##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934037.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 131862 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.973100665847628 31.0 30.0 31.0 26.0 34.0 2 30.317369674356524 31.0 30.0 33.0 27.0 34.0 3 30.328783121748494 31.0 30.0 34.0 26.0 34.0 4 34.018542112208216 35.0 33.0 37.0 30.0 37.0 5 34.41778526034794 35.0 35.0 37.0 32.0 37.0 6 33.89727897347227 35.0 35.0 37.0 30.0 37.0 7 34.42693876931944 35.0 35.0 37.0 32.0 37.0 8 34.52997072697214 35.0 35.0 37.0 32.0 37.0 9 35.76928910527673 37.0 35.0 39.0 30.0 39.0 10 35.31435136733858 37.0 34.0 39.0 30.0 39.0 11 35.47257739151537 37.0 35.0 39.0 30.0 39.0 12 35.22722998286087 37.0 34.0 39.0 30.0 39.0 13 34.88607028560161 37.0 33.0 39.0 27.0 39.0 14 35.449121050795526 38.0 33.0 40.0 27.0 41.0 15 35.96406849585173 38.0 34.0 40.0 30.0 41.0 16 36.17324172240676 38.0 34.0 40.0 30.0 41.0 17 36.08571081888641 38.0 34.0 40.0 30.0 41.0 18 36.20281809770821 38.0 35.0 40.0 30.0 41.0 19 36.15619359633556 38.0 34.0 40.0 30.0 41.0 20 36.25258982876037 38.0 34.0 40.0 30.0 41.0 21 35.89940240554519 38.0 34.0 40.0 29.0 41.0 22 36.07054344693695 38.0 34.0 40.0 30.0 41.0 23 36.22228541960534 38.0 34.0 40.0 30.0 41.0 24 36.107096813335154 38.0 34.0 40.0 30.0 41.0 25 35.62302255388209 37.0 34.0 40.0 29.0 41.0 26 35.66643915608743 38.0 34.0 40.0 29.0 41.0 27 35.698722907281855 38.0 34.0 40.0 29.0 41.0 28 35.62699640533285 38.0 34.0 40.0 29.0 41.0 29 35.78601871653699 38.0 34.0 40.0 30.0 41.0 30 35.40343692648375 37.0 34.0 40.0 29.0 41.0 31 35.43600885774522 37.0 34.0 40.0 29.0 41.0 32 35.49096024631812 37.0 34.0 40.0 29.0 41.0 33 35.5191184723423 37.0 34.0 40.0 29.0 41.0 34 35.541186998528765 37.0 34.0 40.0 29.0 41.0 35 35.65821844049081 38.0 34.0 40.0 30.0 41.0 36 35.38412886199208 37.0 34.0 40.0 29.0 41.0 37 35.37209355235019 37.0 34.0 40.0 29.0 41.0 38 35.263912271920645 37.0 34.0 40.0 29.0 41.0 39 35.272208824377 37.0 34.0 40.0 29.0 41.0 40 35.16872942925179 37.0 34.0 40.0 28.0 41.0 41 35.15611017578984 37.0 34.0 40.0 28.0 41.0 42 35.38799654183919 37.0 34.0 40.0 29.0 41.0 43 35.35569003958684 37.0 34.0 40.0 29.0 41.0 44 35.19206443099604 37.0 34.0 40.0 28.0 41.0 45 35.289401040481714 37.0 34.0 40.0 29.0 41.0 46 35.20143028317484 37.0 34.0 40.0 29.0 41.0 47 35.17813319986046 37.0 34.0 40.0 28.0 41.0 48 35.24757701233107 37.0 34.0 40.0 29.0 41.0 49 35.296180855743124 37.0 34.0 40.0 29.0 41.0 50 35.107263654426596 37.0 34.0 40.0 28.0 41.0 51 33.99162002699792 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 2.0 11 5.0 12 6.0 13 3.0 14 3.0 15 9.0 16 14.0 17 19.0 18 41.0 19 77.0 20 145.0 21 238.0 22 396.0 23 542.0 24 760.0 25 1100.0 26 1564.0 27 1942.0 28 2556.0 29 3299.0 30 4417.0 31 5561.0 32 7333.0 33 9620.0 34 14335.0 35 13306.0 36 14848.0 37 18762.0 38 21751.0 39 9205.