SRR2934026.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934026.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	321109
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC	3577	1.113951960237801	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG	2984	0.9292794658511596	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC	2377	0.7402470812091844	No Hit
GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	2025	0.6306269833607903	No Hit
CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	1954	0.6085161113515971	No Hit
TCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	1443	0.4493801170319113	No Hit
CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT	1434	0.4465773304391967	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTTACCTT	1342	0.4179266230470028	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTA	876	0.27280456169089	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTC	690	0.21488030544145445	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCT	638	0.1986864273502144	No Hit
GAACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT	586	0.18249254925897437	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTCTA	25	3.8845057E-5	45.000004	31
ACACGGC	25	3.8845057E-5	45.000004	18
TTCACGG	25	3.8845057E-5	45.000004	2
TACGGGA	60	0.0	45.000004	4
CGGGATC	60	0.0	45.000004	6
TAGGGCG	25	3.8845057E-5	45.000004	5
GAACGAG	25	3.8845057E-5	45.000004	12
AGTTCGA	25	3.8845057E-5	45.000004	33
CGAGCGA	25	3.8845057E-5	45.000004	15
CACCGGA	25	3.8845057E-5	45.000004	41
CTCTATC	25	3.8845057E-5	45.000004	28
CCTTGCG	50	2.1827873E-11	45.000004	1
CTAGCGG	25	3.8845057E-5	45.000004	2
CCGGGCA	20	7.025687E-4	45.0	5
GGTAATC	35	1.2082819E-7	45.0	8
CGCGGGT	20	7.025687E-4	45.0	4
TTCGTAG	20	7.025687E-4	45.0	1
CAATTCG	20	7.025687E-4	45.0	26
AGGAACG	35	1.2082819E-7	45.0	10
AGTATGT	20	7.025687E-4	45.0	37