##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934014.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 181637 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.06388015657603 31.0 30.0 31.0 26.0 34.0 2 30.415895439805766 31.0 30.0 33.0 27.0 34.0 3 30.42201203499287 31.0 30.0 34.0 26.0 34.0 4 34.07174749638014 35.0 33.0 37.0 30.0 37.0 5 34.46842328380231 35.0 35.0 37.0 32.0 37.0 6 34.0081866580047 35.0 35.0 37.0 30.0 37.0 7 34.5056954254915 35.0 35.0 37.0 32.0 37.0 8 34.55548153735197 35.0 35.0 37.0 32.0 37.0 9 35.855040547905986 37.0 35.0 39.0 30.0 39.0 10 35.302625566376896 37.0 34.0 39.0 30.0 39.0 11 35.480854671680326 37.0 35.0 39.0 30.0 39.0 12 35.34671350000275 37.0 34.0 39.0 30.0 39.0 13 35.20066396163777 37.0 34.0 39.0 30.0 39.0 14 35.82297109069187 38.0 34.0 40.0 27.0 41.0 15 36.194360179919286 38.0 34.0 40.0 30.0 41.0 16 36.41122678749374 38.0 35.0 40.0 31.0 41.0 17 36.21073349592869 38.0 34.0 40.0 30.0 41.0 18 36.28531081222438 38.0 35.0 40.0 30.0 41.0 19 36.3019483915722 38.0 34.0 40.0 30.0 41.0 20 36.366125844403946 38.0 34.0 40.0 30.0 41.0 21 36.03469557413963 38.0 34.0 40.0 30.0 41.0 22 36.182721582056516 38.0 34.0 40.0 30.0 41.0 23 36.3335939263476 38.0 34.0 40.0 30.0 41.0 24 36.282756266619685 38.0 35.0 40.0 30.0 41.0 25 35.809680846964 38.0 34.0 40.0 29.0 41.0 26 35.900983830386984 38.0 34.0 40.0 30.0 41.0 27 35.98930834576656 38.0 34.0 40.0 30.0 41.0 28 35.851517036727095 38.0 34.0 40.0 29.0 41.0 29 36.01458403298887 38.0 34.0 40.0 30.0 41.0 30 35.56533635768043 38.0 34.0 40.0 29.0 41.0 31 35.686346944730424 38.0 34.0 40.0 29.0 41.0 32 35.76311544454048 38.0 34.0 40.0 29.0 41.0 33 35.76132065603374 38.0 34.0 40.0 29.0 41.0 34 35.75768152964429 38.0 34.0 40.0 29.0 41.0 35 35.820752379746416 38.0 34.0 40.0 29.0 41.0 36 35.63701778822597 38.0 34.0 40.0 29.0 41.0 37 35.660592280207226 38.0 34.0 40.0 29.0 41.0 38 35.57128778828102 38.0 34.0 40.0 29.0 41.0 39 35.560926463220596 38.0 34.0 40.0 29.0 41.0 40 35.471632982266826 38.0 34.0 40.0 29.0 41.0 41 35.37223693410483 37.0 34.0 40.0 28.0 41.0 42 35.624685499099854 38.0 34.0 40.0 29.0 41.0 43 35.58582777738016 38.0 34.0 40.0 29.0 41.0 44 35.53873384827981 37.0 34.0 40.0 29.0 41.0 45 35.619851682201315 38.0 34.0 40.0 29.0 41.0 46 35.500624872685634 37.0 34.0 40.0 29.0 41.0 47 35.44520114293894 37.0 34.0 40.0 29.0 41.0 48 35.50037712580586 37.0 34.0 40.0 29.0 41.0 49 35.532655791496225 37.0 34.0 40.0 29.0 41.0 50 35.386760406745324 37.0 34.0 40.0 29.0 41.0 51 34.26120228808007 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 4.0 11 4.0 12 3.0 13 2.0 14 7.0 15 9.0 16 14.0 17 33.0 18 64.0 19 115.0 20 208.0 21 327.0 22 466.0 23 752.0 24 1026.0 25 1466.0 26 1861.0 27 2541.0 28 3283.0 29 4244.0 30 5528.0 31 7295.0 32 9411.0 33 12720.0 34 18037.0 35 17873.0 36 20825.0 37 26627.0 38 31773.0 39 15116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.55817922559831 4.884467371735935 55.382438600064965 17.174914802600792 2 21.3282536047171 3.9810170835237315 53.39605917296586 21.294670138793308 3 21.6172916311104 4.097182842702753 52.836151224695406 21.449374301491435 4 20.054834642721474 4.778211487747541 47.5277614142493 27.639192455281687 5 18.332168005417397 5.785164916839631 51.285255757362215 24.59741132038076 6 22.524595759674515 6.626403210799562 52.185953302465904 18.663047727060015 7 83.2875460396285 2.4752666031700588 9.134152182650011 5.10303517455144 8 83.48023805722403 3.670507660884071 7.009034502882122 5.840219779009783 9 76.60113302906346 6.364342066869636 10.369583289748235 6.664941614318669 10 39.52608774643932 27.48944323017887 17.772260057146948 15.212208966234853 11 33.26084443147597 24.806619796627338 24.436651122843912 17.49588464905278 12 29.963608736105527 21.409184252107224 29.76871452402319 18.858492487764057 13 23.65597317727115 27.930983224783496 