##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934021.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 108073 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.01814514263507 31.0 30.0 31.0 26.0 34.0 2 30.355472689756 31.0 30.0 33.0 27.0 34.0 3 30.342240892729915 31.0 30.0 34.0 26.0 34.0 4 34.053232537266474 35.0 33.0 37.0 30.0 37.0 5 34.445411897513715 35.0 35.0 37.0 32.0 37.0 6 34.01878359997409 35.0 35.0 37.0 30.0 37.0 7 34.4869301305599 35.0 35.0 37.0 32.0 37.0 8 34.666382907849325 35.0 35.0 37.0 32.0 37.0 9 35.88850129079419 37.0 35.0 39.0 30.0 39.0 10 35.29454165240162 37.0 34.0 39.0 30.0 39.0 11 35.39025473522526 37.0 35.0 39.0 30.0 39.0 12 35.2159743876824 37.0 34.0 39.0 30.0 39.0 13 34.95308726508934 37.0 34.0 39.0 27.0 39.0 14 35.4842282531252 38.0 33.0 40.0 27.0 41.0 15 36.00608847723298 38.0 34.0 40.0 30.0 41.0 16 36.22409852599632 38.0 34.0 40.0 31.0 41.0 17 36.079557336244946 38.0 34.0 40.0 30.0 41.0 18 36.18027629472671 38.0 34.0 40.0 30.0 41.0 19 36.18009123462845 38.0 34.0 40.0 30.0 41.0 20 36.237395094056794 38.0 34.0 40.0 30.0 41.0 21 35.81766953818253 38.0 34.0 40.0 29.0 41.0 22 36.05485181312631 38.0 34.0 40.0 30.0 41.0 23 36.195238403671596 38.0 34.0 40.0 30.0 41.0 24 36.07789179536054 38.0 34.0 40.0 30.0 41.0 25 35.63668076207748 37.0 34.0 40.0 29.0 41.0 26 35.67270271020514 37.0 34.0 40.0 29.0 41.0 27 35.71853284354094 38.0 34.0 40.0 29.0 41.0 28 35.60688608625651 38.0 34.0 40.0 29.0 41.0 29 35.790289896643934 38.0 34.0 40.0 30.0 41.0 30 35.38534138961628 37.0 34.0 40.0 29.0 41.0 31 35.481933507906696 37.0 34.0 40.0 29.0 41.0 32 35.539885077678974 37.0 34.0 40.0 29.0 41.0 33 35.50247517881432 38.0 34.0 40.0 29.0 41.0 34 35.51030322097101 37.0 34.0 40.0 29.0 41.0 35 35.57480591822194 38.0 34.0 40.0 29.0 41.0 36 35.31258501198264 37.0 34.0 40.0 28.0 41.0 37 35.31478722715202 37.0 34.0 40.0 28.0 41.0 38 35.241161067056524 37.0 34.0 40.0 28.0 41.0 39 35.219360987480684 37.0 34.0 40.0 28.0 41.0 40 35.16140016470349 37.0 34.0 40.0 28.0 41.0 41 35.10863953068759 37.0 34.0 40.0 27.0 41.0 42 35.290220499107086 37.0 34.0 40.0 29.0 41.0 43 35.20038307440341 37.0 34.0 40.0 28.0 41.0 44 35.069786163056456 37.0 33.0 40.0 28.0 41.0 45 35.216298242854364 37.0 34.0 40.0 28.0 41.0 46 35.194516669288355 37.0 34.0 40.0 28.0 41.0 47 35.14430986462854 37.0 34.0 40.0 28.0 41.0 48 35.17817586261138 37.0 34.0 40.0 28.0 41.0 49 35.206841671832926 37.0 34.0 40.0 28.0 41.0 50 34.94995049642371 37.0 34.0 40.0 27.0 41.0 51 33.87954438203807 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 0.0 12 0.0 13 4.0 14 6.0 15 3.0 16 13.0 17 17.0 18 39.0 19 86.0 20 111.0 21 215.0 22 312.0 23 473.0 24 672.0 25 983.0 26 1259.0 27 1637.0 28 2048.0 29 2802.0 30 3461.0 31 4549.0 32 5974.0 33 8073.0 34 11394.0 35 11021.0 36 12256.0 37 15484.0 38 17555.0 39 7621.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.56110221794528 4.508063993781981 56.52383111415432 18.40700267411842 2 19.63672702710205 3.9871198171606226 56.615435862796446 19.760717292940882 3 21.00987295624254 3.8973656695011702 53.20570355222859 21.887057822027703 4 20.731357508350836 4.648709668464834 48.12395325381918 26.49597956936515 5 17.477075680327186 5.199263460808898 51.83255762308809 25.49110323577582 6 20.950653724797128 6.045913410380021 53.55639243844439 19.447040426378468 7 82.4933147039501 2.596393178684778 9.92662367103717 4.983668446327945 8 83.2909237274805 2.6685666170088735 7.765121723279635 6.275387932230991 9 76.82399859354325 6.243002415034282 10.765871216677617 6.1671277747448485 10 40.21355935340002 28.346580552034272 17.712102005126166 13.727758089439545 11 32.897208368417644 26.71435048532011 23.889408085275694 16.499033060986555 12 31.379715562628963 21.240272778584846 29.815957732273557 17.564053926512635 13 24.401099256983706 29.314444865970223 28.10230122232195 18.182154654724123 