##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933999.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 229488 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.050608310674196 31.0 30.0 31.0 26.0 34.0 2 30.441713727950916 31.0 30.0 33.0 27.0 34.0 3 30.491337237676916 31.0 30.0 34.0 27.0 34.0 4 34.066304120476886 35.0 33.0 37.0 30.0 37.0 5 34.43194415394269 35.0 35.0 37.0 32.0 37.0 6 34.0427255455623 35.0 35.0 37.0 30.0 37.0 7 34.538132712821586 35.0 35.0 37.0 32.0 37.0 8 34.724739419926095 35.0 35.0 37.0 32.0 37.0 9 35.97891393014014 37.0 35.0 39.0 31.0 39.0 10 35.26893780938437 37.0 34.0 39.0 30.0 39.0 11 35.35702956145855 37.0 34.0 39.0 30.0 39.0 12 35.44058077110786 37.0 35.0 39.0 30.0 39.0 13 35.49516750331172 37.0 35.0 39.0 30.0 39.0 14 36.15794725650143 38.0 35.0 40.0 30.0 41.0 15 36.47865247856097 38.0 35.0 40.0 30.0 41.0 16 36.59744300355574 38.0 35.0 40.0 31.0 41.0 17 36.35519940040438 38.0 35.0 40.0 30.0 41.0 18 36.462743149968624 38.0 35.0 40.0 31.0 41.0 19 36.48622585930419 38.0 35.0 40.0 30.0 41.0 20 36.56774646168863 38.0 35.0 40.0 31.0 41.0 21 36.2024593878547 38.0 34.0 40.0 30.0 41.0 22 36.39894024959911 38.0 35.0 40.0 30.0 41.0 23 36.50763874363801 38.0 35.0 40.0 30.0 41.0 24 36.39971588928397 38.0 35.0 40.0 30.0 41.0 25 35.90701038834275 38.0 34.0 40.0 29.0 41.0 26 36.05182841804365 38.0 34.0 40.0 30.0 41.0 27 36.10045405424249 38.0 34.0 40.0 30.0 41.0 28 35.98589032977759 38.0 34.0 40.0 30.0 41.0 29 36.10711235445862 38.0 35.0 40.0 30.0 41.0 30 35.69729571916614 38.0 34.0 40.0 29.0 41.0 31 35.84132939412954 38.0 34.0 40.0 29.0 41.0 32 35.880242104162306 38.0 34.0 40.0 30.0 41.0 33 35.924880603778846 38.0 34.0 40.0 30.0 41.0 34 35.95314787701318 38.0 34.0 40.0 30.0 41.0 35 35.97219898208185 38.0 35.0 40.0 30.0 41.0 36 35.766297148434774 38.0 34.0 40.0 29.0 41.0 37 35.78260736944851 38.0 34.0 40.0 29.0 41.0 38 35.67274541588231 38.0 34.0 40.0 29.0 41.0 39 35.611186641567315 38.0 34.0 40.0 28.0 41.0 40 35.57176410095517 38.0 34.0 40.0 28.0 41.0 41 35.47244300355574 38.0 34.0 40.0 28.0 41.0 42 35.67970874294081 38.0 34.0 40.0 29.0 41.0 43 35.649585163494386 38.0 34.0 40.0 28.0 41.0 44 35.53126525134212 38.0 34.0 40.0 28.0 41.0 45 35.61119535661995 38.0 34.0 40.0 28.0 41.0 46 35.51389615143275 38.0 34.0 40.0 28.0 41.0 47 35.46576727323433 38.0 34.0 40.0 28.0 41.0 48 35.44319964442585 37.0 34.0 40.0 28.0 41.0 49 35.45804137906993 37.0 34.0 40.0 28.0 41.0 50 35.235973122777665 37.0 34.0 40.0 28.0 41.0 51 34.0964712751865 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 4.0 13 2.0 14 7.0 15 7.0 16 9.0 17 34.0 18 70.0 19 152.0 20 240.0 21 371.0 22 622.0 23 907.0 24 1347.0 25 1850.0 26 2527.0 27 3188.0 28 4275.0 29 5346.0 30 6987.0 31 9060.0 32 11454.0 33 14852.0 34 20495.0 35 21535.0 36 26502.0 37 34906.0 38 42294.0 39 20443.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.247734086313883 4.521369309070627 55.97155406818657 18.25934253642892 2 18.74128494736108 3.425451439726696 57.38382834832323 20.449435264588995 3 20.62373631736736 3.4189151502475075 55.42032698877502 20.537021543610123 4 20.871243812312628 4.4725650142926865 49.532873178554 25.12331799484069 5 17.680227288572823 5.209422714913198 52.59054939691836 24.51980059959562 6 21.035958307188178 5.83472774175556 54.691748588161474 18.43756536289479 7 83.6244160914732 2.092919891236143 9.667172139719723 4.61549187757094 8 85.39313602454158 2.54566687582793 6.868768737363173 5.192428362267308 9 79.9065746357108 5.6931081363731435 9.317698528899115 5.082618699016942 10 36.82894094680332 36.67163424667085 15.325855818169142 11.17356898835669 11 25.562556647842154 24.856201631457854 31.806891863626856 17.774349857073137 12 24.241354667782193 23.047828208882382 33.83532036533501 18.875496758000416 13 21.701788328801506 26.175224848358088 34.14165446559297 17.98133235724744 14 