##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934038.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 390716 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.020884734692206 31.0 30.0 31.0 26.0 34.0 2 30.426199592542922 31.0 30.0 33.0 27.0 34.0 3 30.418329425976925 31.0 30.0 34.0 26.0 34.0 4 34.054231206298184 35.0 33.0 37.0 30.0 37.0 5 34.44922654818333 35.0 35.0 37.0 32.0 37.0 6 34.05429263198845 35.0 35.0 37.0 30.0 37.0 7 34.47214089005825 35.0 35.0 37.0 32.0 37.0 8 34.63116432395909 35.0 35.0 37.0 32.0 37.0 9 35.877842217876925 37.0 35.0 39.0 30.0 39.0 10 35.29750253380973 37.0 34.0 39.0 30.0 39.0 11 35.45913911895085 37.0 35.0 39.0 30.0 39.0 12 35.40941758208008 37.0 35.0 39.0 30.0 39.0 13 35.35513774711043 37.0 35.0 39.0 30.0 39.0 14 36.032102601377986 38.0 34.0 40.0 29.0 41.0 15 36.326469865580115 38.0 35.0 40.0 30.0 41.0 16 36.44544886823166 38.0 35.0 40.0 31.0 41.0 17 36.24858209031624 38.0 35.0 40.0 30.0 41.0 18 36.346550947491274 38.0 35.0 40.0 30.0 41.0 19 36.36220170149162 38.0 35.0 40.0 30.0 41.0 20 36.45486747407324 38.0 35.0 40.0 30.0 41.0 21 36.120737313035555 38.0 34.0 40.0 30.0 41.0 22 36.29100676706354 38.0 34.0 40.0 30.0 41.0 23 36.424625559229725 38.0 35.0 40.0 30.0 41.0 24 36.316526581967466 38.0 35.0 40.0 30.0 41.0 25 35.84570634425005 38.0 34.0 40.0 29.0 41.0 26 35.92337401079045 38.0 34.0 40.0 30.0 41.0 27 35.995029637895556 38.0 34.0 40.0 30.0 41.0 28 35.87323017229906 38.0 34.0 40.0 29.0 41.0 29 36.02144780351969 38.0 34.0 40.0 30.0 41.0 30 35.51483942300801 38.0 34.0 40.0 28.0 41.0 31 35.66280623266004 38.0 34.0 40.0 29.0 41.0 32 35.77256114415586 38.0 34.0 40.0 29.0 41.0 33 35.78286530369885 38.0 34.0 40.0 29.0 41.0 34 35.74124172032883 38.0 34.0 40.0 29.0 41.0 35 35.81582786474063 38.0 34.0 40.0 29.0 41.0 36 35.60364561471759 38.0 34.0 40.0 29.0 41.0 37 35.704289048823185 38.0 34.0 40.0 29.0 41.0 38 35.58667932718394 38.0 34.0 40.0 29.0 41.0 39 35.54753324665486 38.0 34.0 40.0 29.0 41.0 40 35.42689063155847 38.0 34.0 40.0 28.0 41.0 41 35.3350745810256 37.0 34.0 40.0 28.0 41.0 42 35.60719806713828 38.0 34.0 40.0 29.0 41.0 43 35.57406914485202 38.0 34.0 40.0 29.0 41.0 44 35.464506188638296 37.0 34.0 40.0 29.0 41.0 45 35.54472814013248 37.0 34.0 40.0 29.0 41.0 46 35.4188336285179 37.0 34.0 40.0 29.0 41.0 47 35.40471083856305 37.0 34.0 40.0 29.0 41.0 48 35.41012909632572 37.0 34.0 40.0 29.0 41.0 49 35.417991584680436 37.0 34.0 40.0 28.0 41.0 50 35.24094994830004 37.0 34.0 40.0 28.0 41.0 51 34.09894654941185 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 3.0 13 9.0 14 14.0 15 21.0 16 46.0 17 87.0 18 125.0 19 241.0 20 431.0 21 711.0 22 1072.0 23 1584.0 24 2277.0 25 3209.0 26 4316.0 27 5494.0 28 7099.0 29 9482.0 30 11888.0 31 15382.0 32 20023.0 33 26400.0 34 37508.0 35 38221.0 36 45247.0 37 58411.0 38 69306.0 39 32104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.541354845975082 4.73720042178974 53.05260086610223 17.668843866132946 2 19.969491907165306 3.6617389612915776 53.97680156430758 22.39196756723554 3 22.300596852957135 3.8849189692769173 51.843282588888094 21.971201588877857 4 20.787477349276713 5.50553343093193 45.49519343973628 28.211795780055077 5 17.87666745155049 6.215767974692615 49.22091749506035 26.686647078696545 6 22.316977037029453 5.899425669795964 52.676112572815036 19.107484720359544 7 83.6489931305603 2.7273006480410324 9.119667482263331 4.504038739135331 8 84.53377901084164 2.9614860921999613 6.8894030446667145 5.61533185229169 9 77.70170661042803 6.248016462084992 9.985257834334913 6.06501909315206 10 39.08286325617584 28.639216208192142 17.135208181901945 15.142712353730076 11 31.648051269976147 