##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934029.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 242329 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.025275555133724 31.0 30.0 31.0 26.0 34.0 2 30.253807839755044 31.0 30.0 33.0 26.0 34.0 3 30.28610277762876 31.0 30.0 34.0 26.0 34.0 4 33.99030244007114 35.0 33.0 37.0 28.0 37.0 5 34.42084934118492 35.0 35.0 37.0 32.0 37.0 6 33.91308922993121 35.0 35.0 37.0 30.0 37.0 7 34.389354967832986 35.0 35.0 37.0 32.0 37.0 8 34.45836858155648 35.0 35.0 37.0 32.0 37.0 9 35.84640715721189 37.0 35.0 39.0 30.0 39.0 10 35.28420040523421 37.0 34.0 39.0 30.0 39.0 11 35.380829368338084 37.0 35.0 39.0 30.0 39.0 12 35.33286152297084 37.0 34.0 39.0 30.0 39.0 13 35.19115334937214 37.0 34.0 39.0 29.0 39.0 14 35.85646373318918 38.0 34.0 40.0 28.0 41.0 15 36.12603526610517 38.0 34.0 40.0 30.0 41.0 16 36.32980782324856 38.0 35.0 40.0 31.0 41.0 17 36.1284163265643 38.0 34.0 40.0 30.0 41.0 18 36.2310165106116 38.0 35.0 40.0 30.0 41.0 19 36.23128474099262 38.0 34.0 40.0 30.0 41.0 20 36.27755241840638 38.0 34.0 40.0 30.0 41.0 21 35.947406212215625 38.0 34.0 40.0 29.0 41.0 22 36.15215677859439 38.0 34.0 40.0 30.0 41.0 23 36.267677413763934 38.0 34.0 40.0 30.0 41.0 24 36.152350729792964 38.0 34.0 40.0 30.0 41.0 25 35.70864403352467 38.0 34.0 40.0 29.0 41.0 26 35.78250642721259 38.0 34.0 40.0 29.0 41.0 27 35.822423234528266 38.0 34.0 40.0 30.0 41.0 28 35.701245001630014 38.0 34.0 40.0 29.0 41.0 29 35.816992600968106 38.0 34.0 40.0 29.0 41.0 30 35.383255821630925 38.0 34.0 40.0 28.0 41.0 31 35.519508601941986 38.0 34.0 40.0 29.0 41.0 32 35.59313165159762 38.0 34.0 40.0 29.0 41.0 33 35.62504694031668 38.0 34.0 40.0 29.0 41.0 34 35.57037333542416 38.0 34.0 40.0 29.0 41.0 35 35.601083650739284 38.0 34.0 40.0 29.0 41.0 36 35.43700506336427 38.0 34.0 40.0 28.0 41.0 37 35.48289721824462 38.0 34.0 40.0 29.0 41.0 38 35.37777154199456 38.0 34.0 40.0 28.0 41.0 39 35.35173668855151 37.0 34.0 40.0 28.0 41.0 40 35.26643530076879 37.0 34.0 40.0 28.0 41.0 41 35.15998085247742 37.0 34.0 40.0 27.0 41.0 42 35.4248562904151 37.0 34.0 40.0 29.0 41.0 43 35.42786459730367 37.0 34.0 40.0 29.0 41.0 44 35.352846749666774 37.0 34.0 40.0 28.0 41.0 45 35.42467059245901 37.0 34.0 40.0 29.0 41.0 46 35.308559850451246 37.0 34.0 40.0 28.0 41.0 47 35.200665211344905 37.0 34.0 40.0 28.0 41.0 48 35.20405729400938 37.0 34.0 40.0 28.0 41.0 49 35.277874294863594 37.0 34.0 40.0 28.0 41.0 50 35.08958069401516 37.0 34.0 40.0 28.0 41.0 51 33.95045165869541 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 3.0 11 7.0 12 5.0 13 4.0 14 8.0 15 14.0 16 33.0 17 50.0 18 98.0 19 173.0 20 325.0 21 540.0 22 768.0 23 1124.0 24 1496.0 25 2121.0 26 2723.0 27 3655.0 28 4661.0 29 6046.0 30 7850.0 31 10123.0 32 12836.0 33 17172.0 34 23679.0 35 23906.0 36 28178.0 37 35080.0 38 41126.0 39 18522.