17.318988356689673 29.516576030119225 32.10015338492644 21.06428222826466 15 15.910635850240535 28.34178693439308 37.35881614724953 18.388761068116853 16 18.924301052778358 25.05664784215297 34.84365195565781 21.17539914941086 17 18.627117757791257 25.971292616607407 31.0373527156104 24.364236909990936 18 19.26113783727254 24.74290594715192 33.84403541797392 22.15192079760162 19 21.22463919682075 26.30812940110158 31.185508610472006 21.281722791605663 20 24.02696437286481 27.02537823328453 31.361116921146206 17.586540472704453 21 22.85696855609008 27.21144460712543 30.61380115735899 19.317785679425505 22 20.63811615422157 25.432702363522274 31.00162099979084 22.927560482465314 23 19.660287248134978 26.856741964721465 30.031199888447325 23.45177089869623 24 20.63201561737433 25.52203165307119 32.12586279021125 21.720089939343236 25 19.02495991075786 28.044167886774034 29.398922819493826 23.531949382974275 26 19.58141602175277 28.944868577006204 29.225493271979364 22.24822212926166 27 19.64024262706547 27.712124381231263 30.753241999581675 21.894390992121593 28 18.849787352715612 27.619309070626784 32.16072300076692 21.37018057589068 29 19.39578540054382 24.473175067977408 32.33066652722583 23.800373004252943 30 20.489088754096073 25.39435613191104 30.332740709753885 23.783814404239003 31 21.339242139022517 28.249407376420553 28.80760649794325 21.60374398661368 32 21.0390085756118 29.663424667084985 28.133497176322948 21.164069580980268 33 20.229815938088265 28.47076971344907 28.545719166143762 22.7536951823189 34 18.999686258105 26.223593390504078 31.39859164749355 23.37812870389737 35 18.546939273513214 26.701614027748725 29.5562295196263 25.19521717911176 36 21.26603569685561 26.995311301680264 28.798019940040437 22.94063306142369 37 20.07120198005996 27.96921843407934 30.934950847103117 21.02462873875758 38 19.327372237328312 29.468207487973224 28.553998466150738 22.650421808547723 39 19.41147249529387 26.313358432684936 30.903140904971067 23.37202816705013 40 20.837690859652792 25.29936205814683 30.824269678588855 23.03867740361152 41 18.100728578400613 27.170048107090565 29.507860977480306 25.221362337028513 42 20.62155755420763 27.27506449138953 27.849822212926167 24.253555741476678 43 22.168043644983616 25.910287248134978 28.414121871296103 23.507547235585303 44 20.152687722233843 25.576064979432477 29.72094401450185 24.550303283831834 45 20.275134211810638 25.11896046852123 28.497350623997768 26.10855469567036 46 20.582775569964443 25.688489158474514 30.75977828906087 22.968956982500174 47 18.107264867879802 26.487659485463293 32.29842083246183 23.10665481419508 48 18.41752074182528 25.657986474238303 30.859565641776477 25.064927142159938 49 19.401450184759117 24.653140904971067 32.47533640103186 23.470072509237955 50 19.20448999511957 24.42785679425504 30.38720978874712 25.98044342187827 51 17.983511120407165 24.978648121034652 28.256815171163634 28.78102558739455 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 56.0 1 122.5 2 189.0 3 341.5 4 494.0 5 382.5 6 271.0 7 309.0 8 347.0 9 415.0 10 483.0 11 490.0 12 497.0 13 568.0 14 639.0 15 670.5 16 702.0 17 744.0 18 786.0 19 940.0 20 1094.0 21 1223.5 22 1353.0 23 1384.5 24 1416.0 25 1854.5 26 3004.0 27 3715.0 28 4092.5 29 4470.0 30 5191.5 31 5913.0 32 6298.0 33 6683.0 34 7658.5 35 8634.0 36 9288.5 37 9943.0 38 10819.0 39 11695.0 40 12413.5 41 13132.0 42 14402.0 43 15672.0 44 16736.0 45 17800.0 46 19574.5 47 21349.0 48 23352.5 49 25356.0 50 23577.5 51 21799.0 52 18136.0 53 14473.0 54 12163.0 55 9853.0 56 8442.0 57 7031.0 58 6796.5 59 6562.0 60 5971.5 61 5381.0 62 4549.0 63 3717.0 64 3001.0 65 2285.0 66 1820.5 67 1356.0 68 1074.0 69 792.0 70 668.5 71 545.0 72 428.5 73 312.0 74 266.0 75 146.0 76 72.0 77 76.0 78 80.0 79 49.5 80 19.0 81 12.0 82 5.0 83 3.0 84 1.0 85 1.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 229488.