##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933995.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 177241 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.765838603934757 31.0 30.0 31.0 25.0 34.0 2 29.683718778386492 31.0 30.0 33.0 25.0 34.0 3 29.763243267641233 31.0 30.0 33.0 25.0 34.0 4 33.79334916864608 35.0 33.0 37.0 28.0 37.0 5 34.31756196365401 35.0 35.0 37.0 32.0 37.0 6 33.500465467922204 35.0 33.0 37.0 28.0 37.0 7 34.329506152639624 35.0 35.0 37.0 32.0 37.0 8 33.999853307079064 35.0 35.0 37.0 30.0 37.0 9 35.62715737329399 37.0 35.0 39.0 30.0 39.0 10 35.184206814450384 37.0 34.0 39.0 30.0 39.0 11 35.33493379071434 37.0 34.0 39.0 30.0 39.0 12 35.321184150394096 37.0 34.0 39.0 30.0 39.0 13 35.18922258393938 37.0 34.0 39.0 29.0 39.0 14 35.82164961831631 38.0 34.0 40.0 27.0 41.0 15 36.04681196788553 38.0 34.0 40.0 30.0 41.0 16 36.317635310114476 38.0 35.0 40.0 30.0 41.0 17 36.015724352717484 38.0 34.0 40.0 30.0 41.0 18 36.152814529369614 38.0 34.0 40.0 30.0 41.0 19 36.14917541652326 38.0 34.0 40.0 30.0 41.0 20 36.083795510068214 38.0 34.0 40.0 30.0 41.0 21 35.85805767288607 38.0 34.0 40.0 29.0 41.0 22 36.02541736957025 38.0 34.0 40.0 30.0 41.0 23 36.04013743998285 38.0 34.0 40.0 30.0 41.0 24 35.92849284307807 38.0 34.0 40.0 29.0 41.0 25 35.527744709181285 38.0 34.0 40.0 28.0 41.0 26 35.596222093082304 38.0 34.0 40.0 29.0 41.0 27 35.54479494022264 38.0 34.0 40.0 29.0 41.0 28 35.486704543531125 38.0 34.0 40.0 28.0 41.0 29 35.629239284364225 38.0 34.0 40.0 29.0 41.0 30 35.16760794624269 37.0 34.0 40.0 27.0 41.0 31 35.24759508240193 37.0 34.0 40.0 27.0 41.0 32 35.24456530938101 37.0 34.0 40.0 27.0 41.0 33 35.198368323356334 37.0 34.0 40.0 27.0 41.0 34 35.19984653663656 37.0 34.0 40.0 27.0 41.0 35 35.186277441449775 37.0 34.0 40.0 27.0 41.0 36 34.901078192968896 37.0 33.0 40.0 26.0 41.0 37 34.93581056301871 37.0 33.0 40.0 26.0 41.0 38 34.963755564457436 37.0 33.0 40.0 27.0 41.0 39 34.80409724612251 37.0 33.0 40.0 26.0 41.0 40 34.73069436529923 37.0 33.0 40.0 26.0 41.0 41 34.384651406841535 37.0 33.0 40.0 24.0 41.0 42 34.83337940995594 37.0 33.0 40.0 26.0 41.0 43 34.77910302920882 37.0 33.0 40.0 26.0 41.0 44 34.855027899865156 37.0 33.0 40.0 27.0 41.0 45 34.99231554775701 37.0 33.0 40.0 27.0 41.0 46 34.81153909084241 37.0 33.0 40.0 26.0 41.0 47 34.64395371274141 37.0 33.0 40.0 26.0 41.0 48 34.71316456124712 37.0 33.0 40.0 26.0 41.0 49 34.773274806619234 37.0 33.0 40.0 26.0 41.0 50 34.49795476216 36.0 33.0 40.0 26.0 41.0 51 33.47370529392184 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 3.0 11 4.0 12 2.0 13 8.0 14 2.0 15 11.0 16 14.0 17 38.0 18 92.0 19 116.0 20 290.0 21 465.0 22 803.0 23 1047.0 24 1431.0 25 1764.0 26 2389.0 27 2928.0 28 3722.0 29 4862.0 30 6413.0 31 7901.0 32 10120.0 33 13308.0 34 17400.0 35 18313.0 36 21253.0 37 25264.0 38 26852.0 39 10423.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.31806974684187 4.202187981336147 50.60341568824369 19.87632658357829 2 16.926670465637184 10.384166191795352 53.030619326228134 19.658544016339334 3 19.76799950350088 9.992608933598886 49.721001348446464 20.518390214453767 4 19.29745374941464 4.22532032656101 50.783960821706046 25.693265102318314 5 22.30353022156273 5.551198650425127 47.01113173588504 25.134139392127103 6 20.16181357586563 11.605102656834479 49.45808249784192 18.77500126945797 7 75.87070711629927 2.479674567396934 16.37600780857702 5.273610507726768 8 75.868450302131 7.7640049424230275 9.079163398987818 7.288381356458156 9 70.27719320021892 5.357112631953104 12.050259251527581 12.315434916300404 10 39.837283698467054 26.23151528145294 18.494027905507192 15.437173114572813 11 31.7353208343442 24.952465851580616 25.113263861070518 18.198949453004666 12 26.14914156431074 19.70311609616285 31.672694241174447 22.47504809835196 13 24.394468548473547 23.877093900395508 33.450499602236505 18.277937948894444 14 19.7358399016029 29.2979615326025 29.09315564683115 21.873042918963446 15 