##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933997.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 548485 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.996758343436923 31.0 30.0 31.0 26.0 34.0 2 30.15350283052408 31.0 30.0 33.0 26.0 34.0 3 30.23209750494544 31.0 30.0 34.0 25.0 34.0 4 34.003141380347685 35.0 33.0 37.0 28.0 37.0 5 34.42895977100559 35.0 35.0 37.0 32.0 37.0 6 33.842569988240335 35.0 35.0 37.0 29.0 37.0 7 34.390871217991375 35.0 35.0 37.0 32.0 37.0 8 34.464856832912474 35.0 35.0 37.0 31.0 37.0 9 35.91112427869495 37.0 35.0 39.0 31.0 39.0 10 35.29032152201063 37.0 34.0 39.0 30.0 39.0 11 35.38818199221492 37.0 35.0 39.0 30.0 39.0 12 35.288556660619705 37.0 34.0 39.0 30.0 39.0 13 35.15636526067258 37.0 34.0 39.0 29.0 39.0 14 35.73392162046364 38.0 34.0 40.0 27.0 41.0 15 36.03238921757204 38.0 34.0 40.0 29.0 41.0 16 36.28184180059619 38.0 35.0 40.0 30.0 41.0 17 36.0525228584191 38.0 34.0 40.0 30.0 41.0 18 36.222551209239995 38.0 35.0 40.0 30.0 41.0 19 36.19833723802839 38.0 34.0 40.0 30.0 41.0 20 36.12723957811061 38.0 34.0 40.0 30.0 41.0 21 35.86778854480979 38.0 34.0 40.0 29.0 41.0 22 36.109355770896194 38.0 34.0 40.0 30.0 41.0 23 36.16362708187097 38.0 34.0 40.0 30.0 41.0 24 36.08363583324977 38.0 34.0 40.0 30.0 41.0 25 35.653193797460276 38.0 34.0 40.0 29.0 41.0 26 35.750104378424204 38.0 34.0 40.0 29.0 41.0 27 35.70062080093348 38.0 34.0 40.0 29.0 41.0 28 35.60054696117487 38.0 34.0 40.0 29.0 41.0 29 35.74894482073348 38.0 34.0 40.0 29.0 41.0 30 35.31637510597373 37.0 34.0 40.0 27.0 41.0 31 35.42381468955395 38.0 34.0 40.0 28.0 41.0 32 35.43481954839239 38.0 34.0 40.0 28.0 41.0 33 35.41606424970601 38.0 34.0 40.0 28.0 41.0 34 35.340231729217756 38.0 34.0 40.0 27.0 41.0 35 35.3311776985697 38.0 34.0 40.0 27.0 41.0 36 35.119197425636074 37.0 34.0 40.0 27.0 41.0 37 35.12333974493377 37.0 34.0 40.0 27.0 41.0 38 35.05561865866888 37.0 33.0 40.0 27.0 41.0 39 34.996431989935914 37.0 33.0 40.0 27.0 41.0 40 34.936614492647934 37.0 33.0 40.0 26.0 41.0 41 34.738581729673555 37.0 33.0 40.0 26.0 41.0 42 34.957896751962224 37.0 33.0 40.0 27.0 41.0 43 34.87464561473878 37.0 33.0 40.0 26.0 41.0 44 34.83447496285222 37.0 33.0 40.0 26.0 41.0 45 34.928213169001886 37.0 33.0 40.0 27.0 41.0 46 34.833599824972424 37.0 33.0 40.0 27.0 41.0 47 34.7242404076684 36.0 33.0 40.0 26.0 41.0 48 34.715467150423436 36.0 33.0 40.0 27.0 41.0 49 34.72184836413029 36.0 33.0 40.0 27.0 41.0 50 34.4986809119666 36.0 33.0 40.0 26.0 41.0 51 33.374249067887 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 12.0 12 7.0 13 11.0 14 20.0 15 46.0 16 79.0 17 156.0 18 308.0 19 658.0 20 1314.0 21 1876.0 22 2673.0 23 3735.0 24 4691.0 25 5839.0 26 7121.0 27 8786.0 28 11320.0 29 14266.0 30 17855.0 31 22922.0 32 29114.0 33 38846.0 34 51961.0 35 52478.0 36 61378.0 37 76934.0 38 90046.0 39 44030.