SRR2934032.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934032.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	504931
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	890	0.176261707045121	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCT	684	0.1354640535043402	Illumina Single End Adapter 1 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	630	0.12476952296452387	No Hit
TCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	586	0.11605546104319203	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTAG	25	3.8876875E-5	45.0	1
ACCGGTA	30	2.163075E-6	44.999996	41
TTGACGA	30	2.163075E-6	44.999996	14
TTGTTCG	75	0.0	42.0	1
CGGGACG	55	6.002665E-11	40.909092	6
CGCGGGT	50	1.0786607E-9	40.5	4
ACGGGAC	50	1.0786607E-9	40.5	5
TCGTTTG	185	0.0	40.135136	1
TTTAGCG	45	1.9246727E-8	40.0	1
TCGTACA	45	1.9246727E-8	40.0	34
TTGGGAC	825	0.0	39.81818	5
GCGATCT	125	0.0	39.600002	9
TTTGGGC	1060	0.0	39.481133	4
TCGATCA	35	6.241331E-6	38.57143	17
TCGGATG	35	6.241331E-6	38.57143	5
CTCGATC	35	6.241331E-6	38.57143	16
CGATGCG	70	0.0	38.57143	10
TTTGGGA	2610	0.0	37.84483	4
GGCACCG	220	0.0	37.84091	8
CTACGAA	125	0.0	37.800003	11