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.300586977294444 4.554003427826061 54.07850631721042 19.066903277669077 2 19.429403467261228 4.153584808360256 53.42175911179869 22.99525261257982 3 20.275742822041227 4.145242753788051 54.03300420136203 21.546010222808697 4 20.460026391227192 5.087136551849661 47.3623940179885 27.09044303893464 5 17.760234184222902 5.984286602660357 50.12361408138811 26.131865131728627 6 20.367505422335473 6.685777555322988 52.37066023570096 20.576056786640578 7 80.98845762994647 2.7794209097389695 10.675554746629052 5.55656671368552 8 81.50414827622818 3.28828623864343 8.140328525276425 7.067236959851966 9 74.76300981328964 6.401389331270571 11.932171512642006 6.903429342797773 10 41.34625593423428 27.610683896801202 16.99807374376242 14.044986425202104 11 32.8548027483278 25.090625047398035 24.002366110024116 18.05220609425005 12 30.880769289105274 21.7348440035795 29.00608211615173 18.378304591163488 13 22.53340613671869 31.6755395792571 28.171118290333837 17.619935993690373 14 16.351943698715324 33.29086469187484 29.363273725561573 20.993917883848265 15 14.456780573630008 24.69475663951707 41.606376363167556 19.242086423685368 16 15.677754015561723 23.09763237323869 37.429282128285635 23.795331482913955 17 15.902231120413765 23.585263381413903 29.230559221003777 31.281946277168554 18 19.609136824862354 21.38523608014439 34.70825560055209 24.29737149444116 19 22.446952116606756 25.31813562663997 28.714868574722058 23.520043682031215 20 25.52668699094508 25.701870136961368 28.19917792844034 20.572264943653213 21 22.781392668092398 26.856865510912925 28.696667728382703 21.665074092611974 22 19.652363834918322 26.745385327084374 26.994130227055557 26.608120610941743 23 18.80374937434591 28.06722179248002 26.445829731082494 26.68319910209158 24 21.03638652530676 23.810498854863418 31.727867012482747 23.425247607347075 25 17.90659932353521 25.940756245165403 30.453807768727913 25.698836662571477 26 17.50769744126435 31.878023994782424 27.113952465456308 23.500326098496913 27 20.293185299783108 29.517980919446085 28.976505740850282 21.21232803992052 28 16.733403103244303 27.245908601416634 34.683229436835475 21.337458858503584 29 15.895405803036509 25.28552577694863 32.343662313630915 26.475406106383947 30 19.56135960322155 26.611912453929108 28.64282355796211 25.183904384887228 31 22.261151810225844 30.789765057408502 23.41008023539761 23.539002896968043 32 21.676449621574072 29.012907433528994 23.631523865859762 25.67911907903718 33 21.877417299904444 26.76889475360604 24.992037129726533 26.361650816762978 34 16.94726304773172 27.753257193126146 27.114710834053785 28.18476892508835 35 18.247865192398113 26.36316755395793 25.955165248517385 29.43380200512657 36 23.600430753363362 24.549149868802232 26.799229497504967 25.05118988032943 37 20.149095266263213 28.09679816778147 28.2848735799548 23.469232986000517 38 16.573387329177475 29.151688886866573 25.287042514143575 28.987881269812384 39 18.578513900896393 26.3639259225554 27.659219487039483 27.39834068950873 40 21.389786291729234 25.855060593650936 26.277471902443462 26.477681212176368 41 16.653016031912152 25.30069314889809 25.59797363910755 32.448317180082206 