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.42278275613736 4.581529121124552 52.32978112436986 16.665906998368232 2 19.35823222148281 7.139301895220471 53.61276972022936 19.88969616306736 3 21.6324967866031 6.975942824325186 50.27904135938084 21.112519029690876 4 19.345834434852367 4.820368834152255 49.93099173177024 25.902804999225136 5 21.19565712827151 5.651020538392117 49.55650564737413 23.596816685962242 6 22.36031978996691 9.104168755754486 50.821626844854464 17.71388460942414 7 83.28194936962726 2.2892148372334704 10.795190388068953 3.63364540507033 8 85.39212558228574 5.056838382088845 5.738352005980109 3.8126840296452955 9 80.25834799493148 4.537225265959871 7.454169211555467 7.750257527553169 10 44.532484935777646 24.381523651512804 15.874818819110823 15.211172593598732 11 34.919277646608386 24.409418671431308 22.69196058233133 17.979343099628977 12 28.616826348942997 22.078452464515895 27.497379144370406 21.807342042170706 13 26.517224718998694 23.2296234172311 30.79464342689408 19.458508436876123 14 21.784551993217683 26.572650118052454 31.301494115609362 20.341303773120504 15 19.05211628394578 23.642032143085043 35.55211172593599 21.75373984703319 16 24.160369016472647 23.750148135318195 29.009909113284778 23.079573734924384 17 24.457551254820096 23.7268111251903 28.016992260499375 23.79864535949023 18 25.329407367567025 21.49885593954256 30.134461288822852 23.037275404067568 19 25.59559513933836 24.143230899659972 27.387986909395885 22.873187051605786 20 27.651257554901225 26.70957273216223 27.618439884408875 18.02072982852767 21 25.81200944419629 27.377594647073302 28.437605403976406 18.372790504754004 22 24.404678341249078 22.10780604756739 31.013792537626372 22.47372307355716 23 23.55688852019654 24.963125700794006 29.281384176413212 22.198601602596245 24 22.943380402381106 25.452108991130114 29.378196304365662 22.22631430212312 25 23.342115098863232 27.40275486111744 26.053583963098355 23.201546076920973 26 22.04873424068115 26.10554527471125 27.65271611803422 24.19300436657338 27 22.69888875721305 26.1511253726173 28.59075453294074 22.559231337228912 28 19.30262450203743 27.777787906688424 29.512201792209446 23.4073857990647 29 22.499977209951048 25.05209805190661 29.67045589213926 22.77746884600308 30 22.919496431078336 26.550224709882674 29.084295833067447 21.44598302597154 31 24.459374458736338 26.48386008733147 26.716683227435574 22.340082226496623 32 26.551318632232423 25.676545393219502 26.22660601474972 21.545529959798355 33 25.294219531983554 25.126120130906042 25.72011996681769 23.859540370292713 34 22.346463440203472 26.1684458098216 28.791306963727358 22.69378378624757 35 23.041104132291675 27.113594720001462 27.12581018624028 22.719490961466583 36 25.207435025570433 28.04780440668387 24.95637984630391 21.78838072144179 37 21.022999717403394 29.355953216587512 27.273672023847507 22.34737504216159 38 21.865137606315578 27.748252003245305 25.71319179193597 24.67341859850315 39 21.55063493076383 26.313208200771214 27.726191235858778 24.40996563260618 40 23.083584783540115 24.096009918229306 26.982870999206902 25.837534299023673 41 21.660391806521602 25.38228028113804 26.160423712590138 26.79690419975022 