25.117988513395918 24.99616089435805 18.237799322269886 12 29.641478721117124 21.6855721291168 29.389633391005233 19.28331575876084 13 24.23217887161007 24.09473888962827 30.321512300494476 21.351569938267183 14 19.285107341393747 27.28964260485877 30.52959182628815 22.895658227459332 15 18.088586082986108 25.24723840334156 36.13673358654368 20.527441927128656 16 21.4874742779922 24.255725386214028 32.89396902097687 21.362831314816898 17 21.1289018110341 24.32585304927364 28.666089947685787 25.87915519200647 18 22.01906243921416 24.55056869951576 30.48429037971314 22.946078481556935 19 23.746148097339244 26.12972082023772 28.674024099345818 21.450106983077223 20 27.462146418370377 25.739155806263376 28.677863204987762 18.120834570378484 21 25.90782051413303 25.717400874292323 27.973259349501937 20.401519262072707 22 21.98962929595921 25.323508635428286 28.40886986967516 24.277992198937334 23 22.494343717687528 25.499083733453453 28.808392796814054 23.198179752044965 24 23.860809385845474 23.279824732030427 29.796322648675766 23.063043233448337 25 21.711166166729797 25.169944409750304 27.49874589215696 25.62014353136293 26 19.509055170507477 28.996508973269584 27.498234011404705 23.99620184481823 27 20.215450608626213 27.8593658821241 28.458266362268247 23.46691714698144 28 17.814729880527032 28.925101608329324 30.019246716284975 23.24092179485867 29 20.02016810163904 26.74141831918836 28.2051413302757 25.0332722488969 30 20.225688223671415 27.49951371328535 28.65380480963155 23.620993253411683 31 21.47058221316762 29.828059255315882 25.56460446974273 23.13675406177377 32 22.485385804522977 28.460057944901155 25.061681630647325 23.992874619928543 33 22.255295406382128 27.66536307701758 26.54741551408184 23.531926002518453 34 19.191177223354046 27.918744049386255 28.39120998372219 24.498868743537507 35 18.230632991738243 27.565034449574625 26.963318625293052 27.241013933394076 36 19.768578711903277 29.837784989608824 27.07849179455154 23.315144503936363 37 20.215962489378477 29.277787446636435 26.949753785358162 23.55649627862693 38 18.96287840784611 29.671423745124336 25.60350740691448 25.762190440115067 39 20.775192211222475 27.073628927405068 28.039547906919605 24.11163095445285 40 21.399686728979617 27.244853039036027 27.627995782102598 23.727464449881754 41 17.265737773728233 28.028542470746014 27.831468381125934 26.874251374399822 42 19.9549033057259 25.814914157597848 27.77234615423991 26.457836382436344 43 20.399727679439795 25.558461900715606 28.058231554377095 25.9835788654675 44 19.599914004033618 26.497763081112623 27.387411828540426 26.51491108631333 45 20.58656415401468 26.914689953828358 24.70694826933118 27.791797622825786 46 19.881960298528856 28.034429099397006 26.80437965171634 25.279230950357807 47 17.04358152724741 27.955599463548968 29.345099765558615 25.655719243645002 48 18.011548029770985 25.687967731037375 29.757675651880138 26.5428085873115 49 19.456331453024703 24.99078614645932 30.593065039568383 24.959817360947596 50 19.023792217365042 25.713817709026504 28.091247862897863 27.17114221071059 51 17.122667103471574 26.037326344454797 26.985585438016358 29.854421114057267 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 63.0 1 204.5 2 346.0 3 540.5 4 735.0 5 609.5 6 484.0 7 511.5 8 539.0 9 600.5 10 662.0 11 670.5 12 679.0 13 717.0 14 755.0 15 784.5 16 814.0 17 780.0 18 746.0 19 864.5 20 983.0 21 1325.5 22 1668.0 23 1804.0 24 1940.0 25 2053.0 26 2813.0 27 3460.0 28 4283.0 29 5106.0 30 5796.0 31 6486.0 32 7437.5 33 8389.0 34 9497.0 35 10605.0 36 12122.0 37 13639.0 38 14967.0 39 16295.0 40 17947.5 41 19600.0 42 22393.5 43 25187.0 44 29603.5 45 34020.0 46 37743.0 47 41466.0 48 40533.0 49 39600.0 50 34821.5 51 30043.0 52 26828.0 53 23613.0 54 21374.0 55 19135.0 56 18961.5 57 18788.0 58 18367.0 59 17946.0 60 16355.0 61 14764.0 62 13119.5 63 11475.0 64 9419.5 65 7364.0 66 5828.5 67 4293.0 68 3539.0 69 2785.0 70 2142.5 71 1500.0 72 1306.0 73 1112.0 74 889.0 75 523.0 76 380.0 77 290.0 78 200.0 79 167.0 80 134.0 81 99.5 82 65.0 83 37.5 84 10.0 85 8.5 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 390716.