##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934016.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 969197 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.92374512096096 31.0 30.0 31.0 25.0 34.0 2 30.042962369879394 31.0 30.0 33.0 25.0 34.0 3 30.114187311764276 31.0 30.0 33.0 25.0 34.0 4 33.90872443889116 35.0 33.0 37.0 28.0 37.0 5 34.39211223311669 35.0 35.0 37.0 32.0 37.0 6 33.78877668833065 35.0 35.0 37.0 29.0 37.0 7 34.33205426760504 35.0 35.0 37.0 32.0 37.0 8 34.311580617769145 35.0 35.0 37.0 31.0 37.0 9 35.820256356550836 37.0 35.0 39.0 31.0 39.0 10 35.32151358289388 37.0 34.0 39.0 30.0 39.0 11 35.43478260869565 37.0 35.0 39.0 30.0 39.0 12 35.40190178054616 37.0 35.0 39.0 30.0 39.0 13 35.31392585821045 37.0 35.0 39.0 30.0 39.0 14 35.913512939061924 38.0 34.0 40.0 27.0 41.0 15 36.15087541542122 38.0 34.0 40.0 29.0 41.0 16 36.379636957192396 38.0 35.0 40.0 30.0 41.0 17 36.10031603482058 38.0 34.0 40.0 30.0 41.0 18 36.27475528710881 38.0 35.0 40.0 30.0 41.0 19 36.227124103768375 38.0 34.0 40.0 30.0 41.0 20 36.151339717312375 38.0 34.0 40.0 30.0 41.0 21 35.915198870817804 38.0 34.0 40.0 29.0 41.0 22 36.12490649475803 38.0 34.0 40.0 30.0 41.0 23 36.16803188619032 38.0 34.0 40.0 30.0 41.0 24 36.10042437192851 38.0 34.0 40.0 30.0 41.0 25 35.706090712208145 38.0 34.0 40.0 29.0 41.0 26 35.79338256309089 38.0 34.0 40.0 29.0 41.0 27 35.77668833064898 38.0 34.0 40.0 29.0 41.0 28 35.61190449413277 38.0 34.0 40.0 29.0 41.0 29 35.720694554357884 38.0 34.0 40.0 29.0 41.0 30 35.24807030975127 38.0 34.0 40.0 27.0 41.0 31 35.37680471565636 38.0 34.0 40.0 28.0 41.0 32 35.35129803332037 38.0 34.0 40.0 27.0 41.0 33 35.29001224725211 38.0 34.0 40.0 27.0 41.0 34 35.175886842406655 38.0 34.0 40.0 27.0 41.0 35 35.20203322957046 38.0 34.0 40.0 27.0 41.0 36 34.96101721321878 37.0 33.0 40.0 26.0 41.0 37 34.95723779582479 37.0 33.0 40.0 26.0 41.0 38 34.78376325968817 37.0 33.0 40.0 25.0 41.0 39 34.72606601134754 37.0 33.0 40.0 26.0 41.0 40 34.606926146077626 37.0 33.0 40.0 25.0 41.0 41 34.53126247811333 37.0 33.0 40.0 25.0 41.0 42 34.73474948849408 37.0 33.0 40.0 26.0 41.0 43 34.70088021320743 37.0 33.0 40.0 26.0 41.0 44 34.717870567077696 37.0 33.0 40.0 26.0 41.0 45 34.70343490539075 37.0 33.0 40.0 26.0 41.0 46 34.60389992952929 36.0 33.0 40.0 26.0 41.0 47 34.47276043982802 36.0 33.0 40.0 26.0 41.0 48 34.469730096151764 36.0 33.0 40.0 26.0 41.0 49 34.46689888639771 36.0 33.0 40.0 26.0 41.0 50 34.24861302707293 36.0 33.0 40.0 26.0 41.0 51 33.15590741613934 35.0 31.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 9.0 10 6.0 11 14.0 12 15.0 13 25.0 14 39.0 15 77.0 16 147.0 17 304.0 18 545.0 19 1244.0 20 2329.0 21 3669.0 22 5293.0 23 7369.0 24 9467.0 25 11459.0 26 13412.0 27 16589.0 28 20257.0 29 25529.0 30 32359.0 31 40404.0 32 51499.0 33 66882.0 34 88895.0 35 91060.0 36 109724.0 37 136976.0 38 158003.0 39 75594.