42 20.837693952768806 24.40202636089245 25.40079780376454 29.359481882574208 43 21.945670473677026 23.24172240675858 27.034323762721634 27.77828335684276 44 18.172028332650804 25.698836662571477 29.00911559054163 27.120019414236097 45 18.48826803779709 27.5515311461983 24.62195325415965 29.33824756184496 46 20.795225311310308 26.994888595653034 27.492378395595395 24.717507697441267 47 16.795589328237096 25.911179869863947 30.507651939148506 26.78557886275045 48 18.67558508137295 21.687066781938693 30.774597685459042 28.862750451229314 49 18.372237642383705 21.61047155359391 32.55373041513097 27.463560388891416 50 19.684215316012192 23.61938996830019 28.667091353081254 28.029303362606363 51 17.591876355583867 24.888140631872716 25.240782029697716 32.2792009828457 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 30.0 1 53.5 2 77.0 3 133.0 4 189.0 5 148.0 6 107.0 7 133.0 8 159.0 9 220.5 10 282.0 11 290.5 12 299.0 13 316.5 14 334.0 15 315.5 16 297.0 17 268.5 18 240.0 19 362.5 20 485.0 21 502.0 22 519.0 23 489.5 24 460.0 25 624.5 26 993.0 27 1197.0 28 1187.5 29 1178.0 30 1761.5 31 2345.0 32 2581.0 33 2817.0 34 2989.5 35 3162.0 36 3165.5 37 3169.0 38 4119.5 39 5070.0 40 6243.5 41 7417.0 42 8352.0 43 9287.0 44 9664.0 45 10041.0 46 10480.0 47 10919.0 48 12192.5 49 13466.0 50 14402.5 51 15339.0 52 14493.5 53 13648.0 54 10922.0 55 8196.0 56 6820.5 57 5445.0 58 4788.5 59 4132.0 60 3821.5 61 3511.0 62 3027.0 63 2543.0 64 2306.0 65 2069.0 66 1546.0 67 1023.0 68 809.5 69 596.0 70 516.0 71 436.0 72 381.5 73 327.0 74 249.5 75 114.5 76 57.0 77 40.0 78 23.0 79 13.5 80 4.0 81 3.0 82 2.0 83 1.5 84 1.0 85 1.0 86 1.0 87 1.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 131862.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.293170132411156 #Duplication Level Percentage of deduplicated Percentage of total 1 75.25252525252525 31.07415328146092 2 10.532598714416896 8.698487813016637 3 3.7043158861340677 4.588888383309824 4 1.7741046831955924 2.93033626063612 5 1.1294765840220387 2.331983437229831 6 0.8099173553719008 2.0066433089138647 7 0.7144168962350781 2.0650376909192945 8 0.5344352617079889 1.7654820949174137 9 0.5215794306703397 1.9383901351412842 >10 4.894398530762167 35.49392546753424 >50 0.08999081726354453 2.4290546177063903 >100 0.03489439853076217 2.095372434818219 >500 0.005509641873278237 1.707846081509457 >1k 0.0018365472910927456 0.8743989928865026 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 1153 0.8743989928865026 RNA PCR Primer, Index 16 (96% over 25bp) CTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGCT 880 0.667364365776342 RNA PCR Primer, Index 16 (96% over 26bp) TCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 686 0.5202408578665575 Illumina PCR Primer Index 7 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 686 0.5202408578665575 Illumina PCR Primer Index 7 (95% over 22bp) GCAGCTGGTACAATAATCAAGGAATTGTTTAAAACCAACTTATAAGTGAAT 235 0.17821662040618222 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 