##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934019.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 526447 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.998128966448665 31.0 30.0 31.0 26.0 34.0 2 30.369138773703714 31.0 30.0 33.0 27.0 34.0 3 30.420507667438507 31.0 30.0 34.0 26.0 34.0 4 33.98468411824932 35.0 33.0 37.0 28.0 37.0 5 34.356320769232234 35.0 35.0 37.0 32.0 37.0 6 33.8939057492967 35.0 35.0 37.0 30.0 37.0 7 34.290775709615595 35.0 35.0 37.0 31.0 37.0 8 34.51352747759984 35.0 35.0 37.0 32.0 37.0 9 35.78887523340431 37.0 35.0 39.0 30.0 39.0 10 35.23341380993718 37.0 34.0 39.0 30.0 39.0 11 35.360682081956966 37.0 35.0 39.0 30.0 39.0 12 35.30933028396021 37.0 34.0 39.0 30.0 39.0 13 35.2291968612225 37.0 34.0 39.0 30.0 39.0 14 35.77189536648513 38.0 34.0 40.0 27.0 41.0 15 36.11118308205764 38.0 34.0 40.0 29.0 41.0 16 36.290581957917894 38.0 35.0 40.0 30.0 41.0 17 36.11030550083864 38.0 34.0 40.0 30.0 41.0 18 36.23327514450647 38.0 35.0 40.0 30.0 41.0 19 36.23313837860221 38.0 34.0 40.0 30.0 41.0 20 36.263589687091006 38.0 34.0 40.0 30.0 41.0 21 35.91687672263305 38.0 34.0 40.0 29.0 41.0 22 36.12191730601561 38.0 34.0 40.0 30.0 41.0 23 36.268359398002076 38.0 34.0 40.0 30.0 41.0 24 36.182101901995836 38.0 34.0 40.0 30.0 41.0 25 35.69319798574215 38.0 34.0 40.0 29.0 41.0 26 35.80114427473231 38.0 34.0 40.0 29.0 41.0 27 35.86073431893429 38.0 34.0 40.0 30.0 41.0 28 35.736573672183525 38.0 34.0 40.0 29.0 41.0 29 35.85926788451639 38.0 34.0 40.0 29.0 41.0 30 35.38771044378636 38.0 34.0 40.0 27.0 41.0 31 35.51902090808761 38.0 34.0 40.0 29.0 41.0 32 35.59019996314919 38.0 34.0 40.0 29.0 41.0 33 35.61824837068119 38.0 34.0 40.0 29.0 41.0 34 35.554050075316226 38.0 34.0 40.0 29.0 41.0 35 35.56841239478998 38.0 34.0 40.0 29.0 41.0 36 35.34888792224098 38.0 34.0 40.0 27.0 41.0 37 35.42358869933725 38.0 34.0 40.0 28.0 41.0 38 35.298573265684865 37.0 34.0 40.0 28.0 41.0 39 35.23909719306977 37.0 34.0 40.0 27.0 41.0 40 35.08388498747262 37.0 33.0 40.0 27.0 41.0 41 34.94226579313777 37.0 33.0 40.0 26.0 41.0 42 35.22155126726907 37.0 34.0 40.0 28.0 41.0 43 35.228442749222616 37.0 34.0 40.0 28.0 41.0 44 35.17576128271222 37.0 34.0 40.0 28.0 41.0 45 35.248351685924696 37.0 34.0 40.0 28.0 41.0 46 35.153943321929845 37.0 34.0 40.0 28.0 41.0 47 35.09276907267019 37.0 34.0 40.0 28.0 41.0 48 35.05791656140124 37.0 34.0 40.0 28.0 41.0 49 35.05924622991488 37.0 34.0 40.0 28.0 41.0 50 34.86142004798204 36.0 33.0 40.0 27.0 41.0 51 33.74322581380462 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 6.0 11 18.0 12 15.0 13 21.0 14 22.0 15 45.0 16 75.0 17 177.0 18 296.0 19 536.0 20 855.0 21 1299.0 22 1958.0 23 2754.0 24 3877.0 25 5079.0 26 6526.0 27 8568.0 28 10544.0 29 13257.0 30 16832.0 31 21626.0 32 27571.0 33 36729.0 34 49365.0 35 49612.0 36 60391.0 37 76579.0 38 89198.0 39 42614.