##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934005.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 288311 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.9028791825494 31.0 30.0 31.0 25.0 34.0 2 29.981193919066563 31.0 30.0 33.0 25.0 34.0 3 30.04843727780071 31.0 30.0 33.0 25.0 34.0 4 33.91511250004336 35.0 33.0 37.0 28.0 37.0 5 34.40270055599682 35.0 35.0 37.0 32.0 37.0 6 33.726215787812464 35.0 33.0 37.0 28.0 37.0 7 34.37400931632855 35.0 35.0 37.0 32.0 37.0 8 34.15822150386215 35.0 35.0 37.0 30.0 37.0 9 35.76300938916656 37.0 35.0 39.0 30.0 39.0 10 35.2159716417341 37.0 34.0 39.0 30.0 39.0 11 35.34395496529789 37.0 34.0 39.0 30.0 39.0 12 35.333507913329704 37.0 35.0 39.0 30.0 39.0 13 35.23168384140737 37.0 34.0 39.0 30.0 39.0 14 35.91498763488039 38.0 34.0 40.0 28.0 41.0 15 36.16337219183451 38.0 34.0 40.0 30.0 41.0 16 36.42493696043508 38.0 35.0 40.0 31.0 41.0 17 36.12022087259938 38.0 34.0 40.0 30.0 41.0 18 36.26785311694663 38.0 35.0 40.0 30.0 41.0 19 36.248103610337445 38.0 34.0 40.0 30.0 41.0 20 36.195407043088885 38.0 34.0 40.0 30.0 41.0 21 35.9674830304775 38.0 34.0 40.0 29.0 41.0 22 36.17372906340722 38.0 34.0 40.0 30.0 41.0 23 36.15220022822577 38.0 34.0 40.0 30.0 41.0 24 36.080107938996434 38.0 34.0 40.0 30.0 41.0 25 35.701218475881944 38.0 34.0 40.0 29.0 41.0 26 35.80233151007072 38.0 34.0 40.0 29.0 41.0 27 35.73776928386361 38.0 34.0 40.0 29.0 41.0 28 35.64138378348381 38.0 34.0 40.0 29.0 41.0 29 35.76055370762822 38.0 34.0 40.0 29.0 41.0 30 35.36464442910607 38.0 34.0 40.0 27.0 41.0 31 35.5127345123842 38.0 34.0 40.0 28.0 41.0 32 35.454682617035076 38.0 34.0 40.0 28.0 41.0 33 35.45318423507948 38.0 34.0 40.0 27.0 41.0 34 35.44241808325038 38.0 34.0 40.0 28.0 41.0 35 35.40700493564241 38.0 34.0 40.0 27.0 41.0 36 35.15556118219561 38.0 34.0 40.0 27.0 41.0 37 35.22651927952801 38.0 34.0 40.0 27.0 41.0 38 35.164846294452865 38.0 34.0 40.0 27.0 41.0 39 35.09517153351762 37.0 34.0 40.0 27.0 41.0 40 35.010266691177236 37.0 33.0 40.0 26.0 41.0 41 34.85096302256938 37.0 33.0 40.0 26.0 41.0 42 35.05141323085141 37.0 33.0 40.0 27.0 41.0 43 35.00864344405867 37.0 33.0 40.0 27.0 41.0 44 34.99658355040217 37.0 34.0 40.0 27.0 41.0 45 35.14177398711808 37.0 34.0 40.0 27.0 41.0 46 35.01101241367829 37.0 34.0 40.0 27.0 41.0 47 34.8913499658355 37.0 33.0 40.0 26.0 41.0 48 34.92593067902369 37.0 33.0 40.0 27.0 41.0 49 34.91397483966966 37.0 34.0 40.0 27.0 41.0 50 34.68688672995481 37.0 33.0 40.0 26.0 41.0 51 33.64226477657807 36.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 0.0 12 3.0 13 2.0 14 9.0 15 18.0 16 34.0 17 65.0 18 116.0 19 305.0 20 644.0 21 1030.0 22 1469.0 23 1894.0 24 2370.0 25 2953.0 26 3667.0 27 4556.0 28 5759.0 29 7312.0 30 9418.0 31 12048.0 32 15233.0 33 19628.0 34 26660.0 35 27586.0 36 33103.0 37 41454.0 38 48281.0 39 22689.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.551883209450907 4.598853321586758 52.17109302107793 16.6781704478844 2 17.860227323966132 8.412790354859856 53.6226505405621 20.104331780611908 3 20.365854927491494 8.350357773376667 50.892959339047074 20.39082796008477 4 19.3221902736975 4.779560960213104 49.90617770393776 25.992071062151634 5 21.43588000457839 5.482274349573898 48.70296311968673 24.378882526160986 6 20.685995331430295 10.263222700486626 51.03655427645841 18.01422769162467 7 79.922028642681 2.666218077007121 13.003666179923762 4.408087100388122 8 80.9663869918248 6.913021008563669 6.928976001609373 5.191615998002157 9 75.97386155921903 5.039003021043249 8.9240438276722 10.063091592065513 10 42.712556926374646 24.966789335127693 17.161329259029312 15.159324479468353 11 33.11250698030946 25.08055537249706 23.566218423854796 18.240719223338687 12 27.680872391271926 21.683876092136618 28.9021230546181 21.733128461973354 13 25.604642209280946 24.592193846228554 30.342234600830352 19.460929343660144 14 20.094273198039616 28.669735112430672 28.767199309079434 22.468792380450278 