##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934010.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 314462 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.83498483123557 31.0 30.0 31.0 25.0 34.0 2 29.547439754246938 31.0 30.0 33.0 25.0 34.0 3 29.66604549993322 31.0 30.0 33.0 25.0 34.0 4 33.771342801355964 35.0 33.0 37.0 28.0 37.0 5 34.3954690868849 35.0 35.0 37.0 32.0 37.0 6 33.54516284956529 35.0 33.0 37.0 28.0 37.0 7 34.298970940844995 35.0 35.0 37.0 32.0 37.0 8 33.83523605395882 35.0 35.0 37.0 28.0 37.0 9 35.65998117419593 37.0 35.0 39.0 30.0 39.0 10 35.29121483676883 37.0 34.0 39.0 30.0 39.0 11 35.43848541318188 37.0 35.0 39.0 30.0 39.0 12 35.38205570148381 37.0 35.0 39.0 30.0 39.0 13 35.204752879521216 37.0 34.0 39.0 29.0 39.0 14 35.959470460659794 38.0 34.0 40.0 29.0 41.0 15 36.22247521163129 38.0 34.0 40.0 30.0 41.0 16 36.52907823520807 38.0 35.0 40.0 31.0 41.0 17 36.171047694157004 38.0 34.0 40.0 30.0 41.0 18 36.35364845354923 38.0 35.0 40.0 30.0 41.0 19 36.277966813160255 38.0 35.0 40.0 30.0 41.0 20 36.07075576699251 38.0 34.0 40.0 29.0 41.0 21 35.999185911175275 38.0 34.0 40.0 30.0 41.0 22 36.161889194878874 38.0 34.0 40.0 30.0 41.0 23 36.04010341472102 38.0 34.0 40.0 30.0 41.0 24 36.013372044952966 38.0 34.0 40.0 30.0 41.0 25 35.73869338743632 38.0 34.0 40.0 29.0 41.0 26 35.773966329795016 38.0 34.0 40.0 29.0 41.0 27 35.585552467388744 38.0 34.0 40.0 28.0 41.0 28 35.42725671146275 38.0 34.0 40.0 27.0 41.0 29 35.66961985867927 38.0 34.0 40.0 29.0 41.0 30 35.246176008547934 37.0 34.0 40.0 27.0 41.0 31 35.437346960841055 38.0 34.0 40.0 28.0 41.0 32 35.269819564844084 38.0 34.0 40.0 27.0 41.0 33 35.24904439964129 38.0 34.0 40.0 27.0 41.0 34 35.14847580947777 38.0 34.0 40.0 26.0 41.0 35 35.24575942403216 38.0 34.0 40.0 27.0 41.0 36 34.93816104966578 38.0 33.0 40.0 25.0 41.0 37 34.963852548161626 38.0 34.0 40.0 26.0 41.0 38 34.8312005902144 37.0 33.0 40.0 25.0 41.0 39 34.7035349263186 37.0 33.0 40.0 25.0 41.0 40 34.70177318722135 37.0 33.0 40.0 25.0 41.0 41 34.63036551316216 37.0 33.0 40.0 25.0 41.0 42 34.80842200329452 37.0 33.0 40.0 26.0 41.0 43 34.63874172396029 37.0 33.0 40.0 25.0 41.0 44 34.7774580076448 37.0 33.0 40.0 26.0 41.0 45 34.73043483791364 37.0 34.0 40.0 26.0 41.0 46 34.61028677550865 37.0 34.0 40.0 25.0 41.0 47 34.44674078267008 37.0 33.0 40.0 25.0 41.0 48 34.54142948909566 37.0 33.0 40.0 26.0 41.0 49 34.62742716131043 37.0 33.0 40.0 26.0 41.0 50 34.316000025440275 36.0 33.0 40.0 25.0 41.0 51 33.343415102619716 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 1.0 12 9.0 13 6.0 14 6.0 15 18.0 16 24.0 17 76.0 18 131.0 19 340.0 20 905.0 21 1596.0 22 2417.0 23 3077.0 24 3671.0 25 4107.0 26 4347.0 27 4849.0 28 6009.0 29 7623.0 30 9865.0 31 12731.0 32 16205.0 33 21180.0 34 29600.0 35 29962.0 36 34820.0 37 43369.0 38 51451.0 39 26063.