15.846784886115515 24.550752929626892 38.4504713920594 21.151990792198195 16 17.15235188246512 23.598941554155076 32.643688537076635 26.605018026303167 17 17.788773477919896 24.94287439136543 31.23882171732274 26.02953041339193 18 19.017608792548 22.976060843709977 32.44678150089426 25.55954886284776 19 20.839986233433574 25.131318374416757 29.73296246353835 24.295732928611326 20 24.672620894713976 24.365129964285916 32.43606163359494 18.52618750740517 21 24.03168567092264 28.085488120694425 28.003678607094294 19.87914760128864 22 20.692729108953344 24.255110273582297 30.21253547429771 24.83962514316665 23 20.873274242415693 26.826750018336615 28.61414683961386 23.685828899633833 24 21.95880185735806 23.719116908615952 29.586269542600192 24.7358116914258 25 18.312918568502774 28.3010138737651 27.2515952855152 26.134472272216925 26 17.49538763604358 26.366359928007626 29.63930467555475 26.49894776039404 27 19.40803764366033 29.265801930704523 27.796615907154663 23.529544518480485 28 16.709452101940293 26.367488335091764 31.796254816887743 25.126804746080193 29 21.33479273982882 23.320225004372578 28.588757680220716 26.756224575577885 30 20.77228180838519 28.446014184077047 27.86826975699753 22.913434250540224 31 22.6781613734971 25.65772027916791 26.083693953430643 25.580424393904345 32 25.722039482963876 27.28883271929181 25.089567312303586 21.899560485440727 33 22.72668287811511 24.74314633747271 27.356537144340194 25.17363364007199 34 21.672750661528653 22.913998454082297 29.013038743857233 26.40021214053182 35 21.75343176804464 24.442990053091552 26.77258647829791 27.0309917005659 36 21.78389875931641 25.55898465930569 27.371206436434008 25.28591014494389 37 21.04986995108355 27.443988693361014 29.8085657381757 21.697575617379723 38 23.093415180460504 25.50256430509871 25.239081250952093 26.164939263488694 39 24.602095451955247 23.688085713802113 30.126212332361025 21.58360650188162 40 26.06169001528992 21.982498406124993 28.520489051630264 23.435322526954824 41 19.57729870628128 23.56170412037847 29.868371313635105 26.99262585970515 42 22.838959382987007 22.982831286214815 28.664360954858076 25.513848375940107 43 22.22849115046744 22.971547215373416 28.699341574466402 26.100620059692737 44 20.865375392826717 23.464096907600386 28.837007238731445 26.833520460841452 45 22.049638627631303 21.99321827342432 26.335892936735856 29.62125016220852 46 25.11721328586501 24.023222617791596 28.704419406345032 22.155144689998362 47 19.95982870780463 23.530108722022558 32.97656862689784 23.533493943274976 48 20.98893596854001 23.013862481028653 30.283625120598508 25.713576429832823 49 22.809056595257303 20.006657601796423 33.8302085860495 23.35407721689677 50 23.257598411202824 20.386366585609426 30.38236074046073 25.97367426272702 51 20.44165853273227 21.447069244700717 27.39828820645336 30.712984016113655 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 73.0 1 142.5 2 212.0 3 346.0 4 480.0 5 379.5 6 279.0 7 292.0 8 305.0 9 353.0 10 401.0 11 432.0 12 463.0 13 490.5 14 518.0 15 497.5 16 477.0 17 460.0 18 443.0 19 549.5 20 656.0 21 656.5 22 657.0 23 773.0 24 889.0 25 1124.0 26 1569.5 27 1780.0 28 1981.5 29 2183.0 30 2484.0 31 2785.0 32 3101.0 33 3417.0 34 3630.0 35 3843.0 36 4317.0 37 4791.0 38 5091.5 39 5392.0 40 6459.5 41 7527.0 42 8254.0 43 8981.0 44 9845.0 45 10709.0 46 11547.5 47 12386.0 48 17561.5 49 22737.0 50 22163.5 51 21590.0 52 20314.5 53 19039.0 54 15578.5 55 12118.0 56 10363.0 57 8608.0 58 7515.5 59 6423.0 60 5751.5 61 5080.0 62 4287.0 63 3494.0 64 3097.0 65 2700.0 66 2136.5 67 1573.0 68 1281.5 69 990.0 70 876.5 71 763.0 72 625.0 73 487.0 74 422.0 75 249.5 76 142.0 77 103.5 78 65.0 79 60.0 80 55.0 81 30.0 82 5.0 83 6.0 84 7.0 85 4.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 177241.