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.275675636635277 4.386105198427152 50.85550202899927 16.48271713593831 2 21.14750664725541 7.830502983397595 50.00417871702037 21.017811652326618 3 22.683210946794098 7.798311385610974 48.545032640422946 20.973445027171977 4 19.868303348029347 5.070279829590888 48.337128571384355 26.72428825099541 5 21.577450198463264 6.059758748737357 47.469296747720016 24.893494305079358 6 22.369239690176506 9.714330523103145 50.00624228098106 17.910187505739287 7 81.10683380159038 2.667672310170172 12.100429530838417 4.1250643574010235 8 82.7205408188428 6.027670329148769 6.899216567942328 4.352572284066087 9 77.43730118850966 4.9257271741451945 8.77086908027986 8.866102557065282 10 43.81833621028542 26.090774115066388 16.033995152688256 14.056894521959931 11 34.520742429041775 23.981399034458423 23.400196244932662 18.097662291567143 12 28.563542809150256 21.621816823617902 28.037540355572705 21.777100011659137 13 27.29775267566862 21.736241445237656 30.6361864512581 20.32981942783562 14 21.800830997206965 25.020713023255336 31.633197378861055 21.545258600676643 15 20.33487515953929 22.595819013059266 34.34688716535441 22.722418662047033 16 24.679090009564618 23.119551546280064 28.996994419091273 23.20436402506405 17 24.603769924999767 24.698900223587156 28.300232047767377 22.3970978036457 18 25.772366195933333 22.46932254226953 29.073243107438422 22.68506815435871 19 25.09004877233421 24.784434949757376 26.850578365389076 23.274937912519334 20 27.727902583272545 26.083448463005972 27.949735709045736 18.238913244675746 21 26.08396435399614 27.415994890615636 27.811476923680118 18.688563831708105 22 24.514830318294422 21.875532012583612 31.300034977409137 22.30960269171283 23 24.350776983420293 25.311159650721166 29.033416322997287 21.304647042861255 24 23.657832205423666 25.37079664918484 28.555907622495734 22.41546352289576 25 23.545574325962626 27.93642572149934 25.171146835988967 23.34685311654906 26 22.57704058101707 25.23749041732486 27.793523917222196 24.39194508443588 27 24.017924116562476 24.713757884104055 28.132154763169925 23.136163236163547 28 20.37501147857453 27.963974300374435 28.405576987960135 23.2554372330909 29 24.417945990340456 24.785054018945583 28.096970997640312 22.700028993073648 30 24.641429967282193 25.490999249894504 28.774129511337737 21.09344127148557 31 24.977584536477103 25.06146841147878 26.794552603856598 23.166394448187518 32 27.86843128899491 25.635551905340193 25.624099125358413 20.87191768030648 33 26.71706577713303 23.770605975874872 25.906910566169728 23.60541768082237 34 23.414434836261357 24.836024048774398 29.087584876965156 22.661956237999085 35 24.851603956677536 26.370696566332747 26.516384181956816 22.261315295032897 36 25.197663632883717 28.665379690609853 24.49935358858932 21.63760308791711 37 24.742544601355554 26.741106297274957 26.022366969769823 22.493982131599665 38 23.24305584932681 27.260918058970468 26.04052633262381 23.455499759078908 39 24.083751806908193 24.843143344438747 27.006790157212617 24.06631469144044 40 24.177953501713272 23.832203360101197 28.772581838367227 23.217261299818304 41 