##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934039.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 629529 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.09490428558494 31.0 30.0 31.0 26.0 34.0 2 30.482556006156983 31.0 30.0 33.0 27.0 34.0 3 30.565338530869905 31.0 30.0 34.0 27.0 34.0 4 34.11287962905601 35.0 33.0 37.0 30.0 37.0 5 34.44386040992551 35.0 35.0 37.0 32.0 37.0 6 33.972114072584425 35.0 35.0 37.0 30.0 37.0 7 34.400583610921814 35.0 35.0 37.0 32.0 37.0 8 34.67528263193594 35.0 35.0 37.0 32.0 37.0 9 35.92850686783294 37.0 35.0 39.0 31.0 39.0 10 35.319661207029384 37.0 34.0 39.0 30.0 39.0 11 35.432094470628044 37.0 35.0 39.0 30.0 39.0 12 35.37041343607681 37.0 35.0 39.0 30.0 39.0 13 35.3308902369867 37.0 35.0 39.0 30.0 39.0 14 35.88007700995506 38.0 34.0 40.0 27.0 41.0 15 36.19635950051546 38.0 35.0 40.0 30.0 41.0 16 36.36489025922555 38.0 35.0 40.0 30.0 41.0 17 36.1880612330806 38.0 34.0 40.0 30.0 41.0 18 36.305199601606915 38.0 35.0 40.0 30.0 41.0 19 36.28875715018689 38.0 35.0 40.0 30.0 41.0 20 36.34117252739747 38.0 35.0 40.0 30.0 41.0 21 36.00737376673672 38.0 34.0 40.0 29.0 41.0 22 36.23273272557738 38.0 34.0 40.0 30.0 41.0 23 36.363678241987266 38.0 35.0 40.0 30.0 41.0 24 36.27215743833882 38.0 35.0 40.0 30.0 41.0 25 35.764905191023765 38.0 34.0 40.0 29.0 41.0 26 35.892607012544296 38.0 34.0 40.0 30.0 41.0 27 35.96352193465273 38.0 34.0 40.0 30.0 41.0 28 35.86393478298855 38.0 34.0 40.0 29.0 41.0 29 35.977978774607685 38.0 34.0 40.0 30.0 41.0 30 35.489853525413444 38.0 34.0 40.0 28.0 41.0 31 35.64332858375071 38.0 34.0 40.0 29.0 41.0 32 35.73146431697349 38.0 34.0 40.0 29.0 41.0 33 35.75575867037102 38.0 34.0 40.0 29.0 41.0 34 35.71343178789222 38.0 34.0 40.0 29.0 41.0 35 35.712288075688335 38.0 34.0 40.0 29.0 41.0 36 35.458210821105936 38.0 34.0 40.0 28.0 41.0 37 35.542713679592204 38.0 34.0 40.0 29.0 41.0 38 35.44902776520224 38.0 34.0 40.0 28.0 41.0 39 35.39886486563764 38.0 34.0 40.0 28.0 41.0 40 35.297519256459985 37.0 34.0 40.0 28.0 41.0 41 35.12865014955626 37.0 34.0 40.0 27.0 41.0 42 35.373042385656575 37.0 34.0 40.0 28.0 41.0 43 35.34452900501804 37.0 34.0 40.0 28.0 41.0 44 35.29104934006217 37.0 34.0 40.0 28.0 41.0 45 35.35151200341843 37.0 34.0 40.0 28.0 41.0 46 35.246855982806196 37.0 34.0 40.0 28.0 41.0 47 35.207258124724994 37.0 34.0 40.0 28.0 41.0 48 35.1536037259602 37.0 34.0 40.0 28.0 41.0 49 35.15118445695115 37.0 34.0 40.0 28.0 41.0 50 34.99384936992577 36.0 34.0 40.0 28.0 41.0 51 33.840363192164304 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 3.0 11 13.0 12 11.0 13 9.0 14 23.0 15 49.0 16 96.0 17 167.0 18 340.0 19 570.0 20 917.0 21 1384.0 22 2142.0 23 2892.0 24 4160.0 25 5608.0 26 7523.0 27 9549.0 28 12139.0 29 15462.0 30 19543.0 31 25394.0 32 32538.0 33 43111.0 34 58193.0 35 59470.0 36 71575.0 37 92313.0 38 110538.0 39 53793.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.890718298918713 4.7993023355556295 54.57191011057473 16.738069254950926 2 20.579512619752226 3.670045383135646 53.796727394607714 21.953714602504412 3 22.823253575292004 3.2913495645156936 51.93771851654173 21.94767834365057 4 20.864328728303224 5.092696285635769 45.7788282986169 28.264146687444104 5 18.985781433420858 5.9507981363845035 49.3327551232747 25.730665306919935 6 23.13380320843043 6.503115821511003 51.67037578888344 18.692705181175132 7 85.76824896073096 2.6615136077924926 7.636661694695558 3.93357573678099 8 87.5336958265624 2.516643395300296 5.702199580956557 4.247461197180749 9 81.40323956481751 5.526194980691914 7.995660247581922 5.0749052069086575 10 42.58390002684547 26.744280247613695 15.259662382511369 15.41215734302947 11 32.224250193398554 24.636196267368142 