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.226514366831868 4.649876820355797 56.10182850587424 18.021780306938087 2 20.135848371428924 5.6179821647429735 53.53094346941555 20.715225994412556 3 21.018945318141867 5.6014756797576855 52.09033999232449 21.289239009775965 4 20.359511242979586 4.945755563717095 48.32356011868163 26.37117307462169 5 18.22357208588324 5.726924965645878 49.98411250820166 26.06539044026922 6 22.005207796012858 7.589269134111063 52.09859323481712 18.30692983505895 7 80.55082140395908 2.940217638004531 11.769123794510769 4.73983716352562 8 81.82553470694799 4.309843229658853 7.95942705990616 5.905195003486995 9 75.81799949655222 5.303533625773225 11.128259514956937 7.750207362717627 10 42.366782349615605 24.841434578610073 18.27515485146227 14.516628220312056 11 31.119263480639958 26.12481378621626 24.06769309492467 18.688229638219113 12 28.59954854763565 21.073416718593318 29.424872796900083 20.902161936870947 13 24.507178257657976 25.849568149086572 30.444148244741655 19.199105348513797 14 19.64065382187027 27.637220472993327 30.098750046424488 22.623375658711918 15 17.637591868905496 25.910642143532144 35.576839750917145 20.874926236645223 16 19.962530279083396 24.66440252714285 32.6774756632512 22.695591530522556 17 20.431314452665593 24.323956274321272 29.833408300285974 25.411320972727157 18 21.402308431925192 23.89066104345745 31.50345191867255 23.20357860594481 19 23.499044687181474 25.916832075401626 29.401763717920677 21.18235951949622 20 25.454237833688907 26.046820644660773 29.774397616463567 18.72454390518675 21 24.072645040420255 27.456061800279784 29.184290778239504 19.287002381060457 22 21.879345848000035 24.541429214002452 29.268886513789106 24.31033842420841 23 22.127768447028625 26.034440780921802 28.512889501462883 23.324901270586683 24 22.448406917867857 23.91500810881075 30.053769874839574 23.582815098481817 25 21.41468829566416 25.516137152383745 28.207519529235046 24.86165502271705 26 20.102010077209084 26.917537727634745 28.988688931163832 23.99176326399234 27 20.750714937130926 27.0578428500097 28.884285413631883 23.307156799227496 28 18.67419912598162 27.13872462643761 31.476216218446822 22.710860029133944 29 19.655509658357026 26.79415175236971 29.846613488274205 23.703725100999055 30 20.611235139005238 26.46319672841468 29.06296811359763 23.86260001898246 31 22.07989964057129 28.811656879696613 26.112021260352662 22.99642221937944 32 22.32832223959988 28.88511073788115 26.25315170697688 22.533415315542094 33 21.78402089720999 26.53252396535289 25.68367797498442 25.9997771624527 34 20.19774769012376 26.298131878561794 29.353482249338708 24.150638181975744 35 19.657985631104822 25.20952919378201 29.215240437586914 25.917244737526257 36 20.867085656277208 26.517255466741496 27.81136388958812 24.80429498739317 37 19.63776518699784 29.312216036875487 28.08372089184538 22.966297884281285 38 20.79445712234194 28.629260220609172 26.133892352958167 24.44239030409072 39 20.197335027999124 27.54272084645255 27.981380684936596 24.27856344061173 40 20.6747851061986 25.07046205778095 28.88057145451019 25.37418138151026 41 17.49274746315959 26.100466720862958 29.05388954685572 27.35289626912173 42 19.8127339278419 24.937584853649376 28.9870382826653 26.262642935843424 