20.940737538395187 24.869453784937427 27.74699054990884 26.442818126758542 42 22.959418982931233 24.73831429523616 27.857700756399367 24.44456596543324 43 22.84757381626233 24.024940234028787 27.47635413646555 25.65113181324333 44 24.446423172997854 23.49512018712398 27.778047187517092 24.28040945236108 45 23.51451768835438 23.447348681434217 26.56013173792325 26.478001892288148 46 23.983153063825004 24.901026313535844 27.021750995927558 24.094069626711597 47 20.630480696906822 26.401340491148854 30.471823581789874 22.496355230154446 48 21.669278794713563 26.80487042366 28.45004679131281 23.07580399031363 49 23.852013574123735 24.148444537075537 29.038265698304887 22.961276190495845 50 21.982218269350813 24.898756393179095 27.881947632937372 25.237077704532723 51 21.479430910330922 24.326530106882295 27.26999774039746 26.92404124238932 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 154.0 1 395.5 2 637.0 3 2267.5 4 3898.0 5 2795.0 6 1692.0 7 1685.0 8 1678.0 9 1761.0 10 1844.0 11 1815.5 12 1787.0 13 1793.5 14 1800.0 15 1807.5 16 1815.0 17 1958.5 18 2102.0 19 2102.5 20 2103.0 21 2347.5 22 2592.0 23 3055.0 24 3518.0 25 4288.0 26 6787.0 27 8516.0 28 9549.0 29 10582.0 30 13039.0 31 15496.0 32 17990.0 33 20484.0 34 23343.0 35 26202.0 36 27823.5 37 29445.0 38 31586.5 39 33728.0 40 36759.0 41 39790.0 42 42545.0 43 45300.0 44 49604.5 45 53909.0 46 68949.5 47 83990.0 48 84106.5 49 84223.0 50 82871.5 51 81520.0 52 77043.5 53 72567.0 54 69218.0 55 65869.0 56 63348.5 57 60828.0 58 57163.0 59 53498.0 60 47697.5 61 41897.0 62 37643.5 63 33390.0 64 30105.5 65 26821.0 66 22184.0 67 17547.0 68 14973.5 69 12400.0 70 10318.0 71 8236.0 72 6881.0 73 5526.0 74 4388.0 75 2586.0 76 1922.0 77 1372.5 78 823.0 79 663.5 80 504.0 81 337.5 82 171.0 83 115.5 84 60.0 85 33.0 86 6.0 87 10.0 88 14.0 89 7.5 90 1.0 91 1.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 969197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.57931026385228 #Duplication Level Percentage of deduplicated Percentage of total 1 74.23734953617075 23.443642941687866 2 8.657253573762546 5.467801932773827 3 2.958030576077946 2.8023769599578148 4 1.6089718016644172 2.032408789222001 5 1.1195597774009227 1.7677462784736562 6 0.8862582875174805 1.679245526125495 7 0.7963675698276209 1.760411700015954 8 0.7357262403269261 1.8586981770033237 9 0.6720127112730042 1.9099528119488502 >10 8.158071164899143 48.423127472822515 >50 0.11304668244991141 2.409340139042308 >100 0.05039026561649959 2.7219431339920357 >500 0.003315149053709569 0.866834198054729 >1k 0.0029836341483386116 1.7274916789977155 >5k 6.630298107419137E-4 1.128978259881908 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGC 5514 0.568924583959711 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCG 5270 0.5437491036394045 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 3548 0.3660762466247832 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2259 0.23307954935890227 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAGTTACT 2203 