23.89484837076608 19.24470516846722 12 29.108428682395886 22.26712351615255 28.61917401740031 20.00527378405125 13 26.104119111272077 23.7004172961055 30.005607366777387 20.189856225845038 14 20.695948876064485 24.681944755523574 33.08854715191834 21.5335592164936 15 18.94829308896016 23.766816143497756 35.48255918313533 21.802331584406755 16 24.98026302203711 23.17780435849659 30.106794127037833 21.735138492428465 17 24.73833612113183 23.444035143734443 27.417640807651434 24.399987927482293 18 26.428012053455834 22.666151996174918 29.287927958839067 21.617907991530174 19 26.104595658023698 24.442559437293596 27.185244841778538 22.267600062904172 20 26.762865570926834 26.86246384201522 26.952531178071226 19.42213940898672 21 26.834982979338523 25.036813236562573 28.476368840831796 19.65183494326711 22 25.262537547912807 22.80911602166064 29.439787523688345 22.488558906738213 23 23.854659594712874 24.318339584038227 28.959428398056325 22.867572423192577 24 23.698828806933435 24.993924028916854 28.6889086920539 22.618338472095807 25 24.148530091544632 25.75179221290838 26.42261119027082 23.677066505276166 26 22.583232861393203 26.629114782639085 25.77593724832375 25.011715107643965 27 21.83918453319863 25.55132487939396 29.62881773516391 22.980672852243504 28 19.79384587524959 26.14700831891779 29.269342635525923 24.78980317030669 29 21.847285827976155 26.05392285343487 28.591852003640817 23.506939314948163 30 23.1855879554397 25.30765064039941 29.61420363478092 21.892557769379962 31 24.254482319321273 26.27170471892478 28.057166548324226 21.416646413429724 32 25.456015529070147 26.032954796363633 26.456446009635776 22.054583664930448 33 24.52611396774414 26.123498679171252 26.464229606578886 22.88615774650572 34 21.650313170640274 24.757715689031006 30.43894721291632 23.1530239274124 35 22.318590565327412 26.987795637691036 27.737244829070622 22.95636896791093 36 24.286887498431366 27.658138068301856 26.04089724222395 22.014077191042826 37 21.986755177283335 27.686095477730177 28.039693167431523 22.287456177554965 38 22.562105955404753 26.93426355259249 27.84208511442682 22.661545377575933 39 21.475102814961662 26.057417529613407 27.68847821148827 24.779001443936657 40 24.61157468520116 24.95151136802276 28.294645679547724 22.142268267228356 41 21.807891296508977 24.57837526150503 27.450204835678736 26.163528606307256 42 22.08857733321261 24.986140431973748 28.10577431698937 24.81950791782428 43 21.80264928224117 24.502763176914804 29.204055730554114 24.490531810289916 44 22.648837464199424 24.983122302546825 28.182021797248417 24.18601843600533 45 21.963563235371204 24.99265323757921 27.092318225212818 25.95146530183677 46 22.52429991310964 25.102576688286003 28.299887693815535 24.073235704788818 47 19.85484385945683 26.348428745935454 30.926295690905427 22.870431703702295 48 21.143585124751997 26.4494566572787 29.713801905869307 22.693156312099998 49 22.65693875897695 24.516583032711758 29.780359602178773 23.04611860613252 50 21.018253329076185 25.477460132893004 28.600429845169963 24.903856692860852 51 20.768383982310585 25.293195388933633 27.084216930435296 26.85420369832049 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 84.0 1 249.5 2 415.0 3 744.5 4 1074.0 5 850.0 6 626.0 7 644.5 8 663.0 9 691.5 10 720.0 11 755.5 12 791.0 13 840.5 14 890.0 15 864.0 16 838.0 17 834.0 18 830.0 19 991.5 20 1153.0 21 1553.0 22 1953.0 23 2230.0 24 2507.0 25 3244.0 26 4712.0 27 5443.0 28 7056.0 29 8669.0 30 9393.5 31 10118.0 32 12333.5 33 14549.0 34 16001.5 35 17454.0 36 18611.0 37 19768.0 38 22456.5 39 25145.0 40 28794.0 41 32443.0 42 35017.5 43 37592.0 44 41996.5 45 46401.0 46 50174.0 47 53947.0 48 54079.0 49 54211.0 50 49833.5 51 45456.0 52 42910.5 53 40365.0 54 39175.0 55 37985.0 56 37376.0 57 36767.0 58 35416.5 59 34066.0 60 30738.0 61 27410.0 62 24040.5 63 20671.0 64 17712.5 65 14754.0 66 12722.5 67 10691.0 68 8903.0 69 7115.0 70 6092.0 71 5069.0 72 4108.5 73 3148.0 74 2401.0 75 1445.0 76 1236.0 77 890.5 78 545.0 79 384.0 80 223.0 81 152.0 82 81.0 83 46.0 84 11.0 85 11.5 86 12.0 87 8.0 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 629529.