43 20.94095217658638 23.754069880204185 27.678899347581183 27.626078595628258 44 19.80365536109999 24.497274366666804 28.53599858044229 27.163071691790915 45 20.450296910398674 24.934696218776953 27.236112887850815 27.378893982973562 46 21.395293175806447 25.51201053113742 28.876032171139236 24.2166641219169 47 17.593849683694483 26.18506245641256 30.53287060153758 25.68821725835538 48 18.38739894936223 24.667291162015275 30.946770712543692 25.9985391760788 49 20.193621068877434 23.19986464682312 31.313627341341732 25.292886942957715 50 19.703791126938995 23.481712877946922 29.18222746761634 27.63226852749774 51 18.22357208588324 24.457246140577478 27.99953781842041 29.319643955118867 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 142.0 1 263.5 2 385.0 3 527.5 4 670.0 5 503.5 6 337.0 7 330.5 8 324.0 9 387.5 10 451.0 11 508.5 12 566.0 13 601.0 14 636.0 15 582.0 16 528.0 17 504.5 18 481.0 19 588.0 20 695.0 21 982.0 22 1269.0 23 1221.0 24 1173.0 25 1355.5 26 1973.5 27 2409.0 28 2947.0 29 3485.0 30 3768.0 31 4051.0 32 4652.5 33 5254.0 34 5881.5 35 6509.0 36 6947.5 37 7386.0 38 7966.5 39 8547.0 40 10225.5 41 11904.0 42 13689.5 43 15475.0 44 16946.0 45 18417.0 46 21613.0 47 24809.0 48 25647.0 49 26485.0 50 25541.0 51 24597.0 52 20638.0 53 16679.0 54 14881.5 55 13084.0 56 11442.0 57 9800.0 58 9466.0 59 9132.0 60 8400.5 61 7669.0 62 6806.5 63 5944.0 64 4954.5 65 3965.0 66 3476.5 67 2988.0 68 2448.0 69 1908.0 70 1428.5 71 949.0 72 837.5 73 726.0 74 613.0 75 377.0 76 254.0 77 187.0 78 120.0 79 80.0 80 40.0 81 41.5 82 43.0 83 23.5 84 4.0 85 2.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 242329.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.08517346252409 #Duplication Level Percentage of deduplicated Percentage of total 1 74.01325948650374 29.66834345043309 2 10.113446848813028 8.107985424773757 3 3.7070971195618605 4.457988932401817 4 2.050690769832609 3.2880918090694884 5 1.3341843562766373 2.6740505676167525 6 1.056229282052338 2.540348039235915 7 0.9151928184644526 2.567996401586273 8 0.8256295167699561 2.6476401916402907 9 0.6876814428956742 2.480924693288876 >10 5.182317939426383 34.25013102022457 >50 0.07412135312647986 2.007188574211093 >100 0.03294282361176882 2.362903325644062 >500 0.004117852951471102 1.2569688316297265 >1k 0.003088389713603327 1.6894387382442877 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCCGTCTTCTGC 1686 0.6957483421299143 RNA PCR Primer, Index 41 (96% over 26bp) CTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCCGTCTTCTGCT 1383 0.5707117183663531 RNA PCR Primer, Index 41 (96% over 27bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGC 1025 0.4229786777480203 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCCG 880 0.36314266967634906 No Hit TCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCCGTCTTCTGC 830 0.3425095634447384 Illumina PCR Primer Index 11 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCCGTCTTCTGC 746 0.3078459449756323 Illumina PCR Primer Index 11 (96% over 25bp) GAATCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCCGTCTTC 590 0.24347065353300676 RNA PCR Primer, Index 41 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGACATCT 372 0.15351031036318394 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCC 362 0.14938368911686178 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 311 0.1283379207606188 No Hit TTGTTTTTTTAAACAAAGACTCGTAGAGATGAAAAAATTACTAATGAAATT 280 0.11554539489702018 No Hit CGCTGTCTCTTATACACATCTGACGCTCGACATCTCGTATGCCGTCTTCTG 274 0.11306942214922688 RNA PCR Primer, Index 41 (96% over 25bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 265 0.10935546302753694 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6309603885626566 0.0 2 0.0 0.0 0.0 2.141303764716563 0.0 3 0.0 0.0 0.0 2.6513541507619807 0.0 4 0.0 0.0 0.0 3.4828683318958937 0.0 5 0.0 0.0 0.0 4.878078975277412 0.0 6 0.0 0.0 0.0 5.533386429193369 0.0 7 0.0 0.0 0.0 6.229960095572548 0.0 8 0.0 0.0 0.0 7.265742028399408 0.0 9 0.0 0.0 0.0 7.6771661666577256 0.0 10 0.0 0.0 0.0 8.866045747723136 0.0 11 0.0 0.0 0.0 10.611606534917406 0.0 12 0.0 0.0 0.0 12.641078863858638 0.0 13 0.0 0.0 0.0 13.17630163950662 0.0 14 0.0 0.0 0.0 13.404091132303604 0.0 15 0.0 0.0 0.0 13.804373393196853 0.0 16 0.0 0.0 0.0 14.553767811528955 0.0 17 0.0 0.0 0.0 15.553648139512811 0.0 18 0.0 0.0 0.0 16.761922840435936 0.0 19 0.0 0.0 0.0 17.708157092217604 0.0 20 0.0 0.0 0.0 18.539258611226884 0.0 21 0.0 0.0 0.0 19.629924606629828 0.0 22 0.0 0.0 0.0 20.700370157925796 0.0 23 0.0 0.0 0.0 21.743167346871402 0.0 24 0.0 0.0 0.0 22.57715750075311 0.0 25 4.1266212463221487E-4 0.0 0.0 23.338106458574913 0.0 26 4.1266212463221487E-4 0.0 0.0 24.046234664443794 0.0 27 4.1266212463221487E-4 0.0 0.0 24.67884570150498 0.0 28 4.1266212463221487E-4 0.0 0.0 25.37583203000879 0.0 29 4.1266212463221487E-4 0.0 0.0 26.086436208625464 0.0 30 4.1266212463221487E-4 0.0 0.0 26.870906907551305 0.0 31 4.1266212463221487E-4 0.0 0.0 27.597192246904 0.0 32 4.1266212463221487E-4 0.0 0.0 28.33255615299861 0.0 33 4.1266212463221487E-4 0.0 0.0 29.041509683116754 0.0 34 4.1266212463221487E-4 0.0 0.0 29.70011843402977 0.0 35 4.1266212463221487E-4 0.0 0.0 30.475923228338335 0.0 36 4.1266212463221487E-4 0.0 0.0 31.19643129794618 0.0 37 4.1266212463221487E-4 0.0 0.0 31.902908855316532 0.0 38 4.1266212463221487E-4 0.0 0.0 32.6531285978979 0.0 39 4.1266212463221487E-4 0.0 0.0 33.41490287996897 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCAC 20 7.0222584E-4 45.0 31 CTTCGTG 25 3.8816666E-5 45.0 1 TCGTTTG 70 0.0 45.0 1 CGTGAAC 20 7.0222584E-4 45.0 33 GATCCTA 20 7.0222584E-4 45.0 17 TCTTACT 20 7.0222584E-4 45.0 20 TTCCGAT 20 7.0222584E-4 45.0 13 GCACCGA 40 6.7775545E-9 45.0 9 TCGGAAT 20 7.0222584E-4 45.0 5 GGGACGA 20 7.0222584E-4 45.0 7 CTAGTTG 20 7.0222584E-4 45.0 1 GTTCGGA 20 7.0222584E-4 45.0 3 AAACAGG 45 3.8198777E-10 45.0 17 GCCTATA 45 3.8198777E-10 45.0 1 GGTGCAA 20 7.0222584E-4 45.0 8 CTCGAAC 20 7.0222584E-4 45.0 12 GGGCAAC 35 1.2066266E-7 45.0 7 CGGTAGT 45 3.8198777E-10 45.0 12 CGCCGGT 45 3.8198777E-10 45.0 28 ACATACG 50 2.1827873E-11 45.0 17 >>END_MODULE