##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934012.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 111545 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.217598278721592 31.0 30.0 31.0 27.0 34.0 2 30.554699896902594 31.0 30.0 33.0 27.0 34.0 3 30.64871576493792 31.0 31.0 34.0 27.0 34.0 4 34.19429826527411 35.0 33.0 37.0 30.0 37.0 5 34.542032363620066 35.0 35.0 37.0 32.0 37.0 6 34.11734277645793 35.0 35.0 37.0 30.0 37.0 7 34.495163386973864 35.0 35.0 37.0 32.0 37.0 8 34.833331839168046 35.0 35.0 37.0 32.0 37.0 9 36.09716258012461 38.0 35.0 39.0 31.0 39.0 10 35.445093908288136 37.0 35.0 39.0 30.0 39.0 11 35.488869962795285 37.0 35.0 39.0 30.0 39.0 12 35.22520955668116 37.0 34.0 39.0 30.0 39.0 13 34.96192568021875 37.0 34.0 39.0 27.0 39.0 14 35.58997713927115 38.0 34.0 40.0 27.0 41.0 15 36.088654802994306 38.0 34.0 40.0 30.0 41.0 16 36.309668743556415 38.0 34.0 40.0 31.0 41.0 17 36.179335694114485 38.0 34.0 40.0 30.0 41.0 18 36.244959433412525 38.0 35.0 40.0 30.0 41.0 19 36.21126899457618 38.0 35.0 40.0 30.0 41.0 20 36.280550450490836 38.0 34.0 40.0 30.0 41.0 21 35.917405531399886 38.0 34.0 40.0 30.0 41.0 22 36.07788784795374 38.0 34.0 40.0 30.0 41.0 23 36.214299161773276 38.0 34.0 40.0 30.0 41.0 24 36.13671612353759 38.0 34.0 40.0 30.0 41.0 25 35.66487964498633 37.0 34.0 40.0 29.0 41.0 26 35.751015285310864 38.0 34.0 40.0 30.0 41.0 27 35.763028374198754 38.0 34.0 40.0 30.0 41.0 28 35.6250123268636 37.0 34.0 40.0 29.0 41.0 29 35.8259895109597 38.0 34.0 40.0 30.0 41.0 30 35.3798377336501 37.0 34.0 40.0 29.0 41.0 31 35.51158725178179 37.0 34.0 40.0 29.0 41.0 32 35.57331121968712 37.0 34.0 40.0 29.0 41.0 33 35.562696669505584 37.0 34.0 40.0 29.0 41.0 34 35.584768479089156 37.0 34.0 40.0 29.0 41.0 35 35.55827692859384 37.0 34.0 40.0 29.0 41.0 36 35.34191581872787 37.0 34.0 40.0 29.0 41.0 37 35.32706979246044 37.0 34.0 40.0 29.0 41.0 38 35.18853377560626 37.0 34.0 40.0 28.0 41.0 39 35.19373347079654 37.0 34.0 40.0 28.0 41.0 40 35.07144201891613 37.0 34.0 40.0 28.0 41.0 41 35.00742301313371 37.0 34.0 40.0 28.0 41.0 42 35.21484602626742 37.0 34.0 40.0 29.0 41.0 43 35.173867049172976 37.0 34.0 40.0 29.0 41.0 44 35.080729750324984 36.0 34.0 40.0 28.0 41.0 45 35.18631045766283 36.0 34.0 40.0 29.0 41.0 46 35.07935810659375 36.0 34.0 40.0 28.0 41.0 47 35.0250212918553 36.0 34.0 40.0 28.0 41.0 48 34.997095342686805 36.0 34.0 40.0 28.0 41.0 49 35.0348469227666 36.0 34.0 40.0 28.0 41.0 50 34.84813304047694 36.0 34.0 39.0 28.0 41.0 51 33.70753507553005 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 3.0 12 4.0 13 2.0 14 2.0 15 7.0 16 16.0 17 25.0 18 42.0 19 81.0 20 136.0 21 226.0 22 370.0 23 493.0 24 719.0 25 1033.0 26 1257.0 27 1673.0 28 2083.0 29 2750.0 30 3452.0 31 4469.0 32 6098.0 33 8150.0 34 12372.0 35 11596.0 36 12046.0 37 15341.0 38 18312.0 39 8784.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.004079071226858 4.662692187009727 57.21457707651621 17.11865166524721 2 19.367071585458785 3.778744004661796 57.217266574028415 19.636917835851 3 21.126899457618002 3.3116679367071584 53.78995024429602 21.771482361378816 4 19.84400914429154 4.521045318033081 48.90313326460173 26.731812273073647 5 16.980590792953517 6.0029584472634365 51.680487695548884 25.335963064234168 6 21.229996862252904 6.142812317898605 54.44349813976422 18.18369268008427 7 86.56147743063337 2.075395580259088 7.427495629566542 3.935631359540993 8 88.95961271235824 1.9445067013313013 5.39602850867363 3.6998520776368284 9 83.8253619615402 4.938813931597114 6.773051234927607 4.462772871935093 10 47.716168362544266 25.145905240037653 12.905105562777356 14.232820834640728 11 36.5583396835358 24.161549150567037 20.515487023174504 18.76462414272267 12 32.76435519297144 21.10090098166659 