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.554407209774155 4.000165361792521 49.40469754692141 16.040729881511915 2 18.966679598806852 13.283639994657543 49.21802952344003 18.531650883095573 3 20.62252354815526 13.010157030102206 47.48204870540796 18.885270716334563 4 18.86523649916365 4.832062379556194 51.44596167422455 24.856739447055606 5 24.94800643638977 5.6871736489623546 45.08430271384142 24.280517200806457 6 20.6133014481877 14.190903829397511 47.938701655525946 17.257093066888846 7 77.72226850939064 2.2495563851912155 15.881410154486076 4.146764950932067 8 78.33474314861573 10.574250624876774 6.328586601878765 4.762419624628731 9 73.45021020027858 5.165329992177115 7.431422556620514 13.9530372509238 10 44.2959721683383 27.03442705318926 14.704479396556657 13.965121381915779 11 36.750386374188295 22.882892050549827 22.301899752593318 18.06482182266856 12 29.82522530544231 20.299750049290534 25.57669925141989 24.29832539384727 13 27.54704861000693 23.502044762165223 29.356806227779508 19.594100400048337 14 19.89652167829499 31.01742022883528 26.669995102746913 22.41606299012281 15 16.942269654203052 23.325552848992885 36.04887076975915 23.68330672704492 16 18.681748510153852 21.702781258148836 32.56864104406892 27.046829187628397 17 19.6487969929594 25.887070615845474 29.499589775553165 24.964542615641953 18 20.37893290763272 22.417971010805758 29.6843497783516 27.51874630320993 19 22.755054664792564 25.619947720233288 25.701356602705573 25.923641012268572 20 29.86529373978414 23.54115918616558 29.08364126667133 17.509905807378953 21 25.112414218570127 29.93907053952465 25.13403845297683 19.814476788928392 22 22.563616589603832 22.30571579395921 30.53437299260324 24.59629462383372 23 25.469214086280694 26.910405708797885 25.74015302325877 21.880227181662647 24 22.80879724736216 25.76813732660862 28.370359534697354 23.05270589133186 25 20.677856147960643 31.010742156444977 25.33819666605186 22.97320502954252 26 20.169050632508856 26.652822916600417 29.726008229929214 23.452118220961516 27 24.53396594819088 27.796363312578308 25.341058697076274 22.328612042154536 28 18.075951943319065 30.505434678911918 30.430067861935623 20.988545515833394 29 21.76510993379168 22.79226106810998 32.0712836527148 23.371345345383542 30 21.69801120644148 30.49684858583867 27.159084404474942 20.646055803244906 31 23.48773460704314 25.854316260788266 23.752313475078072 26.90563565709052 32 28.478798710178015 26.95556219829423 23.31251470765943 21.25312438386832 33 27.344480414167688 24.549548117101587 24.05187272230031 24.054098746430412 34 22.14099000833169 24.976626746633933 27.55436268929155 25.328020555742825 35 27.09198567712474 22.674281789214596 25.723934847453744 24.50979768620692 36 22.76332275441866 28.874076994994624 25.631077840883794 22.73152240970292 37 23.0046873708111 25.788171543779537 26.939026019042046 24.26811506636732 38 22.842823616208 26.505269317119396 23.369437324700602 27.282469741972005 39 21.7679719648161 26.35421767971965 27.419211224249672 24.45859913121458 40 24.96835865700784 22.184238477145094 27.796363312578308 25.051039553268755 41 19.23602851854914 24.568628323931033 28.364953476095682 27.830389681424144 42 24.51679376204438 23.031081656925164 27.273565645451598 25.17855893557886 43 22.38012860059403 25.297492224815716 25.57351921694831 