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.005366162215758 4.9765693412632235 52.61460317942736 17.40346131709365 2 20.959374827855413 4.211060182696453 52.74035183028871 22.08921315915942 3 23.844945455098042 4.179907948948327 50.699310661852 21.27583593410163 4 20.935060889320294 5.242503043991133 45.29572777506567 28.5267082916229 5 19.154064891622518 6.243743434761714 48.91204622687564 25.690145446740125 6 23.238426660233603 6.966323295602406 51.35065828089057 18.444591763273415 7 84.81879467448765 2.7997120317904747 8.348988597142732 4.032504696579143 8 86.10306450601864 3.263006532471455 6.129771847878324 4.504157113631572 9 80.10853894124195 5.972491057979246 8.179550837976093 5.739419162802713 10 43.197700813187275 26.320028416915665 16.371638550509356 14.110632219387705 11 33.51182550190238 25.129975097208266 22.9189263116705 18.439273089218858 12 29.874992164453403 21.95301711283377 28.314531187374985 19.85745953533784 13 27.104152934673387 23.290283732265546 29.17824586330628 20.42731746975479 14 21.083033999623893 25.23349928862735 32.0672356381554 21.616231073593354 15 20.17657997861133 24.045345495368004 34.55618514304384 21.221889382976826 16 25.066720866487984 23.47529760830625 30.369248946237704 21.088732578968063 17 25.0469657914282 22.912088016457496 27.71048177689302 24.330464415221282 18 25.30834063068077 23.1341426582353 29.769758399231073 21.787758311852855 19 26.219543467813473 24.76868516678792 27.093895491853882 21.917875873544727 20 26.87070113420724 27.041468561887523 27.259534198124406 18.82829610578083 21 26.918759153343068 25.0705199193841 28.160099687147994 19.850621240124834 22 24.534473555742554 23.147629296016504 29.580375612359838 22.737521535881104 23 23.256092256200528 25.066530913843177 29.30551413532606 22.37186269463023 24 23.753958138236136 25.145741166727138 28.668412964647917 22.431887730388812 25 24.15513812406567 25.311949730932078 26.571145813348735 23.961766331653518 26 22.333682213024293 26.293814951932482 26.155719379158775 25.21678345588445 27 22.765444574667534 24.85378395166085 28.832722002404797 23.548049471266815 28 20.000873782166106 26.56829652367665 29.281960007370163 24.148869686787084 29 22.018360822646915 25.999768257773336 27.768797238848354 24.21307368073139 30 23.205754805327032 24.129114611727296 29.31767110459362 23.347459478352047 31 24.175083151770263 25.980583040647964 26.945732428905472 22.898601378676293 32 25.592509787310025 26.15381985271072 25.596308840206138 22.65736151977312 33 24.86518111034919 25.068430440291234 26.42108322395227 23.645305225407306 34 21.829357941065293 25.503232044251366 29.49717635393496 23.170233660748377 35 22.158735827158292 26.264182339342803 27.30455297494335 24.27252885855556 36 23.4399664163724 26.316039411374742 26.127036529793124 24.116957642459735 37 22.127013735475746 27.826542842869273 26.43646938818153 23.609974033473456 38 23.1172368728476 27.090856249536994 26.342062923713115 23.449843953902292 39 22.968883857254387 24.95255932695979 27.039379082794657 25.039177732991163 40 23.7796017452849 24.558027683698455 28.02960222016651 23.632768350850135 41 19.610331144445688 26.013824753488958 