0.2273015702689959 No Hit GCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 1962 0.2024356245427916 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1614 0.16652961162694477 No Hit CCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 1550 0.15992620695276605 No Hit CTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCT 1258 0.12979817312682562 TruSeq Adapter, Index 27 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAGTTACTCGTA 1080 0.11143245387676604 No Hit TCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 1027 0.10596400938096176 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14702893219851074 0.0 2 0.0 0.0 0.0 0.6846905221539068 0.0 3 0.0 0.0 0.0 0.9022933418077027 0.0 4 0.0 0.0 0.0 1.3401816142641796 0.0 5 0.0 0.0 0.0 2.3764002571200695 0.0 6 0.0 0.0 0.0 2.848750047719917 0.0 7 0.0 0.0 0.0 3.355251821869032 0.0 8 0.0 0.0 0.0 4.046545748697118 0.0 9 0.0 0.0 0.0 4.386105198427152 0.0 10 0.0 0.0 0.0 5.573479901402914 0.0 11 0.0 0.0 0.0 6.536648380050702 0.0 12 0.0 0.0 0.0 8.031390934969878 0.0 13 0.0 0.0 0.0 8.376934720185886 0.0 14 0.0 0.0 0.0 8.54140076785215 0.0 15 0.0 0.0 0.0 8.864245349500669 0.0 16 0.0 0.0 0.0 9.273243726507614 0.0 17 0.0 0.0 0.0 9.778404184082287 0.0 18 0.0 0.0 0.0 10.284183710845163 0.0 19 0.0 0.0 0.0 10.934515893053733 0.0 20 0.0 0.0 0.0 11.362499058498942 0.0 21 0.0 0.0 0.0 11.91625644734765 0.0 22 0.0 0.0 0.0 12.512523253786382 0.0 23 1.0317819803404261E-4 0.0 0.0 13.096924567451198 0.0 24 2.0635639606808522E-4 0.0 0.0 13.547710114661932 0.0 25 2.0635639606808522E-4 0.0 0.0 13.988590554861396 0.0 26 3.095345941021278E-4 0.0 0.0 14.37612786667726 0.0 27 3.095345941021278E-4 0.0 0.0 14.815047921114077 0.0 28 3.095345941021278E-4 0.0 0.0 15.21785560623898 0.0 29 3.095345941021278E-4 0.0 0.0 15.676895409292435 0.0 30 3.095345941021278E-4 0.0 0.0 16.2490185173912 0.0 31 3.095345941021278E-4 0.0 0.0 16.696296005868774 0.0 32 3.095345941021278E-4 0.0 0.0 17.15244681937728 0.0 33 4.1271279213617043E-4 0.0 0.0 17.604470504964418 0.0 34 4.1271279213617043E-4 0.0 0.0 18.091368421487065 0.0 35 4.1271279213617043E-4 0.0 0.0 18.64223682079082 0.0 36 4.1271279213617043E-4 0.0 0.0 19.1140707204005 0.0 37 4.1271279213617043E-4 0.0 0.0 19.592817559278455 0.0 38 4.1271279213617043E-4 0.0 0.0 20.153797421989545 0.0 39 4.1271279213617043E-4 0.0 0.0 21.039479073913764 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTCGA 145 0.0 41.89655 41 TACGGCT 800 0.0 40.78125 7 CGATGAA 1305 0.0 40.689655 19 CACTCGA 50 1.0804797E-9 40.5 41 CGATCGA 50 1.0804797E-9 40.5 41 TCGAATA 50 1.0804797E-9 40.5 44 CCGATGA 1330 0.0 39.924812 18 TTAATCG 40 3.4574805E-7 39.375 20 CGTTTTT 1605 0.0 38.971962 1 GATGAAT 1585 0.0 38.753944 20 GACCGAT 395 0.0 38.734177 9 TTTGGGC 1780 0.0 38.300564 4 CTCGAAT 160 0.0 37.96875 43 ATGAATG 1630 0.0 37.684048 21 CGATCAA 30 1.1397897E-4 37.500004 41 TGAATGA 1615 0.0 37.47678 22 TTTGGGA 3785 0.0 37.450462 4 TTGGGAC 1440 0.0 37.1875 5 ACGGCTG 890 0.0 37.16292 8 TCGAATG 140 0.0 36.964283 44 >>END_MODULE