SRR2934003.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934003.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	197964
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGC	1638	0.8274231678486997	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCG	1348	0.6809318866056455	No Hit
CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	1274	0.643551352771211	No Hit
GAATCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC	1151	0.5814188438301914	No Hit
CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCT	922	0.46574124588308985	No Hit
TCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	756	0.3818876159301691	No Hit
GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC	659	0.33288880806611304	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACTTTGCGT	583	0.2944979895334505	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTA	359	0.18134610333191895	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTC	323	0.16316097876381566	No Hit
GAACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT	303	0.15305813178153604	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	274	0.1384090036572306	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCC	267	0.13487300721343273	No Hit
CGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG	255	0.128811299024065	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCT	252	0.12729587197672304	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	251	0.12679072962760907	No Hit
TTTTTTGGGTTAAAAACAAATCTTGTTGCTGATTTGTCCATTTCTTTCCCT	219	0.11062617445596169	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGATT	30	2.156372E-6	45.000004	9
TACCGGG	35	1.2051169E-7	45.000004	3
ACTGCGG	20	7.0191285E-4	45.0	2
GTTCTCG	25	3.879075E-5	45.0	1
ATTAGTC	25	3.879075E-5	45.0	31
GATAAAC	20	7.0191285E-4	45.0	9
CAAGTCG	20	7.0191285E-4	45.0	27
TAAAGCA	20	7.0191285E-4	45.0	13
GGGTCTA	20	7.0191285E-4	45.0	8
GGCCGAT	45	3.8198777E-10	45.0	8
GCAAACG	25	3.879075E-5	45.0	10
TACGGGA	25	3.879075E-5	45.0	4
CGTTCGG	20	7.0191285E-4	45.0	2
ACGGGAA	20	7.0191285E-4	45.0	5
AACATAC	20	7.0191285E-4	45.0	16
TTAACTT	20	7.0191285E-4	45.0	22
CTATTTC	20	7.0191285E-4	45.0	39
ACCCGTC	25	3.879075E-5	45.0	39
GCGTCCC	20	7.0191285E-4	45.0	7
CATCAGA	20	7.0191285E-4	45.0	12