##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934027.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 240234 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.81878085533272 31.0 30.0 31.0 25.0 34.0 2 29.99440129207356 31.0 30.0 33.0 25.0 34.0 3 29.970453807537652 31.0 30.0 33.0 25.0 34.0 4 33.84512600214791 35.0 33.0 37.0 28.0 37.0 5 34.295728331543415 35.0 35.0 37.0 32.0 37.0 6 33.7165263867729 35.0 33.0 37.0 29.0 37.0 7 34.39602637428507 35.0 35.0 37.0 32.0 37.0 8 34.26192795357859 35.0 35.0 37.0 31.0 37.0 9 35.67422180041127 37.0 35.0 39.0 30.0 39.0 10 35.18638910395698 37.0 34.0 39.0 30.0 39.0 11 35.35615275106771 37.0 34.0 39.0 30.0 39.0 12 35.275252462182706 37.0 34.0 39.0 30.0 39.0 13 35.10506422904335 37.0 34.0 39.0 29.0 39.0 14 35.72968855366018 38.0 34.0 40.0 27.0 41.0 15 36.02487158353938 38.0 34.0 40.0 30.0 41.0 16 36.23820941248949 38.0 34.0 40.0 30.0 41.0 17 36.04347844185253 38.0 34.0 40.0 30.0 41.0 18 36.14947925772372 38.0 34.0 40.0 30.0 41.0 19 36.16957632974516 38.0 34.0 40.0 30.0 41.0 20 36.16715369181715 38.0 34.0 40.0 30.0 41.0 21 35.86280459884946 38.0 34.0 40.0 29.0 41.0 22 36.089054838199424 38.0 34.0 40.0 30.0 41.0 23 36.18588959098213 38.0 34.0 40.0 30.0 41.0 24 36.032751400717636 38.0 34.0 40.0 30.0 41.0 25 35.62023277304628 38.0 34.0 40.0 29.0 41.0 26 35.71131480140197 38.0 34.0 40.0 29.0 41.0 27 35.713966382776796 38.0 34.0 40.0 29.0 41.0 28 35.641915798762874 38.0 34.0 40.0 29.0 41.0 29 35.8170783486101 38.0 34.0 40.0 30.0 41.0 30 35.36129773470866 37.0 34.0 40.0 27.0 41.0 31 35.48743724868253 38.0 34.0 40.0 29.0 41.0 32 35.53479524130639 38.0 34.0 40.0 29.0 41.0 33 35.51327455730662 38.0 34.0 40.0 29.0 41.0 34 35.46343565024102 38.0 34.0 40.0 28.0 41.0 35 35.55542512716768 38.0 34.0 40.0 29.0 41.0 36 35.327422429797615 38.0 34.0 40.0 27.0 41.0 37 35.3531889740836 38.0 34.0 40.0 28.0 41.0 38 35.19320745606367 37.0 34.0 40.0 27.0 41.0 39 35.22125927220959 37.0 34.0 40.0 28.0 41.0 40 35.18629336397013 37.0 34.0 40.0 27.0 41.0 41 35.04267505848465 37.0 33.0 40.0 27.0 41.0 42 35.29215265116511 37.0 34.0 40.0 28.0 41.0 43 35.19458944196076 37.0 34.0 40.0 28.0 41.0 44 35.07213383617639 37.0 33.0 40.0 27.0 41.0 45 35.168689694214805 37.0 34.0 40.0 28.0 41.0 46 35.04868586461534 37.0 33.0 40.0 27.0 41.0 47 34.91899980852003 37.0 33.0 40.0 27.0 41.0 48 34.96194127392459 37.0 33.0 40.0 27.0 41.0 49 34.97486617214882 36.0 34.0 40.0 28.0 41.0 50 34.7370189065661 36.0 33.0 39.0 27.0 41.0 51 33.55683625132163 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 1.0 11 4.0 12 2.0 13 7.0 14 6.0 15 7.0 16 19.0 17 49.0 18 96.0 19 162.0 20 325.0 21 553.0 22 864.0 23 1207.0 24 1656.0 25 2235.0 26 2915.0 27 3787.0 28 4924.0 29 6371.0 30 8130.0 31 10265.0 32 13374.0 33 17245.0 34 23832.0 35 24211.0 36 28122.0 37 35040.0 38 38982.0 39 15838.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.24594353838341 4.583031544244362 54.15136908181189 17.01965583556033 2 19.16006893279053 6.8932790529234 52.772297010414846 21.174355003871227 3 20.540389786624708 7.045630510252504 51.40030137282816 21.01367833029463 4 20.840513832346797 4.870667765595211 48.034832704779504 26.253985697278488 5 19.199613709966115 6.148172198772863 50.28763622135085 24.36457786991017 6 20.12079888775111 8.565814997044548 53.319679978687454 17.993706136516895 7 78.78651647976557 2.3743516737847266 13.224606009141088 5.614525837308624 8 78.74072779040435 5.5833062763805295 8.473821357509761 7.202144575705353 9 72.26246076741843 6.250572358617015 12.061989560178827 9.424977313785726 10 39.81368166038113 26.291032909579826 19.006052432211927 14.889232997827119 11 30.17557881065961 25.14673193636205 25.825653321345023 18.852035931633324 12 26.445881931783177 22.019780713804042 31.214565798346612 20.31977155606617 13 23.249415153558616 27.459477009915332 31.49762315076134 17.793484685764714 14 18.597700575272444 29.614459235578643 30.26007975557165 21.52776043357726 15 15.362937802309414 26.00214790579185 