29.424071086838033 18.98897251110732 14 19.526307965888005 29.496192956280936 29.066214482732043 21.911284595099016 15 16.163556984535088 26.356414166717133 38.44315860755243 19.03687024119535 16 19.533465097970126 23.477044875218155 35.169596502915155 21.819893523896564 17 19.790020755683038 23.156625577387867 29.513810512175382 27.53954315475371 18 21.193369192400226 23.784251006127608 31.813452105022655 23.20892769644951 19 24.24395910524838 25.471131983021078 28.18863997973981 22.09626893199073 20 27.490544327422278 26.13784636390163 28.411612171528926 17.95999713714717 21 24.612826681788402 27.2818863997974 27.212517273463003 20.892769644951194 22 22.15187434278258 25.32083220929656 28.303154093053728 24.224139354867123 23 21.366792008236207 26.633340123433 27.67497811569229 24.324889752638505 24 22.97714672671317 23.390608741611015 29.833128712762267 23.799115818913545 25 19.52795961175311 25.59225267979542 29.237435104081218 25.642352604370256 26 18.893177050931254 28.277828856455457 29.710906918744527 23.11808717386876 27 21.397622731051495 28.316367259974562 28.72872817762901 21.557281831344934 28 18.276012046003842 27.504308042964816 32.50879501423169 21.710884896799662 29 18.45108650770493 25.27899051404725 32.99933383616774 23.270589142080084 30 21.079405627708013 26.832638724488955 30.47286621117944 21.615089436623595 31 22.827948050232056 28.82287199193997 26.71647296530993 21.632706992518045 32 22.68590650583306 27.08368889598485 27.169023932348583 23.061380665833504 33 22.419440972929525 26.761617952289456 27.678281407422496 23.140659667358523 34 20.10548511591801 25.815224871584537 29.716412404961545 24.36287760753591 35 19.567599112515623 24.589153091055234 30.056100904551386 25.787146891877754 36 21.7604342727528 26.435693168242153 28.937386105253886 22.866486453751165 37 20.442971421021046 28.839388450591013 29.15650445669109 21.561135671696846 38 19.475657492691468 28.182033396279394 28.06696873434377 24.275340376685367 39 19.784515269466024 25.73429422419441 31.02781922185458 23.453371284484987 40 20.795873087531724 25.44855948953132 29.917362651882602 23.838204771054354 41 17.391830959551193 25.740900807654825 28.251402522613784 28.615865710180195 42 20.39672533679812 24.019885816215858 27.74875163100029 27.83463721598573 43 21.5798543248347 23.848665194866683 27.830232827012118 26.7412476532865 44 19.483915722016988 24.98389645281523 29.62447078513739 25.90771704003039 45 19.765246067706467 25.40947053739051 28.54979987557601 26.275483519327008 46 21.020496925185945 26.28979778349125 29.950946117806392 22.73875917351641 47 17.869156614566414 26.18629464261136 31.67801714408408 24.26653159873814 48 18.652036754625982 23.447315249646273 31.497987744787682 26.402660250940063 49 19.747077963190318 22.4827540644252 33.242125778338114 24.528042194046368 50 19.45859048541872 23.490808590760693 31.159950891062945 25.890650032757645 51 17.258598193099424 24.18670204859142 28.117068658918615 30.437631099390543 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 96.0 2 159.0 3 233.5 4 308.0 5 251.0 6 194.0 7 209.0 8 224.0 9 281.5 10 339.0 11 328.0 12 317.0 13 341.5 14 366.0 15 371.0 16 376.0 17 357.5 18 339.0 19 388.5 20 438.0 21 466.0 22 494.0 23 618.5 24 743.0 25 845.0 26 1213.5 27 1480.0 28 2090.0 29 2700.0 30 2771.5 31 2843.0 32 3370.5 33 3898.0 34 4480.0 35 5062.0 36 5499.5 37 5937.0 38 6684.5 39 7432.0 40 9045.5 41 10659.0 42 12471.5 43 14284.0 44 16168.5 45 18053.0 46 19459.0 47 20865.0 48 19978.5 49 19092.0 50 16587.5 51 14083.0 52 12007.5 53 9932.0 54 9271.5 55 8611.0 56 7932.5 57 7254.0 58 6993.0 59 6732.0 60 6228.0 61 5724.0 62 4924.0 63 4124.0 64 3403.0 65 2682.0 66 2288.0 67 1894.0 68 1515.0 69 1136.0 70 943.5 71 751.0 72 641.0 73 531.0 74 432.0 75 232.5 76 132.0 77 82.0 78 32.0 79 45.5 80 59.0 81 37.0 82 15.0 83 21.5 84 28.0 85 15.0 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 181637.