15 17.263649323126764 25.201605211039467 35.90879293540656 21.625952530427213 16 20.682526854681228 24.376107744761732 30.82851504104942 24.112850359507615 17 20.356490040269016 25.707655968728215 30.124067413314094 23.811786577688675 18 20.811901037421396 24.56895505200981 30.75775811536847 23.86138579520032 19 22.234670199888313 26.586567976941566 28.38670740970688 22.79205441346324 20 26.16445435658022 26.369788180124935 29.86046318038507 17.605294282909774 21 24.873140462902906 28.85946079060459 27.18071804405659 19.086680702435913 22 22.64360360860321 24.52802702637083 29.8254315652195 23.002937799806457 23 22.475035638598598 27.235173129016932 28.394684906229735 21.895106326154743 24 22.206228690545974 25.34762808217515 28.95206911980466 23.49407410747422 25 19.710659669592907 28.9333393453597 27.07146102646101 24.284539958586386 26 19.65065502183406 27.426979893240283 28.3561848143151 24.566180270610555 27 21.622137206003238 29.388056647162266 27.31147961749638 21.67832652933811 28 18.68884641931803 28.02217050338003 30.395649142765972 22.89333393453597 29 19.68984880909851 26.05727842503408 28.74604160091013 25.506831164957283 30 21.6252588350774 29.17543902244451 28.192472711759176 21.006829430718913 31 23.568299509904236 26.72842867597837 25.411448054357965 24.291823759759428 32 24.139210782800518 29.06756939554856 24.73336084991554 22.059858971735384 33 24.956037057205588 26.221337375264902 25.45619140442092 23.366434163108586 34 22.043210283339864 26.207116620593734 27.315988637270173 24.433684458796233 35 21.44524489180087 27.407556423445516 25.465209443968494 25.681989240785125 36 23.214514881499493 28.233053889723248 25.481164437014197 23.071266791763062 37 20.97838792137657 29.553156140417812 27.28720028025292 22.181255657952697 38 23.388285566627705 27.763422137899695 24.470450312336332 24.377841983136268 39 22.665801859797234 25.841539171242168 27.886899910166452 23.60575905879415 40 22.680716309818216 25.27999278556836 28.497698665676996 23.541592238936428 41 20.602405041777804 25.787777781631643 28.27502245838695 25.334794718203607 42 21.84307917491875 25.992764757501448 27.061402443888717 25.102753623691083 43 23.568299509904236 25.325776678656037 27.01735278917558 24.08857102226415 44 21.36755101262179 25.22657824363274 28.338842430569766 25.067028313175705 45 21.748389759669244 25.213398031986294 25.993458452851257 27.0447537554932 46 23.030685613798987 27.060361900864 26.65593751192289 23.25301497341413 47 19.92813316175935 26.716289007356643 30.37830675902064 22.97727107186337 48 21.341190589328885 25.27201528904551 28.86882567782707 24.517968443798537 49 21.811169188827343 23.995962693064087 30.785505929361 23.40736218874757 50 22.52983757123384 24.172161311916646 28.299648643305318 24.998352473544195 51 20.361345907717705 24.405589797128798 26.974343677487155 28.258720617666338 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 73.0 1 181.5 2 290.0 3 449.0 4 608.0 5 477.0 6 346.0 7 389.0 8 432.0 9 499.5 10 567.0 11 608.5 12 650.0 13 630.5 14 611.0 15 654.5 16 698.0 17 649.5 18 601.0 19 691.5 20 782.0 21 987.5 22 1193.0 23 1191.0 24 1189.0 25 1736.0 26 2928.5 27 3574.0 28 3829.0 29 4084.0 30 4769.5 31 5455.0 32 6527.0 33 7599.0 34 7971.5 35 8344.0 36 8968.0 37 9592.0 38 10353.5 39 11115.0 40 12355.5 41 13596.0 42 14955.0 43 16314.0 44 17393.5 45 18473.0 46 19123.5 47 19774.0 48 24702.0 49 29630.0 50 29198.5 51 28767.0 52 26939.0 53 25111.0 54 21846.0 55 18581.0 56 16364.5 57 14148.0 58 13291.5 59 12435.0 60 11253.0 61 10071.0 62 8831.0 63 7591.0 64 6181.0 65 4771.0 66 4032.5 67 3294.0 68 2760.0 69 2226.0 70 1832.0 71 1438.0 72 1146.5 73 855.0 74 698.5 75 431.0 76 320.0 77 246.5 78 173.0 79 113.5 80 54.0 81 42.5 82 31.0 83 16.0 84 1.0 85 7.0 86 13.0 87 13.5 88 14.0 89 8.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 288311.