##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933994.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1075013 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.113162352455273 31.0 30.0 31.0 26.0 34.0 2 30.39690868854609 31.0 30.0 33.0 27.0 34.0 3 30.44179837825217 31.0 30.0 34.0 26.0 34.0 4 34.13206630989579 35.0 33.0 37.0 30.0 37.0 5 34.51918162850124 35.0 35.0 37.0 32.0 37.0 6 34.02896988222468 35.0 35.0 37.0 30.0 37.0 7 34.48198486902019 35.0 35.0 37.0 32.0 37.0 8 34.63336722439636 35.0 35.0 37.0 32.0 37.0 9 35.98070627983103 37.0 35.0 39.0 31.0 39.0 10 35.35584871996897 37.0 34.0 39.0 30.0 39.0 11 35.49751584399444 37.0 35.0 39.0 30.0 39.0 12 35.475433320341246 37.0 35.0 39.0 30.0 39.0 13 35.46176092754227 37.0 35.0 39.0 30.0 39.0 14 36.04353156659501 38.0 35.0 40.0 29.0 41.0 15 36.30653768838144 38.0 35.0 40.0 30.0 41.0 16 36.458543292034605 38.0 35.0 40.0 31.0 41.0 17 36.24421844200954 38.0 35.0 40.0 30.0 41.0 18 36.361719346649764 38.0 35.0 40.0 30.0 41.0 19 36.33106483363457 38.0 35.0 40.0 30.0 41.0 20 36.35717893644077 38.0 35.0 40.0 30.0 41.0 21 36.06402620247383 38.0 34.0 40.0 30.0 41.0 22 36.27745617959969 38.0 34.0 40.0 30.0 41.0 23 36.37364571405183 38.0 35.0 40.0 30.0 41.0 24 36.27850081812964 38.0 35.0 40.0 30.0 41.0 25 35.83642802459133 38.0 34.0 40.0 29.0 41.0 26 35.94031234971112 38.0 34.0 40.0 30.0 41.0 27 35.993299615911624 38.0 34.0 40.0 30.0 41.0 28 35.876853582235746 38.0 34.0 40.0 29.0 41.0 29 35.95790469510601 38.0 34.0 40.0 30.0 41.0 30 35.519385346967894 38.0 34.0 40.0 28.0 41.0 31 35.612168410986655 38.0 34.0 40.0 29.0 41.0 32 35.636432303609354 38.0 34.0 40.0 29.0 41.0 33 35.66014364477453 38.0 34.0 40.0 29.0 41.0 34 35.57087216619706 38.0 34.0 40.0 29.0 41.0 35 35.558989519196516 38.0 34.0 40.0 29.0 41.0 36 35.34124331519712 38.0 34.0 40.0 28.0 41.0 37 35.39811239491988 38.0 34.0 40.0 28.0 41.0 38 35.271158581338085 37.0 34.0 40.0 28.0 41.0 39 35.20014827727665 37.0 34.0 40.0 27.0 41.0 40 35.09401932813836 37.0 34.0 40.0 27.0 41.0 41 34.96383950705712 37.0 33.0 40.0 27.0 41.0 42 35.17288256048997 37.0 34.0 40.0 28.0 41.0 43 35.129672850467855 37.0 34.0 40.0 27.0 41.0 44 35.07137774147848 37.0 33.0 40.0 27.0 41.0 45 35.15238141306198 37.0 34.0 40.0 28.0 41.0 46 35.061563906669036 37.0 34.0 40.0 28.0 41.0 47 35.00410785730033 37.0 33.0 40.0 28.0 41.0 48 34.95436334258283 36.0 33.0 40.0 28.0 41.0 49 34.94433276620841 36.0 33.0 40.0 28.0 41.0 50 34.76124009663139 36.0 33.0 40.0 27.0 41.0 51 33.59947740166863 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 12.0 11 14.0 12 18.0 13 16.0 14 33.0 15 64.0 16 133.0 17 216.0 18 497.0 19 1004.0 20 1736.0 21 2879.0 22 3920.0 23 5562.0 24 7542.0 25 10175.0 26 13012.0 27 16352.0 28 20367.0 29 26430.0 30 33522.0 31 42896.0 32 55659.0 33 73492.0 34 99114.0 35 103267.0 36 126541.0 37 159049.0 38 184228.0 39 87257.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.992721018257456 4.269901852349692 54.22046058977892 16.51691653961394 2 19.8127836593604 5.081892032933555 53.97534727487017 21.129977032835882 3 21.357323120743658 5.085519896038466 52.296483856474296 21.260673126743583 4 20.161058517431883 4.475666805889789 47.76463168352383 27.598642993154503 5 19.291301593562125 5.261703811953902 50.048418019130935 25.398576575353044 6 22.64028435004972 7.201215241118014 51.74951372681075 18.40898668202152 7 84.1225175881594 2.296809433932427 9.629557968136199 3.951115009771975 8 86.22639912261526 3.552701223147999 6.0711823950035955 4.149717259233144 9 80.82646442415114 5.033334480606281 8.011903111869344 6.1282979833732245 10 42.652879546572926 27.114555823976083 14.994237278991045 15.238327350459949 11 32.29309785090971 23.239253850883664 24.316636170911423 20.151012127295203 12 26.990092212838356 21.157232517188167 30.219448508994773 21.633226760978705 13 