26.74885995764194 44 23.053659901673335 24.083037060121733 28.888387150116706 23.974915888088226 45 22.206498718446106 24.744484230209054 26.165005628661014 26.884011422683823 46 23.90940717797381 27.345434424509165 25.335016631580288 23.410141765936743 47 19.64307293091057 27.169260514783982 30.471726313513237 22.71594024079221 48 21.55300163453772 25.001749018959362 28.81206632279894 24.633183023703978 49 22.25483524241403 22.92614051936323 30.2542119556576 24.564812282565143 50 22.452951389993068 24.111339366918738 27.565174806494902 25.870534436593296 51 19.7219377858056 23.818140188639646 27.656441795829068 28.803480229725693 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 70.0 1 172.5 2 275.0 3 440.5 4 606.0 5 478.5 6 351.0 7 373.0 8 395.0 9 422.0 10 449.0 11 488.0 12 527.0 13 517.5 14 508.0 15 559.0 16 610.0 17 574.0 18 538.0 19 637.0 20 736.0 21 894.0 22 1052.0 23 1184.0 24 1316.0 25 1514.0 26 2215.5 27 2719.0 28 3314.5 29 3910.0 30 4611.5 31 5313.0 32 6107.0 33 6901.0 34 7764.5 35 8628.0 36 9110.0 37 9592.0 38 10815.0 39 12038.0 40 12700.0 41 13362.0 42 15212.5 43 17063.0 44 17603.0 45 18143.0 46 18989.0 47 19835.0 48 27728.0 49 35621.0 50 32016.5 51 28412.0 52 26986.0 53 25560.0 54 22614.5 55 19669.0 56 18713.5 57 17758.0 58 16961.0 59 16164.0 60 14937.5 61 13711.0 62 11744.5 63 9778.0 64 8742.0 65 7706.0 66 6103.0 67 4500.0 68 3790.0 69 3080.0 70 2765.5 71 2451.0 72 1928.0 73 1405.0 74 1177.0 75 700.5 76 452.0 77 383.0 78 314.0 79 235.0 80 156.0 81 110.0 82 64.0 83 52.5 84 41.0 85 29.5 86 18.0 87 10.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 314462.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.857888331587937 #Duplication Level Percentage of deduplicated Percentage of total 1 74.6979999987927 23.797205425544934 2 8.321999999865495 5.302426933823796 3 3.0119999999513185 2.878678789595759 4 1.613000001583861 2.055470957172392 5 1.1219999999881514 1.7872275353832094 6 0.884999999985724 1.6916538703800312 7 0.819999999986747 1.8286427902035927 8 0.7099999999885246 1.8095280572049481 9 0.6599999999893328 1.892358566865738 >10 8.005999999870603 47.23250523964887 >50 0.1069999999982706 2.2909007498874616 >100 0.03399999999945048 2.231326498708355 >500 0.006999999999886863 1.5164354845590764 >1k 0.00399999999993535 3.685639101021839 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGC 4198 1.3349784711666275 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCG 3385 1.0764416686276879 No Hit GAATCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCTTC 2368 0.7530321628686455 TruSeq Adapter, Index 22 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGACGTGCT 1618 0.5145295775006201 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGACGTGCTCGTA 910 0.2893831369132041 No Hit GCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCTTCTGC 806 0.256310778408838 TruSeq Adapter, Index 22 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCTTCT 674 0.2143343233840655 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTC 664 0.21115428891249183 No Hit CCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCTTCTGC 