##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933993.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 755555 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.973489686389474 31.0 30.0 31.0 26.0 34.0 2 29.738670249022242 31.0 30.0 33.0 25.0 34.0 3 29.894044775032924 31.0 30.0 34.0 25.0 34.0 4 33.89821389574551 35.0 33.0 37.0 28.0 37.0 5 34.43510134933923 35.0 35.0 37.0 32.0 37.0 6 33.753209230300904 35.0 33.0 37.0 28.0 37.0 7 34.41085691974774 35.0 35.0 37.0 32.0 37.0 8 34.22432781200575 35.0 35.0 37.0 30.0 37.0 9 35.89012580156309 37.0 35.0 39.0 31.0 39.0 10 35.2860360926736 37.0 34.0 39.0 30.0 39.0 11 35.343976282335504 37.0 35.0 39.0 30.0 39.0 12 35.42290104625077 37.0 35.0 39.0 30.0 39.0 13 35.37833513112877 37.0 35.0 39.0 30.0 39.0 14 36.04735724070385 38.0 35.0 40.0 29.0 41.0 15 36.28242285472269 38.0 35.0 40.0 30.0 41.0 16 36.54417481189324 38.0 35.0 40.0 31.0 41.0 17 36.21730118919205 38.0 34.0 40.0 30.0 41.0 18 36.3942929369801 38.0 35.0 40.0 30.0 41.0 19 36.361157030262525 38.0 35.0 40.0 30.0 41.0 20 36.17855616070306 38.0 34.0 40.0 30.0 41.0 21 35.957105703754195 38.0 34.0 40.0 29.0 41.0 22 36.20231485464328 38.0 34.0 40.0 30.0 41.0 23 36.07915373467186 38.0 34.0 40.0 30.0 41.0 24 36.110512140082456 38.0 34.0 40.0 30.0 41.0 25 35.72403729708625 38.0 34.0 40.0 29.0 41.0 26 35.821003103678756 38.0 34.0 40.0 29.0 41.0 27 35.68091535361423 38.0 34.0 40.0 29.0 41.0 28 35.512572876891824 38.0 34.0 40.0 27.0 41.0 29 35.673103877282266 38.0 34.0 40.0 29.0 41.0 30 35.249574154098646 38.0 34.0 40.0 27.0 41.0 31 35.37769321889207 38.0 34.0 40.0 27.0 41.0 32 35.26418195895732 38.0 34.0 40.0 26.0 41.0 33 35.19443720179206 38.0 34.0 40.0 26.0 41.0 34 35.091167419976045 38.0 34.0 40.0 26.0 41.0 35 35.15599129117007 38.0 34.0 40.0 26.0 41.0 36 34.84508870962405 38.0 33.0 40.0 25.0 41.0 37 34.81667780638074 38.0 33.0 40.0 25.0 41.0 38 34.717370674537264 38.0 33.0 40.0 24.0 41.0 39 34.71347949520551 37.0 33.0 40.0 24.0 41.0 40 34.862634751937314 37.0 33.0 40.0 26.0 41.0 41 34.63582134986864 37.0 33.0 40.0 24.0 41.0 42 34.68822918252146 38.0 33.0 40.0 24.0 41.0 43 34.745127753770404 38.0 33.0 40.0 25.0 41.0 44 34.82250001654413 37.0 33.0 40.0 26.0 41.0 45 34.737516130526565 37.0 33.0 40.0 25.0 41.0 46 34.75908438167969 37.0 33.0 40.0 25.0 41.0 47 34.56073085347857 37.0 33.0 40.0 24.0 41.0 48 34.601829118992 37.0 33.0 40.0 25.0 41.0 49 34.53028700756398 37.0 33.0 40.0 24.0 41.0 50 34.38891940361721 37.0 33.0 40.0 24.0 41.0 51 33.36935630099728 36.0 32.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 15.0 11 16.0 12 10.0 13 11.0 14 19.0 15 26.0 16 74.0 17 206.0 18 535.0 19 1182.0 20 2410.0 21 4235.0 22 5912.0 23 7812.0 24 8896.0 25 10071.0 26 11017.0 27 12144.0 28 14393.0 29 18067.0 30 23438.0 31 29527.0 32 37400.0 33 48349.0 34 64759.0 35 67717.0 36 81586.0 37 104096.0 38 130517.0 39 71108.