38.835468751300816 19.79944554059792 16 17.745614692341633 25.330302954619242 32.49706536127276 24.42701699176636 17 18.53859153991525 24.250106146507157 30.108560819867296 27.102741493710298 18 19.406911594528665 23.437565040751934 33.586003646444716 23.56951971827468 19 21.21431604185919 25.422712854966406 30.277146448879012 23.085824654295394 20 24.245527277571036 25.331135476243993 31.003937827285068 19.419399418899904 21 22.636262976930826 28.29699376441303 29.19986346645354 19.866879792202603 22 20.30561868844543 25.302829741002526 30.003663095148898 24.387888475403148 23 20.55787274074444 26.55286096056345 27.4453241422946 25.443942156397515 24 21.52859295520201 24.1772605043416 29.664410533063595 24.62973600739279 25 17.70898374085267 27.631808986238415 28.9039020288552 25.755305244053716 26 19.82691875421464 26.93249082144909 29.303096147922442 23.93749427641383 27 20.393449719856473 28.47931600023311 28.63166745756221 22.49556682234821 28 17.02589974774595 27.862001215481573 32.657325774036984 22.4547732627355 29 19.909338395064815 23.301864015917815 29.586569761149544 27.20222782786783 30 20.44007093084243 26.420073761415953 28.794425435200676 24.34542987254094 31 21.9598391568221 27.525662479082897 26.93748595119758 23.577012412897425 32 21.908222816087648 28.097604835285594 26.072079722270786 23.92209262635597 33 21.006601896484263 27.914866338653148 26.493751925206254 24.584779839656335 34 18.913642531864767 26.030869901845698 30.074427433252577 24.981060133036955 35 20.180740444733054 25.118426201120574 28.16254152201603 26.53829183213034 36 24.106496166237918 27.34334024326282 27.147697661446756 21.402465929052507 37 20.31977155606617 27.735874189332065 29.91083693398936 22.033517320612404 38 17.259005802675727 29.97327605584555 26.944146124195576 25.823572017283148 39 18.814988719331986 25.794850021229305 30.178076375533852 25.21208488390486 40 21.662212675974256 23.251496457620487 30.425751558896742 24.660539307508515 41 18.373752258214907 25.364436341233965 29.644430014069616 26.617381386481515 42 22.257049376857562 24.56646436391185 29.141170691908723 24.03531556732186 43 22.470591173605733 25.49597475794434 27.367067109568172 24.66636695888176 44 19.638352606208947 25.07388629419649 27.93609564008425 27.35166545951031 45 19.867296053014975 24.215972759892438 27.383717542063156 28.53301364502943 46 22.724094008341865 24.493202460933922 29.115778782353875 23.666924748370338 47 17.42759143168744 24.70549547524497 33.74085266864807 24.126060424419524 48 18.336288785101193 24.604760358650317 31.419782378847287 25.639168477401203 49 19.87562126926247 22.17795982250639 33.52606208946277 24.42035681876837 50 20.899206606891614 22.17254843194552 30.430330427832864 26.497914533330004 51 18.359183129781794 22.250805464671945 28.39564757694581 30.994363828600445 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 96.0 1 153.0 2 210.0 3 336.5 4 463.0 5 365.5 6 268.0 7 313.5 8 359.0 9 469.0 10 579.0 11 665.5 12 752.0 13 673.0 14 594.0 15 616.5 16 639.0 17 588.0 18 537.0 19 617.5 20 698.0 21 955.5 22 1213.0 23 1208.0 24 1203.0 25 1372.0 26 1861.5 27 2182.0 28 2406.5 29 2631.0 30 3148.5 31 3666.0 32 4259.0 33 4852.0 34 5574.5 35 6297.0 36 6817.5 37 7338.0 38 8029.0 39 8720.0 40 10041.0 41 11362.0 42 13160.5 43 14959.0 44 17508.5 45 20058.0 46 24361.0 47 28664.0 48 29930.0 49 31196.0 50 29860.5 51 28525.0 52 22847.0 53 17169.0 54 14735.5 55 12302.0 56 10635.0 57 8968.0 58 8036.0 59 7104.0 60 6061.5 61 5019.0 62 4394.0 63 3769.0 64 3066.0 65 2363.0 66 1867.5 67 1372.0 68 1145.5 69 919.0 70 819.5 71 720.0 72 554.0 73 388.0 74 337.0 75 190.0 76 94.0 77 84.0 78 74.0 79 48.0 80 22.0 81 24.0 82 26.0 83 31.5 84 37.0 85 18.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 240234.