42 22.580562823048943 24.19227508500688 27.795837625459217 25.431324466484956 43 23.153960454707057 24.63093794725471 28.07569942660237 24.139402171435865 44 21.86222048004959 25.046810760549516 28.97836768553379 24.112601073867108 45 21.539513386874756 25.03350137196095 26.666362799347294 26.760622441817006 46 22.469894345333053 26.21986016025962 27.275130586980502 24.03511490742682 47 19.35294493012571 27.288986936743942 30.265731970792274 23.092336162338075 48 20.46272915394222 28.523113667648158 27.820815519111736 23.193341659297882 49 23.46299351851008 24.133750239295516 29.36762172165146 23.03563452054295 50 21.985651385179175 26.05121379800724 26.599815856404458 25.363318960409124 51 20.766657246779765 26.01657292359864 26.235904354722557 26.98086547489904 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 81.0 1 254.5 2 428.0 3 774.5 4 1121.0 5 865.0 6 609.0 7 634.0 8 659.0 9 734.0 10 809.0 11 804.0 12 799.0 13 812.0 14 825.0 15 913.0 16 1001.0 17 946.0 18 891.0 19 1083.0 20 1275.0 21 1335.0 22 1395.0 23 2096.0 24 2797.0 25 3167.5 26 4294.5 27 5051.0 28 6165.0 29 7279.0 30 8430.0 31 9581.0 32 10606.5 33 11632.0 34 13633.0 35 15634.0 36 17143.5 37 18653.0 38 19677.0 39 20701.0 40 23438.5 41 26176.0 42 27973.5 43 29771.0 44 32958.0 45 36145.0 46 44064.0 47 51983.0 48 50025.5 49 48068.0 50 47168.0 51 46268.0 52 42109.0 53 37950.0 54 36409.5 55 34869.0 56 32970.5 57 31072.0 58 28226.5 59 25381.0 60 22836.0 61 20291.0 62 18021.0 63 15751.0 64 14005.0 65 12259.0 66 10762.0 67 9265.0 68 7897.0 69 6529.0 70 5508.0 71 4487.0 72 3860.0 73 3233.0 74 2504.0 75 1481.5 76 1188.0 77 921.5 78 655.0 79 514.5 80 374.0 81 279.5 82 185.0 83 114.0 84 43.0 85 24.5 86 6.0 87 4.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 548485.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.219243411371465 #Duplication Level Percentage of deduplicated Percentage of total 1 73.63381595710672 24.460596555872566 2 9.240662793441805 6.139356532354943 3 3.22644972496149 3.2154065630414475 4 1.6641125056367365 2.211222335546161 5 1.1624531945597694 1.9307907812203664 6 0.9183064382469862 1.830326705901372 7 0.8198863162206818 1.9065202175731255 8 0.7433294549955358 1.9754273680271037 9 0.675576309531592 2.0197920482357388 >10 7.776945800585339 47.256938090623045 >50 0.09175159950883863 2.0592847189284624 >100 0.04003706160385659 2.2155598240785657 >500 0.002780351500267819 0.5454850892532938 >1k 0.003892492100374946 2.2332931693438267 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGC 3157 0.5755854763576032 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCG 2669 0.486613125244993 No Hit GAATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTC 1781 0.32471261748270236 No Hit GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 1235 0.2251656836558885 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAATCACGT 1186 0.21623198446630265 No Hit CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 1059 0.19307729473002908 No Hit CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 