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.71242069302099 #Duplication Level Percentage of deduplicated Percentage of total 1 74.25959780621572 30.975475841874083 2 9.734134238704623 8.120686048943735 3 3.419169495951946 4.278655093076762 4 1.950378688952729 3.2542006553719585 5 1.4458083050404806 3.015408213065607 6 1.2128493079132934 3.035452834135118 7 1.0822669104204752 3.160078086871645 8 0.9652650822669103 3.22108345534407 9 0.8639331418124837 3.243306839573311 >10 4.964220423086968 31.67485881614725 >50 0.06894750587620789 1.962194101652374 >100 0.029250457038391228 2.059802691208255 >500 0.0010446591799425438 0.3272502265913686 >1k 0.0031339775398276314 1.6715470961444607 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 1653 0.7202991006065677 No Hit CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT 1158 0.5046015477933488 No Hit TCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 1025 0.44664644774454443 No Hit GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 751 0.3272502265913686 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCC 285 0.12418950010458063 No Hit TTTTTTTGGGGAACTTAAAACAAAAATATAATTATTCATTATTTCTACACA 272 0.11852471588928398 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 267 0.11634595272955449 No Hit CGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG 249 0.10850240535452835 No Hit TTTATTGGGGGAAAAGATCTTTTTGTTAACAATTTTGTTGATGCTTACATT 244 0.10632364219479887 No Hit TTCCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT 243 0.10588788956285296 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5473053057240466 0.0 2 0.0 0.0 0.0 2.2336679913546678 0.0 3 0.0 0.0 0.0 2.8323921076483303 0.0 4 0.0 0.0 0.0 3.7082548978595833 0.0 5 0.0 0.0 0.0 5.0081049989541935 0.0 6 0.0 0.0 0.0 5.685264588998118 0.0 7 0.0 0.0 0.0 6.358502405354528 0.0 8 0.0 0.0 0.0 7.4313253852053265 0.0 9 0.0 0.0 0.0 7.860541727672035 0.0 10 0.0 0.0 0.0 8.71592414418183 0.0 11 0.0 0.0 0.0 10.363069092937321 0.0 12 0.0 0.0 0.0 11.985376141671896 0.0 13 0.0 0.0 0.0 12.4629610262846 0.0 14 0.0 0.0 0.0 12.637697831694904 0.0 15 0.0 0.0 0.0 12.923115805619465 0.0 16 0.0 0.0 0.0 13.608554695670362 0.0 17 0.0 0.0 0.0 14.785522554556229 0.0 18 0.0 0.0 0.0 16.115439587255107 0.0 19 0.0 0.0 0.0 16.952520393223175 0.0 20 0.0 0.0 0.0 17.79221571498292 0.0 21 0.0 0.0 0.0 18.74564247368054 0.0 22 0.0 0.0 0.0 19.840253085128634 0.0 23 0.0 0.0 0.0 20.85599247019452 0.0 24 0.0 0.0 0.0 21.62073833925957 0.0 25 0.0 0.0 0.0 22.297897929303492 0.0 26 0.0 0.0 0.0 22.91535940877083 0.0 27 0.0 0.0 0.0 23.562452067210486 0.0 28 0.0 0.0 0.0 24.24701945199749 0.0 29 0.0 0.0 0.0 24.943352157847034 0.0 30 0.0 0.0 0.0 25.808756884891586 0.0 31 0.0 0.0 0.0 26.568273722373284 0.0 32 0.0 0.0 0.0 27.287265565084013 0.0 33 0.0 0.0 0.0 27.93130795510005 0.0 34 0.0 0.0 0.0 28.603238513560623 0.0 35 0.0 0.0 0.0 29.347504008924215 0.0 36 0.0 0.0 0.0 30.032507146343164 0.0 37 0.0 0.0 0.0 30.770236352227567 0.0 38 0.0 0.0 0.0 31.483999163354948 0.0 39 0.0 0.0 0.0 32.220856863975456 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 20 7.0214743E-4 45.000004 1 CGGCGCA 20 7.0214743E-4 45.000004 22 GATACAA 25 3.8810173E-5 45.000004 9 TCTTGCG 50 2.1827873E-11 45.000004 1 ACCGGCG 20 7.0214743E-4 45.000004 20 CTCGTTT 20 7.0214743E-4 45.000004 18 CACGGGT 20 7.0214743E-4 45.000004 39 ATGGCAC 20 7.0214743E-4 45.000004 21 CCGGCGC 20 7.0214743E-4 45.000004 21 CGGTTGG 20 7.0214743E-4 45.000004 2 CGCGCAT 25 3.8810173E-5 45.000004 36 GTTAGCG 20 7.0214743E-4 45.000004 1 CCTTTCG 20 7.0214743E-4 45.000004 1 AACGCCA 20 7.0214743E-4 45.000004 36 GGAACGA 20 7.0214743E-4 45.000004 8 CGGTGGA 20 7.0214743E-4 45.000004 16 GAACGGC 20 7.0214743E-4 45.000004 39 CGATGAA 20 7.0214743E-4 45.000004 19 GGACCTA 20 7.0214743E-4 45.000004 8 CACACCG 20 7.0214743E-4 45.000004 17 >>END_MODULE