26.70222780043928 19.432516024922677 13 23.437177820610515 29.283248912994758 28.51136312698911 18.76821013940562 14 18.440091442915417 31.01169931417813 30.354565422026987 20.193643820879466 15 16.68295306826841 24.901160966426104 39.66650230848536 18.749383656820118 16 19.89242009951141 21.85396028508674 36.85508090905016 21.398538706351697 17 21.182482406203775 20.799677260298534 28.388542740597966 29.62929759289973 18 22.880451835582054 22.12649603299117 30.995562329104846 23.997489802321933 19 25.80034963467659 23.179882558608632 27.535972029225874 23.483795777488904 20 29.12098256309113 24.213546102469856 26.08274687345914 20.582724460979872 21 25.776144157066653 25.143215742525438 27.395221659419967 21.68541844098794 22 24.323815500470662 23.593168676318975 27.906226186740778 24.176789636469586 23 24.295127527007036 25.230176162087048 25.357479044331882 25.117217266574027 24 23.941010354565424 24.234165583396834 28.862790801918507 22.962033260119235 25 20.812228248688868 24.78551257340087 28.83410282845488 25.56815634945538 26 21.22013537137478 29.51544219821597 27.811197274642517 21.45322515576673 27 21.948989197184993 28.465641669281457 27.19619884351607 22.389170290017482 28 19.279214666726432 27.76995831278856 31.705589672329555 21.245237348155452 29 20.069926935317582 24.94598592496302 32.55278138867722 22.43130575104218 30 22.139943520552244 26.320319153704787 28.91120175713838 22.628535568604597 31 26.319422654534048 26.284459186875253 24.58380025998476 22.812317898605944 32 26.391142588193105 27.007934017661032 25.303689094087588 21.297234300058275 33 25.983235465507192 26.889596127123582 25.338652561746382 21.788515845622843 34 22.707427495629567 26.889596127123582 26.780223228293515 23.622753148953336 35 21.601147518938546 26.26563270428975 28.657492491819447 23.47572728495226 36 26.754224752342104 23.968801828858307 27.384463669371108 21.89250974942848 37 24.22699359003093 27.492043569859696 27.743063337666413 20.53789950244296 38 22.35779281904164 28.672732977721992 25.09928728315926 23.8701869200771 39 24.65641669281456 26.372316105607602 27.1899233493209 21.78134385225694 40 24.3973284324712 25.258864135550674 27.16661437088171 23.177193061096418 41 20.191850822537987 25.16921421847685 28.07476803083957 26.564166928145593 42 23.89977139271146 24.284369536958177 26.807118203415666 25.008740866914696 43 24.11313819534717 24.234165583396834 27.266125778833654 24.38657044242234 44 21.811824824062036 26.972074050831502 27.159442377515802 24.05665874759066 45 21.76341386884217 27.05903447039312 25.67573624994397 25.501815410820743 46 23.135954099242458 25.93482451028733 28.44681518669595 22.48240620377426 47 21.11793446591062 25.810211125554712 29.170290017481733 23.901564391052936 48 22.734322470751714 23.85404993500381 29.64991707382671 23.76171052041777 49 23.39952485543951 22.76390694338608 30.246089022367656 23.59047917880676 50 22.09153256533238 24.54345779730154 29.10574207718858 24.25926756017751 51 21.439777668205657 25.981442467165717 26.438657044242238 26.14012282038639 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 25.0 1 54.0 2 83.0 3 138.5 4 194.0 5 152.0 6 110.0 7 119.5 8 129.0 9 170.5 10 212.0 11 227.0 12 242.0 13 250.5 14 259.0 15 238.5 16 218.0 17 187.5 18 157.0 19 217.5 20 278.0 21 338.5 22 399.0 23 448.0 24 497.0 25 535.5 26 737.5 27 901.0 28 1004.5 29 1108.0 30 1313.0 31 1518.0 32 1766.5 33 2015.0 34 2370.0 35 2725.0 36 2914.5 37 3104.0 38 3467.5 39 3831.0 40 4642.5 41 5454.0 42 6690.0 43 7926.0 44 8342.5 45 8759.0 46 9180.0 47 9601.0 48 9927.0 49 10253.0 50 10206.0 51 10159.0 52 8981.0 53 7803.0 54 7150.5 55 6498.0 56 6280.5 57 6063.0 58 5499.5 59 4936.0 60 4847.0 61 4758.0 62 4227.5 63 3697.0 64 3106.5 65 2516.0 66 2162.0 67 1808.0 68 1524.0 69 1240.0 70 1009.5 71 779.0 72 565.5 73 352.0 74 269.5 75 148.0 76 109.0 77 66.5 78 24.0 79 31.0 80 38.0 81 21.5 82 5.0 83 3.