SRR2934035.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934035.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	329244
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGC	3424	1.0399582072869968	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCG	2494	0.7574929231815918	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTC	1756	0.5333430525689155	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAACGGAAT	1336	0.4057780855535712	No Hit
GCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC	1016	0.30858572973235654	No Hit
CCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC	1003	0.3046372902771197	No Hit
CTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGCT	702	0.2132157305827897	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAACGGAATCGTA	667	0.2025853166648443	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTC	513	0.15581149542588474	No Hit
TCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC	489	0.14852206873929366	No Hit
GAACTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCT	481	0.14609225984376328	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCT	447	0.13576557203775924	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	438	0.13303203703028757	No Hit
GCGCTCGGGAGAAACAAGCGAGATAGGAATGTCTTACACGCGGGGCAAGAC	339	0.10296315194809928	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAT	20	7.025944E-4	45.000004	6
CGGGTAC	20	7.025944E-4	45.000004	6
ACTTCGG	20	7.025944E-4	45.000004	44
TTATCCG	20	7.025944E-4	45.000004	1
ACGGCAG	20	7.025944E-4	45.000004	28
ACACTGC	20	7.025944E-4	45.000004	35
ACCCCGA	20	7.025944E-4	45.000004	37
GGTTAAC	20	7.025944E-4	45.000004	8
CCCGAAC	20	7.025944E-4	45.000004	40
CCGATCG	95	0.0	45.0	40
AGGAACG	25	3.8847225E-5	45.0	43
CCTCGTC	50	2.1827873E-11	45.0	36
CTACGGG	25	3.8847225E-5	45.0	3
CGATCGA	100	0.0	45.0	41
ACACGTG	30	2.1607666E-6	44.999996	42
AAACACG	30	2.1607666E-6	44.999996	40
GCATATC	30	2.1607666E-6	44.999996	28
TTTCGCG	130	0.0	43.26923	1
TGTTTCG	70	0.0	41.785717	1
TCCTAAC	70	0.0	41.785717	26