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.65711831840429 #Duplication Level Percentage of deduplicated Percentage of total 1 74.00877387827633 29.34974702290833 2 10.294035984007108 8.164636059833624 3 3.609506885828521 4.2942792492718995 4 1.9741226121723676 3.1315205602382776 5 1.2397267880941805 2.4581995958973115 6 0.9926143936028432 2.3618535870995445 7 0.8163038649489116 2.2660581269234794 8 0.7191248334073745 2.281473488331122 9 0.6510995113282986 2.3238657322021394 >10 5.5877943136383825 37.90086821517642 >50 0.06941359395824077 1.871865313785187 >100 0.03193025322079076 1.860303792729455 >500 0.0041648156374944475 1.1831289880365783 >1k 0.0013882718791648156 0.5522002675666301 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGC 1003 0.5522002675666301 RNA PCR Primer, Index 10 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGCT 823 0.4531015156603556 TruSeq Adapter, Index 10 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGC 682 0.3754741600004404 Illumina PCR Primer Index 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGC 644 0.35455331237578247 Illumina PCR Primer Index 2 (95% over 22bp) TGTCTGGGGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTA 264 0.14534483612920276 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGC 244 0.13433386369517225 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCG 223 0.1227723426394402 No Hit TTTTTCGGGCAGCCACCAATAAAGAAAGCGTTCAAGCTCAACATAAAATTT 190 0.10460423812328987 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4888871760709547 0.0 2 0.0 0.0 0.0 1.9170103007647121 0.0 3 0.0 0.0 0.0 2.4752666031700588 0.0 4 0.0 0.0 0.0 3.3324708071593343 0.0 5 0.0 0.0 0.0 4.756740091501181 0.0 6 0.0 0.0 0.0 5.462543424522536 0.0 7 0.0 0.0 0.0 6.194773091385565 0.0 8 0.0 0.0 0.0 7.363037266636203 0.0 9 0.0 0.0 0.0 7.877800227927129 0.0 10 0.0 0.0 0.0 9.00036886757654 0.0 11 0.0 0.0 0.0 10.87663857033534 0.0 12 0.0 0.0 0.0 12.776031315205602 0.0 13 0.0 0.0 0.0 13.339793103827965 0.0 14 0.0 0.0 0.0 13.508811530690332 0.0 15 0.0 0.0 0.0 13.888690079664386 0.0 16 0.0 0.0 0.0 14.705704234269449 0.0 17 0.0 0.0 0.0 16.025369280488007 0.0 18 0.0 0.0 0.0 17.514052753568933 0.0 19 0.0 0.0 0.0 18.323359227470174 0.0 20 0.0 0.0 0.0 19.175057945242433 0.0 21 0.0 0.0 0.0 20.257987084129336 0.0 22 0.0 0.0 0.0 21.33926457715113 0.0 23 0.0 0.0 0.0 22.36328501351597 0.0 24 0.0 0.0 0.0 23.144513507710432 0.0 25 0.0 0.0 0.0 23.88334975803388 0.0 26 0.0 0.0 0.0 24.53630042337189 0.0 27 0.0 0.0 0.0 25.126488545835926 0.0 28 0.0 0.0 0.0 25.754664523197366 0.0 29 0.0 0.0 0.0 26.427985487538333 0.0 30 0.0 0.0 0.0 27.265920489768053 0.0 31 0.0 0.0 0.0 28.037789657393592 0.0 32 0.0 0.0 0.0 28.766716032526414 0.0 33 0.0 0.0 0.0 29.477474303143083 0.0 34 5.505486217015255E-4 0.0 0.0 30.182727087542737 0.0 35 5.505486217015255E-4 0.0 0.0 30.950191866194665 0.0 36 5.505486217015255E-4 0.0 0.0 31.661500685433033 0.0 37 5.505486217015255E-4 0.0 0.0 32.352439205668446 0.0 38 5.505486217015255E-4 0.0 0.0 33.04502937176897 0.0 39 5.505486217015255E-4 0.0 0.0 33.77505684414519 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTGGGC 35 1.2043893E-7 45.000004 4 CTTGTCG 50 2.1827873E-11 45.0 1 CGGGTCT 20 7.0175895E-4 45.0 6 CGGGTAT 20 7.0175895E-4 45.0 6 CCGGGTA 20 7.0175895E-4 45.0 5 ACTTGAC 20 7.0175895E-4 45.0 41 TTGCTAG 20 7.0175895E-4 45.0 1 GGCGTTA 20 7.0175895E-4 45.0 20 TAGCGAA 20 7.0175895E-4 45.0 42 GGCAAAG 20 7.0175895E-4 45.0 8 GTTAGAC 20 7.0175895E-4 45.0 23 GTAGGCG 20 7.0175895E-4 45.0 17 TGACGGA 25 3.8777995E-5 45.0 20 GCGTTAG 20 7.0175895E-4 45.0 21 ACGGGAT 20 7.0175895E-4 45.0 5 CGTTAGA 20 7.0175895E-4 45.0 22 TACGAAA 25 3.8777995E-5 45.0 20 CTTGCAT 25 3.8777995E-5 45.0 30 TGACAAA 25 3.8777995E-5 45.0 11 GGAGTTA 20 7.0175895E-4 45.0 8 >>END_MODULE