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 111545.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.04684208167107 #Duplication Level Percentage of deduplicated Percentage of total 1 75.25899777453763 26.375902102290556 2 8.119100606246644 5.69097673584652 3 2.7345048985751923 2.8750728405576225 4 1.4171335021615123 1.9866421623559998 5 1.0283170900161154 1.8019633331839167 6 1.0283170900161154 2.1623559998207 7 0.8032128514056224 1.970505177282711 8 0.7136827565037219 2.000986149087812 9 0.7162407592152048 2.259177910260433 >10 8.083288568285882 49.44282576538617 >50 0.07674008134448622 1.8019633331839167 >100 0.020464021691862993 1.631628490743646 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC 481 0.43121610112510644 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGCT 302 0.27074274956295663 TruSeq Adapter, Index 15 (95% over 22bp) TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 290 0.25998475951409744 No Hit TCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC 210 0.1882648258550361 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTCAGTGTGTCGTATGCCGTCTTCTGC 164 0.1470258640010758 TruSeq Adapter, Index 14 (95% over 21bp) TTTGTAGGGAAGAAAGAAGAAAAGAAAAGGCATAAGTCCTCGTCCTCCTCC 134 0.1201308888789278 No Hit TTTCTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 130 0.11654489219597472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.30122372136805775 0.0 2 0.0 0.0 0.0 1.1708279169841769 0.0 3 0.0 0.0 0.0 1.4756376350351876 0.0 4 0.0 0.0 0.0 1.94002420547761 0.0 5 0.0 0.0 0.0 2.6410865569949347 0.0 6 0.0 0.0 0.0 3.048097180510108 0.0 7 0.0 0.0 0.0 3.406696848805415 0.0 8 0.0 0.0 0.0 4.040521762517369 0.0 9 0.0 0.0 0.0 4.289748531982608 0.0 10 0.0 0.0 0.0 4.782823075888655 0.0 11 0.0 0.0 0.0 5.86131157828679 0.0 12 0.0 0.0 0.0 6.837599175220763 0.0 13 0.0 0.0 0.0 7.187233851808687 0.0 14 0.0 0.0 0.0 7.28943475727285 0.0 15 0.0 0.0 0.0 7.473217087274194 0.0 16 0.0 0.0 0.0 7.964498632838764 0.0 17 0.0 0.0 0.0 8.700524452014882 0.0 18 0.0 0.0 0.0 9.681294544802546 0.0 19 0.0 0.0 0.0 10.209332556367386 0.0 20 0.0 0.0 0.0 10.809090501591285 0.0 21 0.0 0.0 0.0 11.527186337352639 0.0 22 0.0 0.0 0.0 12.234524183065131 0.0 23 0.0 0.0 0.0 12.856694607557488 0.0 24 0.0 0.0 0.0 13.383836119951589 0.0 25 0.0 0.0 0.0 13.837464700345151 0.0 26 0.0 0.0 0.0 14.274956295665426 0.0 27 0.0 0.0 0.0 14.675691424985432 0.0 28 0.0 0.0 0.0 15.108700524452015 0.0 29 0.0 0.0 0.0 15.565018602357792 0.0 30 0.0 0.0 0.0 16.092160114751895 0.0 31 0.0 0.0 0.0 16.581648661974988 0.0 32 0.0 0.0 0.0 17.055896723295533 0.0 33 0.0 0.0 0.0 17.509525303689095 0.0 34 0.0 0.0 0.0 17.980187368326686 0.0 35 0.0 0.0 0.0 18.479537406427898 0.0 36 0.0 0.0 0.0 18.983369940382804 0.0 37 0.0 0.0 0.0 19.48182347931328 0.0 38 0.0 0.0 0.0 19.95338204312161 0.0 39 0.0 0.0 0.0 20.451835582052087 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATAAG 25 3.8681086E-5 45.000004 30 CGGGTAT 25 3.8681086E-5 45.000004 6 CGACGAC 25 3.8681086E-5 45.000004 35 TCGGGAT 30 2.1478481E-6 45.000004 5 TGCGGGC 30 2.1478481E-6 45.000004 4 CGGGGTT 25 3.8681086E-5 45.000004 6 CGGGCTC 30 2.1478481E-6 45.000004 6 GTATCTA 30 2.1478481E-6 45.000004 24 GATGCCA 25 3.8681086E-5 45.000004 9 ATTGGGA 30 2.1478481E-6 45.000004 4 GAATTAA 25 3.8681086E-5 45.000004 44 ACGACAT 25 3.8681086E-5 45.000004 37 GTAGTCA 25 3.8681086E-5 45.000004 10 GGTAGTC 25 3.8681086E-5 45.000004 9 CTGTAAC 20 7.005885E-4 45.0 14 TTTCGCG 45 3.783498E-10 45.0 1 TGGGTCC 35 1.1987868E-7 45.0 6 TGTGGGC 45 3.783498E-10 45.0 4 TGGGTAC 20 7.005885E-4 45.0 6 GTAGGAT 20 7.005885E-4 45.0 13 >>END_MODULE