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.17626746749447 #Duplication Level Percentage of deduplicated Percentage of total 1 73.20219925668641 27.21384538775399 2 10.460542507051692 7.777678521944977 3 3.7504034980896765 4.18278010668026 4 1.8687497981520678 2.778925693037103 5 1.165660492055658 2.1667453114476176 6 0.9321679021393044 2.0792713952726394 7 0.7851466117419617 2.043217430752134 8 0.6876533413703618 2.045150763496068 9 0.6526073060319141 2.1835353384255107 >10 6.358386104618097 41.51209475500489 >50 0.09888067271897114 2.4665538448519486 >100 0.03481713828132786 2.0792779682882925 >500 0.0 0.0 >1k 0.002785371062506229 1.4709234830445814 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 1651 0.4225575609905916 No Hit GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 1400 0.35831652658196744 No Hit TCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 1355 0.34679920965611855 No Hit CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGCT 1276 0.32657991994185037 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3621556322239171 0.0 2 0.0 0.0 0.0 1.6426253340021908 0.0 3 0.0 0.0 0.0 2.1207219566129876 0.0 4 0.0 0.0 0.0 2.881888635223538 0.0 5 0.0 0.0 0.0 4.07329108610858 0.0 6 0.0 0.0 0.0 4.701112828755413 0.0 7 0.0 0.0 0.0 5.300269249275689 0.0 8 0.0 0.0 0.0 6.295365431669039 0.0 9 0.0 0.0 0.0 6.739677924630678 0.0 10 0.0 0.0 0.0 7.615249951371329 0.0 11 0.0 0.0 0.0 9.25019707408962 0.0 12 0.0 0.0 0.0 10.752311141596454 0.0 13 0.0 0.0 0.0 11.273149807020957 0.0 14 0.0 0.0 0.0 11.45563529520163 0.0 15 0.0 0.0 0.0 11.759436521667912 0.0 16 0.0 0.0 0.0 12.461736913768569 0.0 17 0.0 0.0 0.0 13.479355849261356 0.0 18 0.0 0.0 0.0 14.621361807553312 0.0 19 0.0 0.0 0.0 15.350024058395356 0.0 20 0.0 0.0 0.0 16.142927343646026 0.0 21 0.0 0.0 0.0 17.222227909786135 0.0 22 0.0 0.0 0.0 18.27951760357907 0.0 23 0.0 0.0 0.0 19.28510734139375 0.0 24 0.0 0.0 0.0 20.04601807962817 0.0 25 0.0 0.0 0.0 20.751389756242386 0.0 26 0.0 0.0 0.0 21.387145650549247 0.0 27 0.0 0.0 0.0 21.978111979033365 0.0 28 0.0 0.0 0.0 22.655586154649413 0.0 29 0.0 0.0 0.0 23.34995239509004 0.0 30 0.0 0.0 0.0 24.175871988861473 0.0 31 0.0 0.0 0.0 24.948044103645614 0.0 32 0.0 0.0 0.0 25.637547476939773 0.0 33 0.0 0.0 0.0 26.32014046007842 0.0 34 0.0 0.0 0.0 26.99582305306156 0.0 35 0.0 0.0 0.0 27.712712046601624 0.0 36 0.0 0.0 0.0 28.41014957155581 0.0 37 0.0 0.0 0.0 29.096837600712536 0.0 38 0.0 0.0 0.0 29.810399369362912 0.0 39 0.0 0.0 0.0 30.540597262461738 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCT 25 3.886063E-5 45.0 6 CAAACGG 25 3.886063E-5 45.0 35 CACGGTC 20 7.027566E-4 45.0 45 GTCGTTT 20 7.027566E-4 45.0 9 GACGGGT 20 7.027566E-4 45.0 4 TTTATCG 20 7.027566E-4 45.0 1 CCAACGG 20 7.027566E-4 45.0 7 CGCAAGA 20 7.027566E-4 45.0 23 TCGACGT 20 7.027566E-4 45.0 26 ATCGCAA 20 7.027566E-4 45.0 21 TTACACG 135 0.0 43.333336 34 CGTTTGG 270 0.0 42.500004 2 CGAGATA 175 0.0 42.42857 19 GCGATTC 80 0.0 42.1875 9 TCCCGCT 60 3.6379788E-12 41.250004 14 GCCGATT 55 6.002665E-11 40.909092 9 TGGGCGA 485 0.0 40.36082 6 ACACGCG 140 0.0 40.17857 36 CACGCGG 140 0.0 40.17857 37 GGCCGAT 90 0.0 40.0 8 >>END_MODULE