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.10468796723106 #Duplication Level Percentage of deduplicated Percentage of total 1 74.70604423096168 33.69592814303688 2 10.02326628640048 9.04192596521121 3 4.0290703492444715 5.451898827020836 4 2.3541479035324726 4.247324264701733 5 1.6724206944861404 3.7717006787368614 6 1.3797158010607424 3.7338990414181823 7 1.1107775442809968 3.5070892175061075 8 0.8555989192434703 3.0873217822061485 9 0.6779745822075454 2.752184878216666 >10 3.097168017612329 20.863682782200506 >50 0.05628940258180727 1.714614564350235 >100 0.02751926348443911 2.308156690607704 >500 0.002501751225858101 0.8637956229089206 >1k 0.007505253677574302 4.960477541878007 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGC 2245 1.2666369519467844 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCG 1707 0.963095446313212 No Hit CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 1542 0.8700018618716889 No Hit GAATCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTC 1179 0.665195976100338 No Hit CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGCT 1115 0.6290869494078684 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 1004 0.5664603562381165 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCACGGTGTT 879 0.4959349134793868 No Hit TCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 652 0.3678607094295338 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTA 490 0.27645973561422016 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTC 331 0.18675137242511608 No Hit GAACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT 307 0.17321048741543998 No Hit GAATGACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCT 278 0.1568485846954147 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCC 242 0.1365372571809006 No Hit CGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG 235 0.13258783238641172 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 228 0.12863840759192285 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6973555779983187 0.0 2 0.0 0.0 0.0 2.761212134889783 0.0 3 0.0 0.0 0.0 3.401583155139048 0.0 4 0.0 0.0 0.0 4.526605018026303 0.0 5 0.0 0.0 0.0 6.666064849555125 0.0 6 0.0 0.0 0.0 7.497136667023995 0.0 7 0.0 0.0 0.0 8.497469547113816 0.0 8 0.0 0.0 0.0 9.893873313736664 0.0 9 0.0 0.0 0.0 10.450178006217524 0.0 10 0.0 0.0 0.0 12.57045491731597 0.0 11 0.0 0.0 0.0 14.441918066361621 0.0 12 0.0 0.0 0.0 17.848579053379297 0.0 13 0.0 0.0 0.0 18.63282197685637 0.0 14 0.0 0.0 0.0 18.968523084387925 0.0 15 0.0 0.0 0.0 19.652901980918635 0.0 16 0.0 0.0 0.0 20.636308754746363 0.0 17 0.0 0.0 0.0 21.996039291134668 0.0 18 0.0 0.0 0.0 23.492871288245947 0.0 19 0.0 0.0 0.0 25.0500730643587 0.0 20 0.0 0.0 0.0 26.12149559074932 0.0 21 0.0 0.0 0.0 27.36500019747124 0.0 22 0.0 0.0 0.0 28.57916622000553 0.0 23 0.0 0.0 0.0 29.68218414475206 0.0 24 0.0 0.0 0.0 30.558956449128587 0.0 25 0.0 0.0 0.0 31.295242071529724 0.0 26 0.0 0.0 0.0 32.014037384126695 0.0 27 0.0 0.0 0.0 32.70462251962018 0.0 28 0.0 0.0 0.0 33.435830310142684 0.0 29 0.0 0.0 0.0 34.182835799843154 0.0 30 0.0 0.0 0.0 35.03196213065826 0.0 31 0.0 0.0 0.0 35.820154478929815 0.0 32 0.0 0.0 0.0 36.516381649844 0.0 33 0.0 0.0 0.0 37.22220028097336 0.0 34 0.0 0.0 0.0 37.92689050501859 0.0 35 0.0 0.0 0.0 38.678409623055614 0.0 36 0.0 0.0 0.0 39.38817767897947 0.0 37 0.0 0.0 0.0 40.11374343408128 0.0 38 0.0 0.0 0.0 40.80037914478027 0.0 39 0.0 0.0 0.0 41.50281255465722 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGAGT 30 2.1550823E-6 45.000004 10 GCTTGCG 30 2.1550823E-6 45.000004 1 TGGTTGA 30 2.1550823E-6 45.000004 14 CCTCACC 30 2.1550823E-6 45.000004 30 TTACGGG 60 0.0 45.000004 3 TTGTGCG 25 3.877417E-5 45.0 1 CCGATCG 20 7.0171274E-4 45.0 40 CGTGCGG 20 7.0171274E-4 45.0 2 TTAGCGG 25 3.877417E-5 45.0 2 GGCACGA 25 3.877417E-5 45.0 8 TTTGTCG 55 1.8189894E-12 45.0 1 TTTCGAG 20 7.0171274E-4 45.0 1 GCACGAT 25 3.877417E-5 45.0 9 CACGATC 25 3.877417E-5 45.0 10 ATATGGC 25 3.877417E-5 45.0 23 TGCGGGC 45 3.8016879E-10 45.0 4 CGGGCTC 20 7.0171274E-4 45.0 6 GTACTTA 20 7.0171274E-4 45.0 19 TACTCAC 25 3.877417E-5 45.0 30 CGCACTT 20 7.0171274E-4 45.0 35 >>END_MODULE