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.30541180251297 #Duplication Level Percentage of deduplicated Percentage of total 1 73.75502185295971 23.82686353463207 2 9.401007567516148 6.074068416543 3 3.362463054561468 3.258772609450316 4 1.7058547993000988 2.2043336706673125 5 1.1227980693383843 1.8136227000521514 6 0.8016312557823532 1.5538216699088716 7 0.6626348171553721 1.4984683450021028 8 0.6346147155280503 1.6401191776854631 9 0.5371542562293822 1.5617690504066486 >10 7.854815948188544 50.77352437416024 >50 0.11714111048782996 2.5264576280442568 >100 0.042370188899760464 2.3940879314213297 >500 0.0014954184317562515 0.436884412318966 >1k 9.969456211708343E-4 0.43720647970733234 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1672 0.265595389569027 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 1043 0.16567942064622915 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 956 0.1518595648492762 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 909 0.1443936657405775 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 848 0.13470388179098977 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1825174058701029 0.0 2 0.0 0.0 0.0 0.8040932188985733 0.0 3 0.0 0.0 0.0 1.0746129249009975 0.0 4 0.0 0.0 0.0 1.4809484551148557 0.0 5 0.0 0.0 0.0 2.109037073748787 0.0 6 0.0 0.0 0.0 2.5015527481656923 0.0 7 0.0 0.0 0.0 2.870241085001644 0.0 8 0.0 0.0 0.0 3.486257185927892 0.0 9 0.0 0.0 0.0 3.780921927345682 0.0 10 0.0 0.0 0.0 4.298134001769577 0.0 11 0.0 0.0 0.0 5.394032681576226 0.0 12 0.0 0.0 0.0 6.304872372837471 0.0 13 0.0 0.0 0.0 6.638613947888024 0.0 14 0.0 0.0 0.0 6.759815671716474 0.0 15 0.0 0.0 0.0 6.946145451599529 0.0 16 0.0 0.0 0.0 7.372972492133007 0.0 17 0.0 0.0 0.0 7.993595211658239 0.0 18 0.0 0.0 0.0 8.69840785730284 0.0 19 0.0 0.0 0.0 9.18750367338121 0.0 20 0.0 0.0 0.0 9.73982135850771 0.0 21 0.0 0.0 0.0 10.457818464280438 0.0 22 0.0 0.0 0.0 11.243802906617487 0.0 23 0.0 0.0 0.0 11.967836271244057 0.0 24 0.0 0.0 0.0 12.527619855479255 0.0 25 0.0 0.0 0.0 13.058492936782896 0.0 26 0.0 0.0 0.0 13.539646307000949 0.0 27 0.0 0.0 0.0 14.056699532507636 0.0 28 0.0 0.0 0.0 14.548495780178515 0.0 29 0.0 0.0 0.0 15.120510731038602 0.0 30 0.0 0.0 0.0 15.810709276300217 0.0 31 0.0 0.0 0.0 16.351272141553448 0.0 32 0.0 0.0 0.0 16.875632417251627 0.0 33 0.0 0.0 0.0 17.432080174225494 0.0 34 0.0 0.0 0.0 17.996629225976882 0.0 35 0.0 0.0 0.0 18.67666144053729 0.0 36 0.0 0.0 0.0 19.229137974580997 0.0 37 0.0 0.0 0.0 19.817355514996134 0.0 38 0.0 0.0 0.0 20.504218232996415 0.0 39 0.0 0.0 0.0 21.529905691397854 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACACT 30 2.1639316E-6 45.000004 12 GTCGCAC 20 7.0308533E-4 45.0 24 AACGGTC 20 7.0308533E-4 45.0 15 ACGGATA 20 7.0308533E-4 45.0 29 AGCTACG 50 2.1827873E-11 45.0 9 CGATAGG 25 3.8887883E-5 45.0 10 CGTTTGG 340 0.0 41.02941 2 CTTACGG 50 1.0804797E-9 40.5 2 ACATACG 140 0.0 40.178574 17 GCGATAT 45 1.925946E-8 40.0 9 GTTTGCG 130 0.0 39.807693 1 GCGATAG 40 3.4548975E-7 39.375 9 TCATCGA 40 3.4548975E-7 39.375 16 GGGCGAT 1390 0.0 39.01079 7 GCGACTA 35 6.2437866E-6 38.57143 20 GCGACAC 35 6.2437866E-6 38.57143 11 GGGTACG 70 0.0 38.57143 7 CGCGCAA 35 6.2437866E-6 38.57143 16 TGGGCGA 1030 0.0 38.4466 6 CACGACC 100 0.0 38.25 27 >>END_MODULE