##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934022.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 791454 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.084745291577274 31.0 30.0 31.0 26.0 34.0 2 30.322953702931567 31.0 30.0 33.0 26.0 34.0 3 30.356379524267993 31.0 30.0 34.0 26.0 34.0 4 34.069564371397455 35.0 33.0 37.0 30.0 37.0 5 34.4738064372661 35.0 35.0 37.0 32.0 37.0 6 33.96308818958524 35.0 35.0 37.0 30.0 37.0 7 34.473851923169256 35.0 35.0 37.0 32.0 37.0 8 34.64468307696973 35.0 35.0 37.0 32.0 37.0 9 36.004154379155324 37.0 35.0 39.0 31.0 39.0 10 35.32843601775972 37.0 34.0 39.0 30.0 39.0 11 35.44767604939769 37.0 35.0 39.0 30.0 39.0 12 35.485391444101616 37.0 35.0 39.0 30.0 39.0 13 35.50317137824813 37.0 35.0 39.0 30.0 39.0 14 36.14377462240383 38.0 35.0 40.0 29.0 41.0 15 36.414448597138936 38.0 35.0 40.0 30.0 41.0 16 36.5828942680181 38.0 35.0 40.0 31.0 41.0 17 36.324760504084885 38.0 35.0 40.0 30.0 41.0 18 36.45716238720128 38.0 35.0 40.0 30.0 41.0 19 36.465905788586575 38.0 35.0 40.0 30.0 41.0 20 36.44752316622318 38.0 35.0 40.0 30.0 41.0 21 36.15299183528038 38.0 34.0 40.0 30.0 41.0 22 36.36351828406957 38.0 35.0 40.0 30.0 41.0 23 36.433697978657 38.0 35.0 40.0 30.0 41.0 24 36.346180573981556 38.0 35.0 40.0 30.0 41.0 25 35.891034728487064 38.0 34.0 40.0 29.0 41.0 26 36.018348507936025 38.0 34.0 40.0 30.0 41.0 27 36.02394959151132 38.0 34.0 40.0 30.0 41.0 28 35.928692002314726 38.0 34.0 40.0 29.0 41.0 29 36.06095869121895 38.0 34.0 40.0 30.0 41.0 30 35.57089357056759 38.0 34.0 40.0 28.0 41.0 31 35.74236531750424 38.0 34.0 40.0 29.0 41.0 32 35.77171762351318 38.0 34.0 40.0 29.0 41.0 33 35.737455366957526 38.0 34.0 40.0 29.0 41.0 34 35.69321148165275 38.0 34.0 40.0 29.0 41.0 35 35.7061496941073 38.0 34.0 40.0 29.0 41.0 36 35.49527957404979 38.0 34.0 40.0 28.0 41.0 37 35.53824859056875 38.0 34.0 40.0 28.0 41.0 38 35.4034928119638 38.0 34.0 40.0 27.0 41.0 39 35.33064334756031 38.0 34.0 40.0 27.0 41.0 40 35.27528447641935 38.0 34.0 40.0 27.0 41.0 41 35.16514794290003 38.0 34.0 40.0 27.0 41.0 42 35.373570668668044 38.0 34.0 40.0 28.0 41.0 43 35.29186787861329 38.0 34.0 40.0 27.0 41.0 44 35.28876851971182 38.0 34.0 40.0 28.0 41.0 45 35.337169311166534 38.0 34.0 40.0 28.0 41.0 46 35.22661076954567 37.0 34.0 40.0 27.0 41.0 47 35.168392603992146 37.0 34.0 40.0 27.0 41.0 48 35.101048197368385 37.0 34.0 40.0 27.0 41.0 49 35.127488142077745 37.0 34.0 40.0 27.0 41.0 50 34.893547824636684 37.0 33.0 40.0 27.0 41.0 51 33.78281492038703 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 6.0 11 14.0 12 9.0 13 12.0 14 19.0 15 48.0 16 94.0 17 147.0 18 358.0 19 607.0 20 1227.0 21 2022.0 22 3194.0 23 4292.0 24 5873.0 25 7437.0 26 9689.0 27 11943.0 28 15141.0 29 18955.0 30 24224.0 31 30902.0 32 39145.0 33 51253.0 34 69061.0 35 73872.0 36 90399.0 37 116557.0 38 142145.0 39 72804.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.854760984213865 4.208330490464386 55.557998317021585 15.378910208300168 2 19.584713704144523 5.697235720585151 54.53418644671706 20.18386412855327 3 20.908227136384426 5.764453777477907 52.864853800726266 20.462465285411408 4 19.279579103776086 4.747212093185453 50.089076560356006 25.884132242682455 5 19.71674917304101 5.513649561440084 50.826706289942315 23.942894975576596 6 21.7409982134148 7.8604694650605085 52.680509543195186 17.718022778329505 7 84.62551203228489 2.0803483209384246 9.810172164143463 3.4839674826332296 8 86.91345296125864 3.774571863936502 5.652507915810647 3.6594672589942054 9 81.59021244443771 4.9886664291291725 7.28507279008003 6.136048336353092 10 40.695732158786235 31.240855438218773 14.705592491793585 13.35781991120141 11 29.347757418624454 24.781351790502036 27.28686695626025 18.584023834613255 12 25.598202801426233 22.860077780894407 30.46734238502806 21.0743770326513 13 24.895066548403317 