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.93939242571825 #Duplication Level Percentage of deduplicated Percentage of total 1 73.7826739483887 29.468351690435156 2 11.062242047775879 8.83638452508804 3 3.890649101596698 4.661704837783161 4 1.9823237587026306 3.166912260545968 5 1.306957935548422 2.6099552935887513 6 0.9525993246341768 2.282774295062314 7 0.7806311752199108 2.1824554392800355 8 0.6670279734856381 2.1312553593579593 9 0.6378454996456413 2.2927645545593047 >10 4.805728102722308 32.84630818285505 >50 0.08337849668570477 2.311496291116162 >100 0.03960478592570976 2.7947750942830742 >500 0.002084462417142619 0.636046521308391 >1k 0.006253387251427857 3.7788156547366314 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 2149 0.8945444857930186 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGC 1623 0.6755912984839781 No Hit CTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGCT 1523 0.633965217246518 TruSeq Adapter, Index 20 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 1320 0.5494642723344739 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCG 1275 0.5307325357776168 No Hit TCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 1188 0.49451784510102653 TruSeq Adapter, Index 23 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 872 0.36297942839065245 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGACCTTAT 656 0.27306709291773856 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGACCTTATCGTA 352 0.1465238059558597 No Hit CGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTG 310 0.12904085183612643 TruSeq Adapter, Index 20 (95% over 22bp) TTCCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCT 291 0.12113189640100902 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCT 267 0.11114163690401858 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 257 0.10697902878027256 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTC 253 0.10531398553077416 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6876628620428415 0.0 2 0.0 0.0 0.0 2.879276039195118 0.0 3 0.0 0.0 0.0 3.567771422862709 0.0 4 0.0 0.0 0.0 4.739129348884838 0.0 5 0.0 0.0 0.0 6.75757802808928 0.0 6 0.0 0.0 0.0 7.615907823205708 0.0 7 0.0 0.0 0.0 8.60036464447164 0.0 8 0.0 0.0 0.0 10.11472147989044 0.0 9 0.0 0.0 0.0 10.770332259380437 0.0 10 0.0 0.0 0.0 12.506972368607274 0.0 11 0.0 0.0 0.0 14.735216497248516 0.0 12 0.0 0.0 0.0 17.38055395988911 0.0 13 0.0 0.0 0.0 18.147306376283122 0.0 14 0.0 0.0 0.0 18.420789730013237 0.0 15 0.0 0.0 0.0 18.999392259213934 0.0 16 0.0 0.0 0.0 20.049618288835052 0.0 17 0.0 0.0 0.0 21.55814747288061 0.0 18 0.0 0.0 0.0 23.40759426226096 0.0 19 0.0 0.0 0.0 24.67760600081587 0.0 20 0.0 0.0 0.0 25.752807679179465 0.0 21 0.0 0.0 0.0 27.04321619754073 0.0 22 0.0 0.0 0.0 28.219569253311356 0.0 23 0.0 0.0 0.0 29.402998742892347 0.0 24 0.0 0.0 0.0 30.278811492128508 0.0 25 0.0 0.0 0.0 31.127983549372694 0.0 26 0.0 0.0 0.0 31.881415619770724 0.0 27 0.0 0.0 0.0 32.6127858671129 0.0 28 0.0 0.0 0.0 33.34124228876845 0.0 29 0.0 0.0 0.0 34.09259305510461 0.0 30 0.0 0.0 0.0 35.09161900480365 0.0 31 0.0 0.0 0.0 35.868777941507034 0.0 32 0.0 0.0 0.0 36.66841496207864 0.0 33 0.0 0.0 0.0 37.40561286079406 0.0 34 0.0 0.0 0.0 38.075792768717164 0.0 35 0.0 0.0 0.0 38.88750135284764 0.0 36 0.0 0.0 0.0 39.59139838657309 0.0 37 0.0 0.0 0.0 40.302788114921285 0.0 38 0.0 0.0 0.0 41.03082827576446 0.0 39 0.0 0.0 0.0 41.831714078773196 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 40 6.7757355E-9 45.000004 1 CGTGGCA 20 7.022134E-4 45.000004 15 AGGTAAG 20 7.022134E-4 45.000004 31 TTGGATA 20 7.022134E-4 45.000004 5 GGCACGT 20 7.022134E-4 45.000004 11 ACACCGC 20 7.022134E-4 45.000004 33 GGCAATC 20 7.022134E-4 45.000004 16 TCGGGTA 20 7.022134E-4 45.000004 5 TATGCCA 20 7.022134E-4 45.000004 10 TCTACGG 20 7.022134E-4 45.000004 2 CTACGGC 20 7.022134E-4 45.000004 6 GAGCGGT 20 7.022134E-4 45.000004 32 GTCACGT 20 7.022134E-4 45.000004 38 CGGGCTA 20 7.022134E-4 45.000004 6 GCTAGTG 20 7.022134E-4 45.000004 1 CGCAGAC 20 7.022134E-4 45.000004 37 GTATCAA 20 7.022134E-4 45.000004 35 TTACGTG 20 7.022134E-4 45.000004 1 CGGCTAT 20 7.022134E-4 45.000004 14 GTCTTAC 20 7.022134E-4 45.000004 31 >>END_MODULE