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.02146104519195 3.7499586396754707 52.14617069571374 17.082409619418836 2 17.069571374684834 11.918788175579541 52.51980332338479 18.491837126350827 3 19.085572857038866 11.755993938230837 50.859831514582 18.298601690148303 4 17.334806863828575 4.066679460793721 54.99056984600724 23.607943829370463 5 23.891046978711014 4.87628299726691 48.80438882675649 22.428281197265587 6 19.776720424059135 12.084758885852121 51.402743678487994 16.735777011600746 7 80.44708856403571 1.2873980054397098 15.033584583518076 3.2319288470065053 8 83.24569356300997 7.972814685893151 5.499268749462316 3.28222300163456 9 78.30971934538186 3.1489434918702144 6.924710974052187 11.616626188695726 10 44.895077128733185 19.4363084090503 17.524601121030237 18.14401334118628 11 33.67789241021501 25.698327719358616 23.392473082700796 17.23130678772558 12 25.391930435242966 23.6328262006075 27.527314358319384 23.44792900583015 13 27.564373209097948 23.128958183057488 31.325052444891504 17.98161616295306 14 20.504132723627002 30.082654472540053 30.211831038111058 19.201381765721887 15 18.31779288073006 24.10109125080239 34.249789889551394 23.331325978916162 16 20.525838621940164 24.45010621331339 29.43862458722396 25.585430577522484 17 21.811383684840948 27.413755451290772 29.291448008417653 21.483412855450627 18 21.907869049903713 22.66863431517229 30.21288986241902 25.210606772504978 19 22.655134305245813 24.3231796493968 28.116550085698595 24.905135959658793 20 26.78666675490203 26.172283950208787 29.045271356817175 17.995777938072013 21 23.765841004294856 29.64853650627684 28.511623905605816 18.073998583822487 22 22.307839932235243 22.23372223067811 33.474068730932885 21.984369106153753 23 23.693443892238157 25.657298277425205 29.120050823566785 21.52920700676986 24 20.241147236137675 28.72947700696839 28.995241908266113 22.034133848627828 25 20.58208866330049 31.025140459662104 26.951181581751165 21.441589295286246 26 20.71139758190999 25.595754114525082 30.538610690154922 23.154237613410007 27 23.98885587415873 26.23528399653235 27.791226317078177 21.984633812230744 28 18.937205100886104 28.53677098291984 30.81033147818491 21.715692438009146 29 22.236236938409515 24.34515025378695 31.76036158850117 21.658251219302368 30 22.04167797182204 28.891477126086123 29.589904110223607 19.47694079186823 31 22.916266850196212 24.96337129659654 28.120653029891933 23.99970882331531 32 25.87660726221122 27.391255434746643 26.932255097246394 19.79988220579574 33 24.722885825651343 24.607473976083803 28.16591776905718 22.503722429207667 34 22.36819291778891 24.827047666946815 29.325462739310836 23.47929667595344 35 23.637855616070304 25.688533594509995 27.43056428717962 23.243046502240077 36 23.119428764285857 28.31494729040242 27.573240862677107 20.992383082634618 37 21.457736365982623 27.066593431318697 28.75316820085897 22.722502001839707 38 20.64508870962405 26.510445963563207 28.113770671890197 24.73069465492254 39 20.447882682266677 28.98822719722588 28.584418076777997 21.979472043729444 40 20.482559178352336 23.954179378073075 29.941169074389023 25.622092369185566 41 19.937264659753424 25.60726882887414 28.52446215033982 25.931004361032617 42 21.652162979531603 25.104459635632086 28.919403617208545 24.32397376762777 43 22.07185446459887 