14 17.45764437000916 32.46046653650773 29.729904786579443 20.351984306903667 15 15.379419466471736 25.79737769840756 40.717848121177354 18.105354713943353 16 17.290164981077606 22.851220933998313 37.54221683491714 22.31639725000694 17 17.444690163130478 23.531316795129218 29.711398776752752 29.312594264987556 18 19.74221128311419 22.821611318275608 33.96778103689173 23.46839636171847 19 23.875528577905676 25.713175353696112 29.12290766426397 21.288388404134242 20 27.196432041305414 24.220665661173467 29.756738500828146 18.826163796692978 21 23.094574963219305 27.200133243270752 29.2468979301028 20.458393863407142 22 19.773671499819567 25.745560870892824 27.71367501596143 26.767092613326177 23 20.57220582384129 27.07614297743192 27.441636671509073 24.910014527217715 24 21.445689487661117 23.200059219231445 31.78037067537683 23.57388061773061 25 18.462520703598493 24.443663079585097 32.18472699009003 24.90908922672638 26 18.781749373108916 29.144189575564667 30.020449140858496 22.053611910467925 27 20.432485449649775 29.964005810887084 29.60776512172328 19.995743617739862 28 17.95082953189048 27.638725676163332 33.59858614084924 20.811858651096944 29 17.667687581542104 26.405300121214363 32.570577294976545 23.356435002266988 30 21.82968919156496 25.379141876324336 30.125008096379297 22.666160835731404 31 23.21116282512746 28.041231389893866 26.667160160262043 22.080445624716628 32 24.923894034587732 29.180276294726713 25.109879433345977 20.785950237339577 33 25.128385443172668 27.343554819427606 25.801078900372897 21.726980837026826 34 20.382519223117708 26.767092613326177 29.450464038196404 23.39992412535971 35 21.54377133974258 24.859123000194312 28.201308374894747 25.39579728516836 36 25.87325233869699 24.153118725306044 28.53071534980985 21.442913586187114 37 23.03443043128256 27.93667243437306 29.53096518094251 19.497931953401867 38 22.307144245093593 28.742609162325465 26.30166646618489 22.64858012639605 39 21.682566413442768 26.267430348005515 29.041481221026526 23.00852201752519 40 23.356435002266988 23.17877730793075 29.51430977209849 23.950477917703775 41 20.536119104679244 23.581283021661285 29.85944685536628 26.023151018293188 42 25.409676792538377 23.097350864693308 28.15134214836268 23.34163019440563 43 27.26120307569883 23.423056637643075 27.159420021652032 22.15632026500606 44 21.434585881765102 27.35558372581496 27.580431745209253 23.62939864721068 45 21.44939068962646 26.36366159910431 25.871401737714322 26.31554597355491 46 22.817910116310273 25.558650171643244 28.748160965273474 22.875278746773013 47 20.873853784016358 25.171874566265394 31.438934794074374 22.51533685564387 48 24.029128459467213 22.740184875038167 29.654030146290005 23.57665651920461 49 23.110305071571993 20.822036956501623 32.52801347237516 23.53964449955123 50 21.944426452490447 24.15496932628871 28.69726943825007 25.20333478297077 51 20.29554097693226 23.814458745477594 26.0795943482646 29.81040592932555 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 28.0 1 59.5 2 91.0 3 160.5 4 230.0 5 181.0 6 132.0 7 170.5 8 209.0 9 230.5 10 252.0 11 273.0 12 294.0 13 295.0 14 296.0 15 300.5 16 305.0 17 322.5 18 340.0 19 372.0 20 404.0 21 449.0 22 494.0 23 467.5 24 441.0 25 604.5 26 810.5 27 853.0 28 1037.5 29 1222.0 30 1476.5 31 1731.0 32 2147.5 33 2564.0 34 2642.0 35 2720.0 36 2873.5 37 3027.0 38 3542.0 39 4057.0 40 4853.0 41 5649.0 42 6430.0 43 7211.0 44 8048.5 45 8886.0 46 8868.5 47 8851.0 48 9664.0 49 10477.0 50 11679.0 51 12881.0 52 12106.0 53 11331.0 54 8979.0 55 6627.0 56 5459.5 57 4292.0 58 3841.5 59 3391.0 60 3075.0 61 2759.0 62 2509.5 63 2260.0 64 1727.0 65 1194.0 66 991.0 67 788.0 68 611.0 69 434.0 70 345.5 71 257.0 72 219.0 73 181.0 74 120.0 75 56.5 76 54.0 77 37.5 78 21.0 79 16.5 80 12.0 81 6.0 82 0.0 83 0.0 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 108073.