26.610468896655203 21.44662436640301 31.457852137602053 20.485054599339726 14 21.48485646220092 23.734038565115025 32.970391985957384 21.81071298672667 15 19.93213105329889 21.991734053448656 35.586453373122 22.489681520130453 16 25.301275426436703 22.179173647202404 29.96168418428428 22.55786674207661 17 25.339228455841926 22.378706117972527 28.572770747888633 23.709294678296914 18 26.121730620932027 21.158906915544275 29.382063286676534 23.337299176847164 19 25.61392280837534 23.483157878090775 27.29846057675582 23.604458736778067 20 27.493341940981182 25.08239435244039 27.5602248530948 19.86403885348363 21 26.887209736068307 25.06360388199957 28.186728904673714 19.862457477258413 22 25.3878790303001 21.233789730914882 29.881592129583552 23.49673910920147 23 24.50528505236681 23.381112600498785 28.82616303244705 23.287439314687358 24 24.452727548411044 24.0651973511018 28.167938434232887 23.314136666254267 25 24.55486584813393 25.04667385417665 26.236705974718443 24.161754322970978 26 22.46614692101398 24.125661736183655 27.517806761406604 25.890384581395757 27 22.384566512218925 23.331066694077187 29.887080435306363 24.397286358397526 28 20.318265918644705 24.89402453737769 29.422062802961452 25.365646741016157 29 21.917130304470735 24.471518018851864 29.63396721714063 23.97738445953677 30 24.583330620187848 23.52520388125539 29.816662682218727 22.074802816338035 31 25.525551784024934 23.95310568337313 27.75268764191689 22.768654890685042 32 25.964709263980996 24.356728709327236 27.18283406805313 22.49572795863864 33 25.52145881026555 23.845944188581907 26.3971691505126 24.235427850639944 34 22.694795318754284 23.90547835235481 29.61629301227055 23.783433316620357 35 22.25061464372989 25.48899408658314 29.019742086839877 23.240649182847093 36 24.433099878792163 26.425633922566515 27.068323824921187 22.07294237372013 37 23.084092936550533 26.11726555864906 27.87436058912776 22.92428091567265 38 24.054406783917962 26.85009390584114 26.43195942746739 22.663539882773513 39 23.10651127009627 24.97932583140855 26.881349341821913 25.03281355667327 40 23.692364650473994 24.78118869260186 27.43101711328142 24.095429543642727 41 21.406810894379884 24.49049453355448 26.803768884655348 27.298925687410293 42 22.432007798975455 24.699701305937698 28.49974837513593 24.36854251995092 43 23.281578920440964 22.99693119990177 29.064206665407767 24.6572832142495 44 23.264183781963567 22.45144942433254 29.363272816235707 24.92109397746818 45 22.521774155289283 22.546518042107397 27.876593120269245 27.055114682334075 46 22.925118114850704 23.86947878769838 28.835000134882087 24.370402962568825 47 20.191383732103706 25.33457734929717 31.038601393657565 23.43543752494156 48 21.234533907962046 25.811873902920247 29.588107306609317 23.365484882508397 49 23.235067854993382 23.619249255590397 30.1036359560303 23.042046933385922 50 22.32214866238827 23.912734078564633 28.347285102598757 25.417832156448338 51 21.37629963544627 24.358868218337825 27.207577954871244 27.057254191344665 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 188.0 1 544.5 2 901.0 3 2379.0 4 3857.0 5 2793.5 6 1730.0 7 1725.5 8 1721.0 9 1773.0 10 1825.0 11 1903.0 12 1981.0 13 2033.5 14 2086.0 15 1921.5 16 1757.0 17 1929.0 18 2101.0 19 2226.5 20 2352.0 21 2628.5 22 2905.0 23 3434.5 24 3964.0 25 4927.0 26 7538.5 27 9187.0 28 10506.5 29 11826.0 30 13629.0 31 15432.0 32 17707.0 33 19982.0 34 22623.0 35 25264.0 36 28183.0 37 31102.0 38 33788.0 39 36474.0 40 41135.0 41 45796.0 42 51048.5 43 56301.0 44 68762.0 45 81223.0 46 86336.0 47 91449.0 48 92154.5 49 92860.0 50 85626.0 51 78392.0 52 75008.5 53 71625.0 54 68523.5 55 65422.0 56 64073.5 57 62725.0 58 60778.0 59 58831.0 60 53706.5 61 48582.0 62 44138.0 63 39694.0 64 36491.5 65 33289.0 66 28332.0 67 23375.0 68 19645.0 69 15915.0 70 13359.5 71 10804.0 72 8821.0 73 6838.0 74 5783.5 75 3592.0 76 2455.0 77 1900.0 78 1345.0 79 935.5 80 526.0 81 348.5 82 171.0 83 138.5 84 106.0 85 64.5 86 23.0 87 16.5 88 10.0 89 6.