583 0.18539600969274506 TruSeq Adapter, Index 22 (95% over 24bp) GAATGACTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCT 564 0.1793539441967551 No Hit CTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCTTCTGCT 559 0.17776392696096827 Illumina Single End Adapter 2 (95% over 23bp) GAATGATACGGCGACCACCGATGAATGATACGGCGACCCCCGCTCGAATGC 440 0.13992151674924155 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 393 0.12497535473284531 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 373 0.11861528578969796 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 370 0.11766127544822587 No Hit TCTGTCTCTTATACACATCTGACGCTGACGTGCTCGTATGCCGTCTTCTGC 351 0.11161920995223588 TruSeq Adapter, Index 22 (95% over 24bp) TTTTCCGGGACATCTTCTATGAAAAAACTTTCTACCCCTAACACTAGCATT 339 0.10780316858634749 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGACGTGCTCGT 338 0.10748516513919011 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20606623375797395 0.0 2 0.0 0.0 0.0 0.880869548625907 0.0 3 0.0 0.0 0.0 1.108560016790582 0.0 4 0.0 0.0 0.0 1.678422194096584 0.0 5 0.0 0.0 0.0 3.1018056235729596 0.0 6 0.0 0.0 0.0 3.410586970762763 0.0 7 0.0 0.0 0.0 3.915576444848662 0.0 8 0.0 0.0 0.0 4.598011842448372 0.0 9 0.0 0.0 0.0 4.801852052076245 0.0 10 0.0 0.0 0.0 6.470098135863792 0.0 11 0.0 0.0 0.0 7.280370919220764 0.0 12 0.0 0.0 0.0 9.706101214137162 0.0 13 0.0 0.0 0.0 10.068307140449402 0.0 14 0.0 0.0 0.0 10.245435060516057 0.0 15 0.0 0.0 0.0 10.76791472419561 0.0 16 0.0 0.0 0.0 11.227111701890848 0.0 17 0.0 0.0 0.0 11.761675496562383 0.0 18 0.0 0.0 0.0 12.279385108534576 0.0 19 0.0 0.0 0.0 13.319574384186325 0.0 20 0.0 0.0 0.0 13.774955320515675 0.0 21 0.0 0.0 0.0 14.348951542634723 0.0 22 0.0 0.0 0.0 14.942663978477526 0.0 23 0.0 0.0 0.0 15.516342197149417 0.0 24 0.0 0.0 0.0 15.973313150714553 0.0 25 0.0 0.0 0.0 16.36954544587263 0.0 26 0.0 0.0 0.0 16.734931406656447 0.0 27 0.0 0.0 0.0 17.10158938122889 0.0 28 0.0 0.0 0.0 17.479695479899004 0.0 29 0.0 0.0 0.0 17.853667533756067 0.0 30 0.0 0.0 0.0 18.30141638735364 0.0 31 0.0 0.0 0.0 18.76156737539035 0.0 32 0.0 0.0 0.0 19.189282011817006 0.0 33 0.0 0.0 0.0 19.586150313869403 0.0 34 0.0 0.0 0.0 20.00050880551545 0.0 35 0.0 0.0 0.0 20.465111841812366 0.0 36 0.0 0.0 0.0 20.922718802271817 0.0 37 0.0 0.0 0.0 21.380007759284112 0.0 38 0.0 0.0 0.0 21.822668557727166 0.0 39 0.0 0.0 0.0 22.262467325145806 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCAC 30 2.1604537E-6 45.000004 30 ACGGCTC 60 0.0 45.000004 21 CACCGCG 65 0.0 45.000004 38 TTGATAG 20 7.025463E-4 45.0 31 GTCTGCG 20 7.025463E-4 45.0 1 CCGATCG 35 1.2081728E-7 45.0 40 ACACCGA 20 7.025463E-4 45.0 37 CAGCATA 20 7.025463E-4 45.0 20 CCGTGCA 20 7.025463E-4 45.0 41 GTTAGGG 70 0.0 45.0 3 TACGGAG 45 3.8198777E-10 45.0 29 CGTTCGG 25 3.8843227E-5 45.0 2 TTATCGG 20 7.025463E-4 45.0 2 AGAACCC 20 7.025463E-4 45.0 10 ACGATTA 20 7.025463E-4 45.0 12 TTAAGGG 25 3.8843227E-5 45.0 3 TACGAAT 45 3.8198777E-10 45.0 12 TTGACGG 20 7.025463E-4 45.0 2 CGTACAA 20 7.025463E-4 45.0 10 ATACGGA 45 3.8198777E-10 45.0 28 >>END_MODULE