27.087372858362396 27.670255639893853 23.17051703714488 44 22.62985487489329 24.5714739496132 30.273110494934187 22.525560680559323 45 21.762942472751817 24.082694178451604 28.425594430584137 25.72876891821244 46 23.19711999788235 27.471593729113035 27.455711364493652 21.875574908510963 47 18.76819027072814 27.364123061855196 31.856052835332964 22.0116338320837 48 20.47011799273382 27.09571109978757 30.030375022334578 22.403795885144035 49 22.09210447948859 23.99639999735294 31.544493782716014 22.367001740442458 50 21.5824129282448 25.455327540682017 29.27913917583763 23.683120355235555 51 20.295941394074553 24.855238864146223 29.070683140208192 25.778136601571028 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 85.0 1 239.0 2 393.0 3 1434.0 4 2475.0 5 1836.5 6 1198.0 7 1194.0 8 1190.0 9 1207.0 10 1224.0 11 1213.0 12 1202.0 13 1209.0 14 1216.0 15 1186.5 16 1157.0 17 1218.5 18 1280.0 19 1421.0 20 1562.0 21 1924.0 22 2286.0 23 2589.5 24 2893.0 25 3953.0 26 5938.0 27 6863.0 28 8544.5 29 10226.0 30 11966.5 31 13707.0 32 16513.0 33 19319.0 34 21428.0 35 23537.0 36 25175.0 37 26813.0 38 30409.5 39 34006.0 40 36702.5 41 39399.0 42 43325.0 43 47251.0 44 66449.0 45 85647.0 46 78771.5 47 71896.0 48 70045.5 49 68195.0 50 62179.0 51 56163.0 52 53168.0 53 50173.0 54 48163.5 55 46154.0 56 41283.5 57 36413.0 58 32274.5 59 28136.0 60 25222.5 61 22309.0 62 18673.0 63 15037.0 64 12890.0 65 10743.0 66 9102.0 67 7461.0 68 6002.0 69 4543.0 70 4021.5 71 3500.0 72 2837.0 73 2174.0 74 1781.5 75 1036.0 76 683.0 77 529.0 78 375.0 79 256.0 80 137.0 81 100.5 82 64.0 83 58.0 84 52.0 85 33.0 86 14.0 87 7.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 755555.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.132442550468205 #Duplication Level Percentage of deduplicated Percentage of total 1 73.84405381814851 23.727898170053393 2 8.119493827895381 5.217983379274591 3 2.833463855593427 2.731383436760518 4 1.6382641249214593 2.1056571150612746 5 1.218792146081699 1.9581384307466028 6 1.0387225535933018 2.0026015667527446 7 0.9436762517393412 2.122583606167889 8 0.8968861917015329 2.305531522332618 9 0.8615114622322615 2.4914220810073204 >10 8.477561997875084 46.21991908642246 >50 0.08574630465779519 1.8347198418898207 >100 0.033461972448193926 1.8324350057948973 >500 0.0029279225892169685 0.5802128443609044 >1k 0.004182746556024241 2.27609555692655 >5k 0.0012548239668072722 2.593418356448462 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC 6934 0.9177359689235066 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 6363 0.8421623839429293 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG 5999 0.7939858779307927 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTATTCAT 3246 0.4296179629543846 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 2076 0.2747649079153735 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT 1876 0.24829430021639723 No Hit GAACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 1645 0.21772074832407964 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTC 1556 0.2059413278980352 