27.32373819206872 27.052105909996637 42 21.021299390062058 25.169675199972648 27.801089188465316 26.00793622149998 43 21.67530634612791 24.022361225346522 28.210247185376687 26.092085243148883 44 22.86137066029439 24.270059474173088 27.848387397021924 25.020182468510598 45 21.835816330988685 24.370544423275277 26.318888701046827 27.474750544689208 46 21.306608262560147 25.34386177525943 27.4711414444379 25.87838851774253 47 19.710816093547876 26.658334077314528 29.385484198789243 24.245365630348353 48 20.354565606794225 26.30274272623835 28.86843309962826 24.474258567339163 49 22.262829876511788 24.23301870843599 29.38529424614444 24.11885716890779 50 20.873706185048068 25.58738106590027 27.489756803628858 26.049155945422807 51 20.25104141537515 25.625181642216592 26.064922014941676 28.05885492746658 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 69.0 1 249.0 2 429.0 3 696.5 4 964.0 5 771.5 6 579.0 7 604.0 8 629.0 9 653.5 10 678.0 11 680.0 12 682.0 13 781.5 14 881.0 15 901.5 16 922.0 17 898.5 18 875.0 19 1023.0 20 1171.0 21 1339.0 22 1507.0 23 1800.0 24 2093.0 25 2527.5 26 3685.5 27 4409.0 28 4953.5 29 5498.0 30 7093.0 31 8688.0 32 9439.5 33 10191.0 34 12219.5 35 14248.0 36 15777.0 37 17306.0 38 18680.0 39 20054.0 40 21908.5 41 23763.0 42 26417.0 43 29071.0 44 31110.0 45 33149.0 46 36618.5 47 40088.0 48 43543.0 49 46998.0 50 46296.5 51 45595.0 52 41755.5 53 37916.0 54 36333.0 55 34750.0 56 32655.0 57 30560.0 58 29386.5 59 28213.0 60 25564.5 61 22916.0 62 20300.0 63 17684.0 64 15833.0 65 13982.0 66 11939.0 67 9896.0 68 8280.0 69 6664.0 70 5455.5 71 4247.0 72 3432.0 73 2617.0 74 2112.0 75 1372.5 76 1138.0 77 809.0 78 480.0 79 306.5 80 133.0 81 117.0 82 101.0 83 57.5 84 14.0 85 20.0 86 26.0 87 15.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 526447.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.512238224355926 #Duplication Level Percentage of deduplicated Percentage of total 1 74.46642300405712 24.955365074276205 2 8.805574134338864 5.901889961843816 3 2.9519201993951207 2.9677635882425264 4 1.633865882037868 2.1901801066200184 5 1.1182571834423813 1.8737650563809187 6 0.8808831369220104 1.7712219319409015 7 0.7716722366527898 1.81023246780809 8 0.6662708784420043 1.786258272023947 9 0.6683538545275305 2.0158230231983816 >10 7.916756345882633 49.84499642855284 >50 0.08326964556816124 1.9083528004587205 >100 0.03330785822726447 1.9591600956706094 >500 0.0028713670885572823 0.8175355684095038 >1k 5.742734177114564E-4 0.19745562457348184 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 1026 0.19489141357059686 Illumina PCR Primer Index 2 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 945 0.1795052493413392 Illumina PCR Primer Index 2 (95% over 24bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 895 0.17000761710105672 No Hit CTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGCT 877 0.16658846949455502 Illumina PCR Primer Index 2 (96% over 25bp) TCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 831 