0 16 0.0 0.0 0.0 5.247124755943005 0.0 17 8.9439118344947E-5 0.0 0.0 5.586993405653804 0.0 18 8.9439118344947E-5 0.0 0.0 5.94922183495084 0.0 19 8.9439118344947E-5 0.0 0.0 6.366008126438293 0.0 20 8.9439118344947E-5 0.0 0.0 6.708291632344405 0.0 21 8.9439118344947E-5 0.0 0.0 7.1785625166021365 0.0 22 8.9439118344947E-5 0.0 0.0 7.688812686760059 0.0 23 8.9439118344947E-5 0.0 0.0 8.172588877887877 0.0 24 8.9439118344947E-5 0.0 0.0 8.561827920925086 0.0 25 8.9439118344947E-5 0.0 0.0 8.929422697322819 0.0 26 8.9439118344947E-5 0.0 0.0 9.243890637423652 0.0 27 8.9439118344947E-5 0.0 0.0 9.556569795157587 0.0 28 8.9439118344947E-5 0.0 0.0 9.887583972152235 0.0 29 8.9439118344947E-5 0.0 0.0 10.257325287390247 0.0 30 8.9439118344947E-5 0.0 0.0 10.652467312238223 0.0 31 8.9439118344947E-5 0.0 0.0 11.035624495227976 0.0 32 8.9439118344947E-5 0.0 0.0 11.412431500815238 0.0 33 8.9439118344947E-5 0.0 0.0 11.791742801716158 0.0 34 8.9439118344947E-5 0.0 0.0 12.178924745031434 0.0 35 8.9439118344947E-5 0.0 0.0 12.589003102643016 0.0 36 8.9439118344947E-5 0.0 0.0 13.008114811207436 0.0 37 8.9439118344947E-5 0.0 0.0 13.418372047055708 0.0 38 8.9439118344947E-5 0.0 0.0 13.841240198590619 0.0 39 8.9439118344947E-5 0.0 0.0 14.272247309894919 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGG 20 7.0332026E-4 45.000004 2 CGATCAT 20 7.0332026E-4 45.000004 10 TATCGCG 20 7.0332026E-4 45.000004 1 CGCGCAT 45 1.9283107E-8 40.0 36 TACGCGC 45 1.9283107E-8 40.0 34 CGTCATA 40 3.458099E-7 39.375004 38 ACGGGTA 35 6.248136E-6 38.571426 5 TCGATAA 35 6.248136E-6 38.571426 20 TCGTACG 35 6.248136E-6 38.571426 29 CGATGAA 895 0.0 38.463684 19 CGTTTTT 1430 0.0 38.39161 1 TGGGCGA 1460 0.0 38.219177 6 TTTGGGC 2785 0.0 38.13286 4 TTTACGG 95 0.0 37.894737 2 TTTGTCG 345 0.0 37.826088 1 CCGATGA 920 0.0 37.66304 18 TATTGCG 30 1.1399022E-4 37.499996 1 TCGCGTA 30 1.1399022E-4 37.499996 12 TTTGGGA 5525 0.0 37.34389 4 TTGGGAC 2270 0.0 37.070484 5 >>END_MODULE