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1075013.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.225213311132705 #Duplication Level Percentage of deduplicated Percentage of total 1 73.20513688701202 23.590511516546318 2 9.692148106015477 6.246630803188792 3 3.4421514364983126 3.3277219287113997 4 1.724090682377308 2.2223676002938033 5 1.132209661479218 1.8242848927046573 6 0.8716008547486394 1.6852514079864298 7 0.7748197187535141 1.7478111500152687 8 0.706017827442255 1.8201260072631322 9 0.6226837130423246 1.805950393034135 >10 7.641557879175213 47.39221431797475 >50 0.126128944700594 2.6779653342907004 >100 0.054723580939844085 3.0289403322067017 >500 0.00409695258318846 0.9042781171005699 >1k 0.0026337552320497247 1.7259461986833486 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 2927 0.272275777130137 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 2596 0.24148545180383865 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 2335 0.21720667564020155 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2188 0.20353242239861286 No Hit GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 1970 0.1832535978634677 No Hit CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 1923 0.17888155771139513 No Hit CTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCT 1786 0.166137525778758 No Hit TCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 1463 0.13609137749962094 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGTACAGT 1114 0.10362665381720966 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18027688967482253 0.0 2 0.0 0.0 0.0 0.7368282988205724 0.0 3 0.0 0.0 0.0 0.9790579276715723 0.0 4 0.0 0.0 0.0 1.4435174272311126 0.0 5 0.0 0.0 0.0 2.309553465865064 0.0 6 0.0 0.0 0.0 2.8048032907509026 0.0 7 0.0 0.0 0.0 3.281448689457709 0.0 8 0.0 0.0 0.0 3.9891610613080957 0.0 9 0.0 0.0 0.0 4.321529134996507 0.0 10 0.0 0.0 0.0 5.175472296614087 0.0 11 0.0 0.0 0.0 6.282156587873821 0.0 12 0.0 0.0 0.0 7.627907755534119 0.0 13 0.0 0.0 0.0 8.006507828277426 0.0 14 0.0 0.0 0.0 8.16194780900324 0.0 15 0.0 0.0 0.0 8.424084173865804 0.0 16 0.0 0.0 0.0 8.855706861219353 0.0 17 0.0 0.0 0.0 9.509931507805021 0.0 18 0.0 0.0 0.0 10.196992966596683 0.0 19 0.0 0.0 0.0 10.801357751022545 0.0 20 0.0 0.0 0.0 11.399024942023956 0.0 21 0.0 0.0 0.0 12.147853095730005 0.0 22 0.0 0.0 0.0 12.957145634517909 0.0 23 0.0 0.0 0.0 13.693322778422214 0.0 24 0.0 0.0 0.0 14.281315667810528 0.0 25 0.0 0.0 0.0 14.806983729499086 0.0 26 0.0 0.0 0.0 15.303163775693875 0.0 27 0.0 0.0 0.0 15.805948393182222 0.0 28 0.0 0.0 0.0 16.328081613896764 0.0 29 0.0 0.0 0.0 16.90277233856707 0.0 30 0.0 0.0 0.0 17.61597301614027 0.0 31 0.0 0.0 0.0 18.21494251697421 0.0 32 0.0 0.0 0.0 18.79921452112672 0.0 33 0.0 0.0 0.0 19.374463378582398 0.0 34 0.0 0.0 0.0 19.97687469825946 0.0 35 0.0 0.0 0.0 20.65035492594043 0.0 36 0.0 0.0 0.0 21.259835927565526 0.0 37 0.0 0.0 0.0 21.87322385868822 0.0 38 0.0 0.0 0.0 22.566982910904333 0.0 39 0.0 0.0 0.0 23.652179089927284 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTAA 40 6.8139343E-9 45.0 30 GCGTACG 20 7.0330827E-4 45.0 1 TCCCGTA 45 1.9281288E-8 40.0 29 CCGATGA 445 0.0 39.94382 18 GCGTTAG 40 3.4579352E-7 39.375 1 ACACGCG 790 0.0 39.303795 36 GATCGTA 35 6.247912E-6 38.571426 9 CACGCGG 820 0.0 38.140244 37 CGTTTTT 1310 0.0 38.129772 1 TGGGCGA 1570 0.0 38.121017 6 TTTGGGC 2345 0.0 38.091686 4 CCGTTTG 130 0.0 38.07692 1 TCGTTTG 445 0.0 37.92135 1 TTACACG 840 0.0 37.76786 34 TACACGC 840 0.0 37.500004 35 CGCGGAT 30 1.139873E-4 37.499996 23 CGTCGTT 30 1.139873E-4 37.499996 11 TACCGGT 60 1.546141E-10 37.499996 40 TTCGGGC 505 0.0 37.425743 4 CTTGGGA 2830 0.0 37.287987 4 >>END_MODULE