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTATTCATCGTA 1464 0.19376484835650615 No Hit CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1360 0.1800001323530385 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1316 0.17417659865926371 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT 1288 0.17047071358140706 No Hit CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 1108 0.14664716665232844 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCCATCGAATGC 770 0.10191183964105856 No Hit TCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 766 0.10138242748707904 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16080894177128072 0.0 2 0.0 0.0 0.0 0.7886917563909973 0.0 3 0.0 0.0 0.0 1.0005889710213023 0.0 4 0.0 0.0 0.0 1.5187511167287624 0.0 5 0.0 0.0 0.0 2.924869797698381 0.0 6 0.0 0.0 0.0 3.5290614184275135 0.0 7 0.0 0.0 0.0 4.021414721628472 0.0 8 0.0 0.0 0.0 4.663856370482625 0.0 9 0.0 0.0 0.0 4.861062397839999 0.0 10 0.0 0.0 0.0 6.132842744737312 0.0 11 0.0 0.0 0.0 6.940063926517593 0.0 12 0.0 0.0 0.0 8.720741706427726 0.0 13 0.0 0.0 0.0 9.035741938045543 0.0 14 0.0 0.0 0.0 9.19072734612305 0.0 15 0.0 0.0 0.0 9.54053642686502 0.0 16 0.0 0.0 0.0 9.918536704806401 0.0 17 0.0 0.0 0.0 10.355831143993488 0.0 18 0.0 0.0 0.0 10.806890299184044 0.0 19 0.0 0.0 0.0 11.694582128369213 0.0 20 1.3235303849488126E-4 0.0 0.0 12.114405966474976 0.0 21 1.3235303849488126E-4 0.0 0.0 12.668435785614548 0.0 22 1.3235303849488126E-4 0.0 0.0 13.272097994189702 0.0 23 1.3235303849488126E-4 0.0 0.0 13.840157235409732 0.0 24 1.3235303849488126E-4 0.0 0.0 14.323775238070027 0.0 25 1.3235303849488126E-4 0.0 0.0 14.732084361826736 0.0 26 1.3235303849488126E-4 0.0 0.0 15.176393512054053 0.0 27 1.3235303849488126E-4 0.0 0.0 15.562202619266632 0.0 28 1.3235303849488126E-4 0.0 0.0 15.947349961286736 0.0 29 1.3235303849488126E-4 0.0 0.0 16.380806162357473 0.0 30 1.3235303849488126E-4 0.0 0.0 16.866144754518203 0.0 31 1.3235303849488126E-4 0.0 0.0 17.324748032902967 0.0 32 1.3235303849488126E-4 0.0 0.0 17.751189522933473 0.0 33 1.3235303849488126E-4 0.0 0.0 18.190998669851965 0.0 34 1.3235303849488126E-4 0.0 0.0 18.66349901727869 0.0 35 1.3235303849488126E-4 0.0 0.0 19.168955271290642 0.0 36 1.3235303849488126E-4 0.0 0.0 19.64966150710405 0.0 37 1.3235303849488126E-4 0.0 0.0 20.10495595952644 0.0 38 1.3235303849488126E-4 0.0 0.0 20.614779863808725 0.0 39 1.3235303849488126E-4 0.0 0.0 21.31836861644751 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 25 3.889533E-5 45.0 1 CGAATCT 25 3.889533E-5 45.0 21 CGGTGAT 25 3.889533E-5 45.0 31 CCGCGTA 25 3.889533E-5 45.0 40 CGATCGA 40 6.8102963E-9 45.0 41 CGCTCGA 85 0.0 42.352943 41 TTTCGCG 240 0.0 42.187496 1 CCGATGA 2325 0.0 41.806454 18 CGATGAA 2345 0.0 41.449894 19 CATCGAA 350 0.0 41.142857 42 GATGAAT 2600 0.0 41.105766 20 CCCATCG 345 0.0 41.086956 40 TCGAATG 275 0.0 40.909092 44 ATCGAAT 330 0.0 40.90909 43 CGTTTTT 1105 0.0 40.723984 1 CGTAAGC 100 0.0 40.5 43 CCGATCG 45 1.9268555E-8 40.0 40 GCTACGA 45 1.9268555E-8 40.0 10 CGATAAA 130 0.0 39.80769 19 TACGGCT 970 0.0 39.43299 7 >>END_MODULE