1003 0.18286735279907382 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 703 0.12817123531181346 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTA 662 0.1206960992552212 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.823203916242012E-4 0.0 0.0 0.20766292605996517 0.0 2 1.823203916242012E-4 0.0 0.0 0.7854362471170588 0.0 3 1.823203916242012E-4 0.0 0.0 0.9972925421843806 0.0 4 1.823203916242012E-4 0.0 0.0 1.4250161809347566 0.0 5 1.823203916242012E-4 0.0 0.0 2.3743584601219725 0.0 6 1.823203916242012E-4 0.0 0.0 2.7198556022498335 0.0 7 1.823203916242012E-4 0.0 0.0 3.1362753767195093 0.0 8 1.823203916242012E-4 0.0 0.0 3.7138663773849787 0.0 9 1.823203916242012E-4 0.0 0.0 3.933380128900517 0.0 10 1.823203916242012E-4 0.0 0.0 4.944529020848337 0.0 11 1.823203916242012E-4 0.0 0.0 5.90809229058224 0.0 12 1.823203916242012E-4 0.0 0.0 7.453622250380594 0.0 13 1.823203916242012E-4 0.0 0.0 7.777423265905175 0.0 14 1.823203916242012E-4 0.0 0.0 7.91215803531546 0.0 15 1.823203916242012E-4 0.0 0.0 8.214262924236762 0.0 16 1.823203916242012E-4 0.0 0.0 8.664047330373666 0.0 17 1.823203916242012E-4 0.0 0.0 9.227235020100823 0.0 18 1.823203916242012E-4 0.0 0.0 9.864809429610656 0.0 19 1.823203916242012E-4 0.0 0.0 10.567289898538702 0.0 20 1.823203916242012E-4 0.0 0.0 11.07796931547809 0.0 21 1.823203916242012E-4 0.0 0.0 11.736875210807952 0.0 22 1.823203916242012E-4 0.0 0.0 12.450294903233452 0.0 23 1.823203916242012E-4 0.0 0.0 13.124698031851372 0.0 24 1.823203916242012E-4 0.0 0.0 13.688068041970155 0.0 25 1.823203916242012E-4 0.0 0.0 14.198018177343044 0.0 26 1.823203916242012E-4 0.0 0.0 14.672598156740841 0.0 27 1.823203916242012E-4 0.0 0.0 15.162310728643446 0.0 28 1.823203916242012E-4 0.0 0.0 15.63816695078261 0.0 29 1.823203916242012E-4 0.0 0.0 16.18239331978085 0.0 30 1.823203916242012E-4 0.0 0.0 16.88669699262514 0.0 31 1.823203916242012E-4 0.0 0.0 17.42089574008405 0.0 32 1.823203916242012E-4 0.0 0.0 17.929751953107196 0.0 33 1.823203916242012E-4 0.0 0.0 18.4706965550562 0.0 34 1.823203916242012E-4 0.0 0.0 19.062326225876735 0.0 35 1.823203916242012E-4 0.0 0.0 19.689143732280737 0.0 36 1.823203916242012E-4 0.0 0.0 20.24649716947592 0.0 37 1.823203916242012E-4 0.0 0.0 20.811690383510943 0.0 38 1.823203916242012E-4 0.0 0.0 21.480623900380138 0.0 39 1.823203916242012E-4 0.0 0.0 22.590955085371522 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 80 0.0 45.0 6 GAATCGC 20 7.030059E-4 45.0 18 TAACGCA 25 3.88813E-5 45.0 16 AGTATCG 25 3.88813E-5 45.0 31 TACGCGG 40 6.8030204E-9 45.0 2 CGTACTA 20 7.030059E-4 45.0 34 CGTACCC 20 7.030059E-4 45.0 30 TTACGCG 20 7.030059E-4 45.0 1 TAGTCGA 20 7.030059E-4 45.0 41 AATCGTC 20 7.030059E-4 45.0 33 AATCGCG 20 7.030059E-4 45.0 19 TCGTTCG 30 2.1634187E-6 44.999996 1 CATCGGT 30 2.1634187E-6 44.999996 27 ACCGTCG 30 2.1634187E-6 44.999996 15 ACACGCG 300 0.0 41.25 36 TTTGTCG 205 0.0 40.609756 1 GTTTGCG 145 0.0 40.34483 1 TACGGCT 495 0.0 40.0 7 CGATGAA 540 0.0 40.0 19 CCGATGA 550 0.0 39.68182 18 >>END_MODULE