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.60601403820128 #Duplication Level Percentage of deduplicated Percentage of total 1 72.86816285482999 25.94544829547013 2 9.911288675163329 7.058029674090617 3 3.440467275828952 3.6750397836341335 4 1.8191253511353145 2.5908721115908735 5 1.3463217386975443 2.3968575364000158 6 1.027480702478795 2.195069538986453 7 0.9795048380211988 2.441338410914821 8 0.8695604104298307 2.476926414466289 9 0.7826043689429518 2.5078879932246356 >10 6.845539364829681 41.103099126020844 >50 0.06796564123350167 1.6509283950714757 >100 0.03298332589272875 2.028517320954389 >500 0.003997978896088333 1.1181756881471387 >1k 0.004997473620110417 2.8118097110281806 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGC 2400 0.832434419775867 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCG 2027 0.703060237035701 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTC 1297 0.4498614343538748 No Hit CCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 1118 0.3877757005455914 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGCGTAGT 1059 0.3673116877261013 No Hit GCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 917 0.31805931788936254 No Hit CTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGCT 890 0.308694430666884 No Hit TCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 802 0.27817183527510225 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTA 533 0.18486981072522382 No Hit GAACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT 367 0.12729309669072633 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTC 366 0.12694624901581972 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 341 0.11827505714315445 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCT 319 0.110644408295209 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.33678909233431953 0.0 2 0.0 0.0 0.0 1.4539854532085144 0.0 3 0.0 0.0 0.0 1.8150538827862968 0.0 4 0.0 0.0 0.0 2.5184609674969045 0.0 5 0.0 0.0 0.0 3.990135652125656 0.0 6 0.0 0.0 0.0 4.516997270308798 0.0 7 0.0 0.0 0.0 5.149647429338457 0.0 8 0.0 0.0 0.0 6.071221701565324 0.0 9 0.0 0.0 0.0 6.396911668302631 0.0 10 0.0 0.0 0.0 7.856099836634745 0.0 11 0.0 0.0 0.0 9.158859703583976 0.0 12 0.0 0.0 0.0 11.32943245314955 0.0 13 0.0 0.0 0.0 11.783456059602305 0.0 14 0.0 0.0 0.0 11.96000152612977 0.0 15 0.0 0.0 0.0 12.420962086080657 0.0 16 0.0 0.0 0.0 13.031067146241385 0.0 17 0.0 0.0 0.0 13.844771791572295 0.0 18 0.0 0.0 0.0 14.737210859107005 0.0 19 0.0 0.0 0.0 15.744456507035805 0.0 20 0.0 0.0 0.0 16.429133817301455 0.0 21 0.0 0.0 0.0 17.283072792921534 0.0 22 0.0 0.0 0.0 18.174124469756617 0.0 23 0.0 0.0 0.0 19.002049869758697 0.0 24 0.0 0.0 0.0 19.622560360166627 0.0 25 0.0 0.0 0.0 20.226769009853943 0.0 26 0.0 0.0 0.0 20.741144111740446 0.0 27 0.0 0.0 0.0 21.269739968298122 0.0 28 0.0 0.0 0.0 21.780993441110468 0.0 29 0.0 0.0 0.0 22.35190471400675 0.0 30 0.0 0.0 0.0 22.99079813118473 0.0 31 0.0 0.0 0.0 23.59743471459639 0.0 32 0.0 0.0 0.0 24.185341523563096 0.0 33 0.0 0.0 0.0 24.74272573713802 0.0 34 0.0 0.0 0.0 25.302537884437292 0.0 35 0.0 0.0 0.0 25.9116024015733 0.0 36 0.0 0.0 0.0 26.52066691870931 0.0 37 0.0 0.0 0.0 27.12973143584532 0.0 38 0.0 0.0 0.0 27.718678787836744 0.0 39 0.0 0.0 0.0 28.344738841043178 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAT 50 2.1827873E-11 45.000004 43 GCCGGGT 25 3.8835118E-5 45.000004 4 CGACCAA 25 3.8835118E-5 45.000004 34 ATCCGGC 25 3.8835118E-5 45.000004 6 TTAGTCA 25 3.8835118E-5 45.000004 32 CGGTCGA 25 3.8835118E-5 45.000004 41 TTGTTCG 35 1.2076998E-7 45.000004 1 GCGTCCC 25 3.8835118E-5 45.000004 7 TTCGATA 25 3.8835118E-5 45.000004 15 TGCGTTA 25 3.8835118E-5 45.000004 22 CCTTACA 20 7.0244865E-4 45.0 7 CGCGGAA 20 7.0244865E-4 45.0 41 CGTGAGT 20 7.0244865E-4 45.0 29 ATGTCGT 20 7.0244865E-4 45.0 38 TCGATAT 20 7.0244865E-4 45.0 16 GTAATAG 20 7.0244865E-4 45.0 13 TAGCACA 20 7.0244865E-4 45.0 44 ATGCGTT 20 7.0244865E-4 45.0 21 GTGAGTC 20 7.0244865E-4 45.0 30 TATACGA 20 7.0244865E-4 45.0 16 >>END_MODULE