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.23954179119669 #Duplication Level Percentage of deduplicated Percentage of total 1 74.5916211750434 32.99899142246445 2 10.28842734935475 9.10310623374941 3 3.7334504611909396 4.954984131096573 4 1.9409759260421242 3.4347154238338904 5 1.3427872246972454 2.9702145771839406 6 1.068791700654661 2.8369713064317637 7 1.0436928740248061 3.232074616231621 8 0.8575432431867144 3.0349856115773597 9 0.7696973499822217 3.0645952273000656 >10 4.287716215933571 29.723427683140102 >50 0.05228922214553137 1.572085534777419 >100 0.01882411997239129 1.6313047662228308 >500 0.004183137771642509 1.4425434659905805 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 922 0.8531270530104652 No Hit CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGCT 637 0.5894164129801153 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 469 0.4339659304359091 No Hit GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 383 0.3543900881811368 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 161 0.1489733791048643 No Hit CGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG 149 0.13786977320884958 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCC 136 0.12584086682150028 No Hit TTCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCT 126 0.11658786190815466 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 118 0.1091854579774782 No Hit TTTGTCGGGAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCC 111 0.10270835453813625 No Hit TTTTTTGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAGCTA 110 0.10178305404680171 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6347561370555088 0.0 2 0.0 0.0 0.0 2.4835065187419616 0.0 3 0.0 0.0 0.0 3.116412054814801 0.0 4 0.0 0.0 0.0 4.068546260398064 0.0 5 0.0 0.0 0.0 5.463899401330582 0.0 6 0.0 0.0 0.0 6.231898809138268 0.0 7 0.0 0.0 0.0 7.043387340038677 0.0 8 0.0 0.0 0.0 8.297169505797008 0.0 9 0.0 0.0 0.0 8.937477445800523 0.0 10 0.0 0.0 0.0 10.106131966356074 0.0 11 0.0 0.0 0.0 12.146419549748781 0.0 12 0.0 0.0 0.0 14.053463862389311 0.0 13 0.0 0.0 0.0 14.685444097970816 0.0 14 0.0 0.0 0.0 14.899188511469099 0.0 15 0.0 0.0 0.0 15.24617619571956 0.0 16 0.0 0.0 0.0 16.123361061504724 0.0 17 0.0 0.0 0.0 17.64825627122408 0.0 18 0.0 0.0 0.0 19.692245056582124 0.0 19 0.0 0.0 0.0 20.64067806020005 0.0 20 0.0 0.0 0.0 21.710325428182802 0.0 21 0.0 0.0 0.0 22.975211199837148 0.0 22 0.0 0.0 0.0 24.066140479120595 0.0 23 0.0 0.0 0.0 25.178351669704735 0.0 24 0.0 0.0 0.0 26.06201363892924 0.0 25 0.0 0.0 0.0 26.778196219222192 0.0 26 0.0 0.0 0.0 27.407400553329694 0.0 27 0.0 0.0 0.0 27.956103744691088 0.0 28 0.0 0.0 0.0 28.62602130041731 0.0 29 0.0 0.0 0.0 29.366261693484958 0.0 30 0.0 0.0 0.0 30.22216464796943 0.0 31 0.0 0.0 0.0 31.08917120834991 0.0 32 0.0 0.0 0.0 31.78129597586816 0.0 33 0.0 0.0 0.0 32.48267374829976 0.0 34 0.0 0.0 0.0 33.177574417292014 0.0 35 0.0 0.0 0.0 33.90023410102431 0.0 36 0.0 0.0 0.0 34.58218056313788 0.0 37 0.0 0.0 0.0 35.3511052714369 0.0 38 0.0 0.0 0.0 36.12002997973592 0.0 39 0.0 0.0 0.0 36.782545131531464 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTTGCG 30 2.147226E-6 45.000004 1 CTCGTTG 20 7.004915E-4 45.000004 1 ACGCCGG 30 2.147226E-6 45.000004 27 CATGCAC 65 0.0 45.000004 45 CTTTTCG 40 6.717528E-9 45.000004 1 TATGGGA 30 2.147226E-6 45.000004 4 TGGGTGA 30 2.147226E-6 45.000004 6 TTATGGG 40 6.717528E-9 45.000004 3 CACGCCG 30 2.147226E-6 45.000004 26 GAATCCA 40 6.717528E-9 45.000004 9 TTCGTTG 30 2.147226E-6 45.000004 1 GCTTGCG 20 7.004915E-4 45.000004 1 TATTGGG 40 6.717528E-9 45.000004 3 GGCCACC 20 7.004915E-4 45.000004 8 TTCCCCG 20 7.004915E-4 45.000004 1 AGTGCCC 20 7.004915E-4 45.000004 13 ACCTACA 20 7.004915E-4 45.000004 25 CACTCAG 20 7.004915E-4 45.000004 21 CTACGGG 20 7.004915E-4 45.000004 3 TCTCGTG 20 7.004915E-4 45.000004 1 >>END_MODULE