23.28511827598319 32.38457320324365 19.43524197236984 14 20.547498654375364 26.655876399639144 31.63241325459218 21.16421169139331 15 18.932875441908184 25.085601942753467 35.25170129912794 20.72982131621042 16 23.012834605675124 25.02242707725275 30.540246179815885 21.42449213725624 17 23.735934116196265 25.344618891306382 28.96820282669618 21.95124416580117 18 23.134509396629493 24.710974990334243 30.465699838525044 21.688815774511216 19 24.160974611285052 25.564467423248853 28.549985217081474 21.724572748384617 20 25.13121419564498 28.33417987653104 28.25129445299411 18.28331147482987 21 25.278790681454637 27.06853462108979 29.34699932023845 18.305675377217124 22 23.126296664114403 24.047007153921772 30.785870056882647 22.040826125081182 23 22.03551943637912 25.98773902210362 30.269226006817828 21.707515534699425 24 22.003300254973755 26.96732848655765 29.075473748316387 21.953897510152203 25 21.98409509586154 28.31623821472884 27.49306971725457 22.206596972155047 26 21.30736593661792 27.808817695027127 27.888544375289026 22.995271993065927 27 22.012776484798863 27.094562665676087 29.696482676188385 21.19617817333667 28 19.579912414366472 27.43520154045592 30.42362537810157 22.561260667076038 29 21.640929226461676 26.07264604133658 29.938316061325104 22.34810867087664 30 22.975687784760705 27.453648601182127 28.780826175621073 20.78983743843609 31 23.294215456615294 27.444172371357023 27.38276640209033 21.878845769937357 32 24.804221091813293 27.45023715844509 26.847927990761306 20.897613758980306 33 23.89538747672006 27.007634050747104 26.893792943114825 22.203185529418008 34 22.158457724643505 26.475828032962117 28.141749236215873 23.223965006178503 35 22.70593110907267 26.69125432431954 28.331905581373018 22.27090898523477 36 24.263949642051212 27.832824143917396 27.151167345164723 20.75205886886667 37 22.348993118993647 27.811218339916156 28.336959570613075 21.502828970477122 38 21.623998362507486 29.05803748543819 27.624852486689054 21.693111665365265 39 20.75938715326475 27.89284026614307 28.58195169902483 22.765820881567343 40 22.665751894614218 26.604452059121563 27.972061547480966 22.757734498783254 41 21.383428474680777 25.834603148129897 27.46628357428227 25.315684802907057 42 22.691653589469507 25.731754467094742 28.69895154993215 22.8776403935036 43 21.76449926338107 26.00504893525082 29.35710729871856 22.873344502649555 44 21.97234457087841 25.970050059763423 28.807612318593375 23.249993050764793 45 21.864694600065196 26.233615598632394 27.004728006934076 24.896961794368337 46 22.721472125985844 26.95519891238152 27.763205442135614 22.560123519497026 47 20.541307517556294 26.948755076100444 30.024233878406072 22.48570352793719 48 20.43252039916407 27.55119059351523 29.381240097339834 22.63504890998087 49 22.118910258840057 25.5241618590594 30.466836986104056 21.890090895996483 50 21.47793807346984 26.133799311141264 28.43879745380022 23.94946516158867 51 20.89167532162324 25.365719296383617 27.651385930199357 26.091219451793783 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 128.0 1 317.0 2 506.0 3 1664.0 4 2822.0 5 1980.0 6 1138.0 7 1217.0 8 1296.0 9 1402.5 10 1509.0 11 1728.0 12 1947.0 13 1982.5 14 2018.0 15 2068.5 16 2119.0 17 2070.0 18 2021.0 19 2249.5 20 2478.0 21 2763.0 22 3048.0 23 3327.0 24 3606.0 25 4613.5 26 7122.5 27 8624.0 28 10021.5 29 11419.0 30 13902.5 31 16386.0 32 17783.0 33 19180.0 34 22763.5 35 26347.0 36 28129.0 37 29911.0 38 33383.0 39 36855.0 40 39047.5 41 41240.0 42 44471.5 43 47703.0 44 51364.5 45 55026.0 46 65118.0 47 75210.0 48 74544.5 49 73879.0 50 71778.5 51 69678.0 52 62785.5 53 55893.0 54 50636.0 55 45379.0 56 41967.5 57 38556.0 58 34904.0 59 31252.0 60 28167.0 61 25082.0 62 21840.0 63 18598.0 64 15868.0 65 13138.0 66 10746.5 67 8355.0 68 6939.5 69 5524.0 70 4375.5 71 3227.0 72 2578.5 73 1930.0 74 1675.5 75 1100.5 76 780.0 77 576.0 78 372.0 79 267.0 80 162.0 81 107.5 82 53.0 83 31.5 84 10.0 85 8.5 86 7.0 87 3.