SRR2934031.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934031.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	278645
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC	1132	0.4062516822480217	No Hit
TCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC	943	0.33842344201403224	No Hit
CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGCT	931	0.3341168870785408	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGC	776	0.2784905524951103	No Hit
GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC	664	0.23829603976385721	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCG	658	0.23614276229611156	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTC	470	0.16867340164007968	No Hit
TGCCGTGGGCTGTTCTCCAGCGCAGACTTGAATCATACTCTCAGATTGACT	305	0.10945827127707297	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCC	299	0.10730499380932727	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGGAGCTT	287	0.10299843887383589	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAGCG	30	2.1595624E-6	45.000004	1
CGGCGAA	20	7.0240756E-4	45.000004	31
ACCGGCA	20	7.0240756E-4	45.000004	26
CTCAACG	20	7.0240756E-4	45.000004	18
TTTACGG	20	7.0240756E-4	45.000004	2
TTTCGCA	20	7.0240756E-4	45.000004	13
TGGCGTA	20	7.0240756E-4	45.000004	12
GGCGTAC	20	7.0240756E-4	45.000004	13
TTCACGG	20	7.0240756E-4	45.000004	2
TTATCGG	40	6.7830115E-9	45.000004	2
ACGGGGC	35	1.2074997E-7	45.000004	5
AGAACGC	20	7.0240756E-4	45.000004	34
AACGGGT	20	7.0240756E-4	45.000004	19
AGCGCGA	20	7.0240756E-4	45.000004	13
TTCGGTG	20	7.0240756E-4	45.000004	1
CTCGAAT	20	7.0240756E-4	45.000004	37
GGATTCG	35	1.2074997E-7	45.000004	8
TGGGACG	30	2.1595624E-6	45.000004	6
CCAAACG	20	7.0240756E-4	45.000004	33
GCGTACC	20	7.0240756E-4	45.000004	14