211 0.16001577406682743 No Hit TTTTCTGGGACAAATATTTTGAAAAATATGAATAAACATGAACTTTTAAAA 193 0.14636513931231135 No Hit CGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTG 185 0.14029819053252643 RNA PCR Primer, Index 16 (95% over 24bp) TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 164 0.124372449985591 No Hit TGGCCTGTCCTATTTTGTTTTGAGGGAGTCATTAACCTTACTGTCACTAAA 160 0.12133897559569855 No Hit TGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTG 157 0.11906386980327918 Illumina PCR Primer Index 7 (95% over 21bp) TGGCTTGGGGAAAAATAGCAAAGTATTTTGAGTACTTCAAAACATTTTCAT 151 0.1145136582184405 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 145 0.10996344663360179 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCC 142 0.10768834084118244 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7447179627185998 0.0 2 0.0 0.0 0.0 2.9439868953906356 0.0 3 0.0 0.0 0.0 3.698563649876386 0.0 4 0.0 0.0 0.0 4.669275454641975 0.0 5 0.0 0.0 0.0 6.164019960261485 0.0 6 0.0 0.0 0.0 7.05586143088987 0.0 7 0.0 0.0 0.0 7.899925679877447 0.0 8 0.0 0.0 0.0 9.349926438246046 0.0 9 0.0 0.0 0.0 10.023357752802172 0.0 10 0.0 0.0 0.0 11.229163822784425 0.0 11 0.0 0.0 0.0 13.432982967041301 0.0 12 0.0 0.0 0.0 15.463894071074305 0.0 13 0.0 0.0 0.0 16.14945928319 0.0 14 0.0 0.0 0.0 16.427022189865163 0.0 15 0.0 0.0 0.0 16.79938117122446 0.0 16 0.0 0.0 0.0 17.717765542764404 0.0 17 0.0 0.0 0.0 19.18672551606983 0.0 18 0.0 0.0 0.0 21.112223385054072 0.0 19 0.0 0.0 0.0 21.987380746538047 0.0 20 0.0 0.0 0.0 23.013453458919173 0.0 21 0.0 0.0 0.0 24.150247986531372 0.0 22 0.0 0.0 0.0 25.250640821464867 0.0 23 0.0 0.0 0.0 26.28353885122325 0.0 24 0.0 0.0 0.0 27.091201407532118 0.0 25 0.0 0.0 0.0 27.81468504952147 0.0 26 0.0 0.0 0.0 28.456264882983724 0.0 27 0.0 0.0 0.0 29.072060184131896 0.0 28 0.0 0.0 0.0 29.726532283751194 0.0 29 0.0 0.0 0.0 30.441673871168344 0.0 30 0.0 0.0 0.0 31.34413250216135 0.0 31 0.0 0.0 0.0 32.15558690145758 0.0 32 0.0 0.0 0.0 32.851769273937904 0.0 33 0.0 0.0 0.0 33.51306669093446 0.0 34 0.0 0.0 0.0 34.19787353445268 0.0 35 0.0 0.0 0.0 34.940316391378865 0.0 36 0.0 0.0 0.0 35.641807344041496 0.0 37 0.0 0.0 0.0 36.319788870182464 0.0 38 0.0 0.0 0.0 37.00307897650574 0.0 39 0.0 0.0 0.0 37.790265580682835 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAATCA 45 3.783498E-10 45.000004 13 CGGTTAA 60 0.0 45.000004 35 TCGGGCG 30 2.1508586E-6 45.000004 5 GTTAGGG 30 2.1508586E-6 45.000004 3 TACGGTT 60 0.0 45.000004 33 ATATGAA 45 3.783498E-10 45.000004 26 CCTAATA 30 2.1508586E-6 45.000004 16 ACCCTAA 30 2.1508586E-6 45.000004 14 AATATGA 45 3.783498E-10 45.000004 25 TCTAATT 30 2.1508586E-6 45.000004 11 CGGGCCC 30 2.1508586E-6 45.000004 6 GCCTCCG 45 3.783498E-10 45.000004 44 CTACATC 30 2.1508586E-6 45.000004 18 TGGTGTC 30 2.1508586E-6 45.000004 6 TTTCTCG 30 2.1508586E-6 45.000004 1 TATAAGT 45 3.783498E-10 45.000004 41 TGTTTAA 50 2.1827873E-11 45.0 26 GAGGATA 25 3.8719823E-5 45.0 9 ACCGGCG 20 7.0105644E-4 45.0 20 GATGTTG 25 3.8719823E-5 45.0 34 >>END_MODULE