0.1578506478334951 Illumina PCR Primer Index 2 (95% over 24bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 700 0.13296685136395497 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8995264480564994E-4 0.0 0.0 0.18957273951603865 0.0 2 1.8995264480564994E-4 0.0 0.0 0.7985609187629524 0.0 3 1.8995264480564994E-4 0.0 0.0 1.0329624824531245 0.0 4 1.8995264480564994E-4 0.0 0.0 1.4565568803697237 0.0 5 1.8995264480564994E-4 0.0 0.0 2.158621855571406 0.0 6 1.8995264480564994E-4 0.0 0.0 2.549734351226239 0.0 7 1.8995264480564994E-4 0.0 0.0 2.9558531058207187 0.0 8 1.8995264480564994E-4 0.0 0.0 3.569400148542968 0.0 9 1.8995264480564994E-4 0.0 0.0 3.8395128094566027 0.0 10 1.8995264480564994E-4 0.0 0.0 4.3681510199507265 0.0 11 1.8995264480564994E-4 0.0 0.0 5.359513873191413 0.0 12 1.8995264480564994E-4 0.0 0.0 6.341379094191818 0.0 13 1.8995264480564994E-4 0.0 0.0 6.665628258875063 0.0 14 1.8995264480564994E-4 0.0 0.0 6.795745820566933 0.0 15 1.8995264480564994E-4 0.0 0.0 6.996525766126505 0.0 16 1.8995264480564994E-4 0.0 0.0 7.425438838097662 0.0 17 1.8995264480564994E-4 0.0 0.0 7.995866630449029 0.0 18 1.8995264480564994E-4 0.0 0.0 8.635627138154458 0.0 19 1.8995264480564994E-4 0.0 0.0 9.089613959239962 0.0 20 1.8995264480564994E-4 0.0 0.0 9.588429604499598 0.0 21 1.8995264480564994E-4 0.0 0.0 10.222301580216053 0.0 22 1.8995264480564994E-4 0.0 0.0 10.930634992696321 0.0 23 1.8995264480564994E-4 0.0 0.0 11.562037584030302 0.0 24 1.8995264480564994E-4 0.0 0.0 12.059713513421103 0.0 25 1.8995264480564994E-4 0.0 0.0 12.583223002505475 0.0 26 1.8995264480564994E-4 0.0 0.0 13.024672949033805 0.0 27 1.8995264480564994E-4 0.0 0.0 13.488157402359592 0.0 28 1.8995264480564994E-4 0.0 0.0 13.958480150898382 0.0 29 3.799052896112999E-4 0.0 0.0 14.457675701447629 0.0 30 3.799052896112999E-4 0.0 0.0 15.106174030814119 0.0 31 3.799052896112999E-4 0.0 0.0 15.618096408565345 0.0 32 3.799052896112999E-4 0.0 0.0 16.12394030168279 0.0 33 3.799052896112999E-4 0.0 0.0 16.629784194800237 0.0 34 3.799052896112999E-4 0.0 0.0 17.175138238037256 0.0 35 3.799052896112999E-4 0.0 0.0 17.775578548267916 0.0 36 3.799052896112999E-4 0.0 0.0 18.313714391002325 0.0 37 3.799052896112999E-4 0.0 0.0 18.83304492190097 0.0 38 3.799052896112999E-4 0.0 0.0 19.429306273945905 0.0 39 3.799052896112999E-4 0.0 0.0 20.37887954532935 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 25 3.8879138E-5 45.000004 21 TATAACG 25 3.8879138E-5 45.000004 23 GCATCGC 25 3.8879138E-5 45.000004 22 TCGTTTA 20 7.0298003E-4 45.0 38 CGAGTAA 20 7.0298003E-4 45.0 33 TTATGCG 20 7.0298003E-4 45.0 1 TACGGGA 35 1.2102464E-7 45.0 4 GCCGATA 20 7.0298003E-4 45.0 37 TCGAGTA 20 7.0298003E-4 45.0 32 CTTACCG 20 7.0298003E-4 45.0 1 TTTGTCG 220 0.0 41.93182 1 CTTCGTG 50 1.0786607E-9 40.500004 1 CGCTTGG 190 0.0 40.26316 2 TCGTTTG 235 0.0 40.212765 1 TTACACG 270 0.0 40.000004 34 ACACGCG 260 0.0 39.807693 36 TTACGGG 85 0.0 39.705883 3 TCGGCGT 145 0.0 38.793102 4 GCGATCT 180 0.0 38.750004 9 ACACGAC 105 0.0 38.57143 26 >>END_MODULE