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 791454.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.21527518810667 #Duplication Level Percentage of deduplicated Percentage of total 1 74.14025439836858 25.367292067564172 2 9.119766280156865 6.240706258535662 3 3.250932307819369 3.336946305898393 4 1.7255471945811414 2.3616028845063686 5 1.1966624860481316 2.0472068133710346 6 0.9711798969124333 1.993751245800959 7 0.8036240209596648 1.9247351917435416 8 0.7206499612462179 1.9725789390670208 9 0.642566266496119 1.9787023471283103 >10 7.3008717561988234 46.421406120923 >50 0.08754161207355735 1.99645620563321 >100 0.035540396464954625 2.0909220331237037 >500 0.001496437745892818 0.3014460598718277 >1k 0.003366984928258841 1.9662475268327582 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGC 3102 0.39193686556641316 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCG 2452 0.3098095404154884 No Hit GAATCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTC 1884 0.23804289320668034 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1697 0.21441549350941433 No Hit GCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 1481 0.18712395161310702 No Hit CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGCT 1315 0.16614989626687085 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 1237 0.15629461724875987 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGATACGTT 1124 0.1420170976455991 No Hit TCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 1069 0.13506786244052085 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1825753612970558 0.0 2 0.0 0.0 0.0 0.7280271500301976 0.0 3 0.0 0.0 0.0 0.9544458679847471 0.0 4 0.0 0.0 0.0 1.4348275452521562 0.0 5 0.0 0.0 0.0 2.368931106545674 0.0 6 0.0 0.0 0.0 2.856767417942167 0.0 7 0.0 0.0 0.0 3.3356328984375594 0.0 8 0.0 0.0 0.0 4.084634103813993 0.0 9 0.0 0.0 0.0 4.420471688815774 0.0 10 0.0 0.0 0.0 5.342066626740151 0.0 11 0.0 0.0 0.0 6.45824015040672 0.0 12 0.0 0.0 0.0 7.947398079989488 0.0 13 0.0 0.0 0.0 8.314696748010624 0.0 14 0.0 0.0 0.0 8.461515135434277 0.0 15 0.0 0.0 0.0 8.727607668923273 0.0 16 0.0 0.0 0.0 9.12333502641973 0.0 17 0.0 0.0 0.0 9.722611800559477 0.0 18 0.0 0.0 0.0 10.351075362560554 0.0 19 0.0 0.0 0.0 11.011126357311985 0.0 20 0.0 0.0 0.0 11.536867588008905 0.0 21 0.0 0.0 0.0 12.231538409054727 0.0 22 0.0 0.0 0.0 13.019202632117596 0.0 23 0.0 0.0 0.0 13.735605606895662 0.0 24 0.0 0.0 0.0 14.306706391022093 0.0 25 0.0 0.0 0.0 14.821707894583893 0.0 26 0.0 0.0 0.0 15.273281833182978 0.0 27 0.0 0.0 0.0 15.728519913981103 0.0 28 0.0 0.0 0.0 16.220525766500643 0.0 29 0.0 0.0 0.0 16.76193436384174 0.0 30 0.0 0.0 0.0 17.374225160274634 0.0 31 0.0 0.0 0.0 17.93509161618995 0.0 32 0.0 0.0 0.0 18.454894409529803 0.0 33 0.0 0.0 0.0 18.975834350448668 0.0 34 0.0 0.0 0.0 19.547440533499103 0.0 35 0.0 0.0 0.0 20.1776729917342 0.0 36 0.0 0.0 0.0 20.745488682854596 0.0 37 0.0 0.0 0.0 21.314062472360995 0.0 38 0.0 0.0 0.0 21.934566001308983 0.0 39 0.0 0.0 0.0 22.789321931533607 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATTCG 20 7.031953E-4 45.000004 15 CGTAAAC 20 7.031953E-4 45.000004 20 CGATCGA 80 0.0 45.000004 41 TTGTTCG 265 0.0 41.603775 1 TCGTACG 60 3.6379788E-12 41.250004 30 CCGATCG 55 6.002665E-11 40.90909 40 ACCAACG 55 6.002665E-11 40.90909 36 CGTTAGG 50 1.0804797E-9 40.5 2 CGTTTGG 500 0.0 39.600002 2 CGTTTTT 1020 0.0 39.485294 1 TTTCGCG 275 0.0 39.272728 1 GCGATTT 440 0.0 38.863632 9 CCGATGA 635 0.0 38.622047 18 TTGTGCG 210 0.0 38.57143 1 GTTTACG 35 6.245824E-6 38.571426 1 ACGATCG 35 6.245824E-6 38.571426 40 TTGGGAT 3030 0.0 38.09406 5 TTTGGGA 4690 0.0 38.091686 4 TTTGGGC 1655 0.0 37.794563 4 TGGGCGA 1030 0.0 37.79126 6 >>END_MODULE